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CAN33_7000-T1, CAN33_7000-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_7000-T1
Unique NameCAN33_7000-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:2106546..2107684+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_7000-T1 ID=CAN33_7000-T1|Name=CAN33_7000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1139bp|location=Sequence derived from alignment at NKJJ01000019.1:2106546..2107684+ (Aspergillus niger FDAARGOS_311)
ATGCCTGAGTCTAGGTCATCCAAGCGTCAGCGCATCGGTCGCGCCTGTGA
TCAGTGTCGGCGTCGAAAGTCCAAATGCGACGGTGACCAGCCAGTCTGCG
CTATTTGCCGCTCGGCGGGCAGGACCTGCACGTATGAAAACATCAGTCGA
CATCGGGGATTGCAATCAGGATATGTTCGCAGTTTAGAGGTGGCTTTGGG
GCTTTTCCTCGAGCGGTTCCCTCGCGATGAGGATGCCTTGCGACGCTTCC
TGCGCGACCCTCAGTGCAAGAAGCAGCTACCGGCAAGTGACTTGGCGGAG
CGTGGGCGACAATCCAGGCTAGCCAAATACGTGTATCGAGTGCTGAATAG
AGACTCACAGGACGAGTCGAGTAGCGAGCTTGAAGACGATACTGGGCTTG
CACCACGGGGCTGCGACGTTGGTAACCATGGGGAAGAGGAAGGAGAGCGC
ACTGCCCAGGCAAGAAGTGCCCCTGGCGAGCGGATATCTCAGGTTGTCTC
GGTGGAATATCTCAATCAGCCCATCCCAGATAATACCAATCAGCTTCTGC
AGTTCTATTTACCCATATCCACAGCTGGTTTCCTATCATCGAGCGCCGGG
ACGTCCTCCGCGTCATGCACACCCCTCCCGATGCGTCATGGTCGGCTCGA
GACGCTGCCTGTCGTCTCGTGTTGTGGGCAATCGTCGCCTATTCATTGGC
AACGGACGACACACTAGGCCGCGGCAGTCAGGTCGATCCAACACAAGTTG
CTCAATCTATCAGATCGCAAGTCCTGAGGGACATTGACCGGCTGCAGCTT
GGCCATCTTCAATCTCTGTTGATCATCACGCTTCTGTACTTGGGGGTGGG
CCATCTGCGTCTGGCATGGGTACTGGTTGGCGAAGCCACCAGGATGCTCG
AGATGCTTCCGGAATCTGCCAGGTGCGCTCGCTACCTACACATCCGGCAT
GGATGCATCTTGATCGACAATCTTACCTCGGCAATTCTGGAAAAAGCTCC
CTGTGCCTCGCTTGATGACCTGCGACAGTGTGCCTTAGTGAGCGAGGACG
ATGTGGACGAATGGGAGCTGTGGTCTATGCTGCGACCTGACCAGGCTTCA
GGAGGCAGTGTAGTCGCCAAAGGCCCTTGCGAGCTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:2106546..2107684+

>CAN33_7000-T1 ID=CAN33_7000-T1|Name=CAN33_7000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2232bp|location=Sequence derived from alignment at NKJJ01000019.1:2106546..2107684+ (Aspergillus niger FDAARGOS_311)
ATGCCTGAGTCTAGGTCATCCAAGCGTCAGCGCATCGGTCGCGCCTGTGA
TCAGTGTCGGCGTCGAAAGTCCAAATGCGACGGTGACCAGCCAGTCTGCG
CTATTTGCCGCTCGGCGGGCAGGACCTGCACGTATGAAAACATCAGTCGA
CATCGGGGATTGCAATCAGGATATGTTCGCAGTTTAGAGGTGGCTTTGGG
GCTTTTCCTCGAGCGGTTCCCTCGCGATGAGGATGCCTTGCGACGCTTCC
TGCGCGACCCTCAGTGCAAGAAGCAGCTACCGGCAAGTGACTTGGCGGAG
CGTGGGCGACAATCCAGGCTAGCCAAATACGTGTATCGAGTGCTGAATAG
AGACTCACAGGACGAGTCGAGTAGCGAGCTTGAAGACGATACTGGGCTTG
CACCACGGGGCTGCGACGTTGGTAACCATGGGGAAGAGGAAGGAGAGCGC
ACTGCCCAGGCAAGAAGTGCCCCTGGCGAGCGGATATCTCAGGTTGTCTC
GGTGGAATATCTCAATCAGCCCATCCCAGATAATACCAATCAGCTTCTGC
ACTGGTTTCCTATCATCGAGCGCCGGGACGTCCTCCGCGTCATGCACACC
CCTCCCGATGCGTCATGGTCGGCTCGAGACGCTGCCTGTCGTCTCGTGTT
GTGGGCAATCGTCGCCTATTCATTGGCAACGGACGACACACTAGGCCGCG
GCAGTCAGGTCGATCCAACACAAGTTGCTCAATCTATCAGATCGCAAGTC
CTGAGGGACATTGACCGGCTGCAGCTTGGCCATCTTCAATCTCTGTTGAT
CATCACGCTTCTGTACTTGGGGGTGGGCCATCTGCGTCTGGCATGGGTAC
TGGTTGGCGAAGCCACCAGGATGCTCGAGATGCTTCCGGAATCTGCCAGG
TGCGCTCGCTACCTACACATCCGGCATGGATGCATCTTGATCGACAATCT
TACCTCGGCAATTCTGGAAAAAGCTCCCTGTGCCTCGCTTGATGACCTGC
GACAGTGTGCCTTAGTGAGCGAGGACGATGTGGACGAATGGGAGCTGTGG
TCTATGCTGCGACCTGACCAGGCTTCAGGAGGCAGTGTAGTCGCCAAAGG
CCCTTGCGAGCTCTAAATGCCTGAGTCTAGGTCATCCAAGCGTCAGCGCA
TCGGTCGCGCCTGTGATCAGTGTCGGCGTCGAAAGTCCAAATGCGACGGT
GACCAGCCAGTCTGCGCTATTTGCCGCTCGGCGGGCAGGACCTGCACGTA
TGAAAACATCAGTCGACATCGGGGATTGCAATCAGGATATGTTCGCAGTT
TAGAGGTGGCTTTGGGGCTTTTCCTCGAGCGGTTCCCTCGCGATGAGGAT
GCCTTGCGACGCTTCCTGCGCGACCCTCAGTGCAAGAAGCAGCTACCGGC
AAGTGACTTGGCGGAGCGTGGGCGACAATCCAGGCTAGCCAAATACGTGT
ATCGAGTGCTGAATAGAGACTCACAGGACGAGTCGAGTAGCGAGCTTGAA
GACGATACTGGGCTTGCACCACGGGGCTGCGACGTTGGTAACCATGGGGA
AGAGGAAGGAGAGCGCACTGCCCAGGCAAGAAGTGCCCCTGGCGAGCGGA
TATCTCAGGTTGTCTCGGTGGAATATCTCAATCAGCCCATCCCAGATAAT
ACCAATCAGCTTCTGCACTGGTTTCCTATCATCGAGCGCCGGGACGTCCT
CCGCGTCATGCACACCCCTCCCGATGCGTCATGGTCGGCTCGAGACGCTG
CCTGTCGTCTCGTGTTGTGGGCAATCGTCGCCTATTCATTGGCAACGGAC
GACACACTAGGCCGCGGCAGTCAGGTCGATCCAACACAAGTTGCTCAATC
TATCAGATCGCAAGTCCTGAGGGACATTGACCGGCTGCAGCTTGGCCATC
TTCAATCTCTGTTGATCATCACGCTTCTGTACTTGGGGGTGGGCCATCTG
CGTCTGGCATGGGTACTGGTTGGCGAAGCCACCAGGATGCTCGAGATGCT
TCCGGAATCTGCCAGGTGCGCTCGCTACCTACACATCCGGCATGGATGCA
TCTTGATCGACAATCTTACCTCGGCAATTCTGGAAAAAGCTCCCTGTGCC
TCGCTTGATGACCTGCGACAGTGTGCCTTAGTGAGCGAGGACGATGTGGA
CGAATGGGAGCTGTGGTCTATGCTGCGACCTGACCAGGCTTCAGGAGGCA
GTGTAGTCGCCAAAGGCCCTTGCGAGCTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_7000CAN33_7000Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7000-T1.exon1CAN33_7000-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_7000-T1.exon2CAN33_7000-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7000-T1.cdsCAN33_7000-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7000-T1CAN33_7000-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
ProductFungal Zn(2)-Cys(6) binuclear cluster domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:2106546..2107684 +
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