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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:2108617..2109621- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_7010-T1 ID=CAN33_7010-T1|Name=CAN33_7010-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1005bp|location=Sequence derived from alignment at NKJJ01000019.1:2108617..2109621- (Aspergillus niger FDAARGOS_311)
ATGCCTTGCAAACCTGCTATTGCGTCCATGTCCGTGGGCCGTGCCTGGGT
CCATTCTCTCCCCGAGAAGCTCTCCCAGATCGCCCAGGCCGGCTTCAAAG
GGGTGGAAATCTTCTACGAAGACCTAGAATACCTCGCCAAAGAAAAGGGA
GAACCGACAGAAGAGAATCTCCTGATTGCCGCCCGAGAAACCAAGGATAT
TTGTGACCGACACGGCCTTGAAGTGATTGGCTTGCAGCCGTTCCTGTTCT
ACGAAGGCCTGCTAGATCGAGACGTCCACCAACAAAAGATCGCCAAACTT
CATACCTGGTTCAAGATCATCAAGATTCTCGGTACCAATATCATCCAGAT
CCCGTCGAACTTTCAGCCCGATGGCATCTCAGGAGATCTTGATCTCATTG
TCTCCGACATGATCGAGGTGGCCGATCTGGGCCTGCAGCAAGAGCCCCCA
GTTCGCTTCGCATACGAGAGTCTCGCCTGGGGAACATATGTCTCGACATG
GGACACCATGTGGGAAATCATCCTACGGGTCGATCGCCCGAATTTTGGAT
GCTGTCTGGATACCTTCAACATCGCCGGTCGGGTGTGGGCCGATCCCGCC
AGTCCCTCGGGGACAGTCCCTGATGCTGATGCATTGCTAGCCCAGTCGTT
GGATCGCCTTGTGAAGACAATCGACGTGAAAAAGGTCTTTTATGTCCAGG
TTGTTGATGCAGAAAAGATGGGGCAGCCATTGGTCCCCGGCCATCCGTTC
CACGTCGACGGCCAGCCGGCACGCATGAACTGGAGCCGCAACGCGAGATT
GTTCCTGTATGAACAGGAAAAGGGCGGGTATCTCCCGGTAGTCGAGGTAG
CTCGGGTAATCCTGAAGGAGCTTGGATTCGAAGGATGGGTGTCGATGGAA
CTGTTCTCCAGAACCATGGCGGATCCGGATCCGACCGTGCCGCAGAGCCA
TTCCCAGCGAGGCATCCGGGCCTGGCAACAGTTGGCCAAGGAGTTAGATC
TATGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:2108617..2109621- >CAN33_7010-T1 ID=CAN33_7010-T1|Name=CAN33_7010-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1005bp|location=Sequence derived from alignment at NKJJ01000019.1:2108617..2109621- (Aspergillus niger FDAARGOS_311)
ATGCCTTGCAAACCTGCTATTGCGTCCATGTCCGTGGGCCGTGCCTGGGT
CCATTCTCTCCCCGAGAAGCTCTCCCAGATCGCCCAGGCCGGCTTCAAAG
GGGTGGAAATCTTCTACGAAGACCTAGAATACCTCGCCAAAGAAAAGGGA
GAACCGACAGAAGAGAATCTCCTGATTGCCGCCCGAGAAACCAAGGATAT
TTGTGACCGACACGGCCTTGAAGTGATTGGCTTGCAGCCGTTCCTGTTCT
ACGAAGGCCTGCTAGATCGAGACGTCCACCAACAAAAGATCGCCAAACTT
CATACCTGGTTCAAGATCATCAAGATTCTCGGTACCAATATCATCCAGAT
CCCGTCGAACTTTCAGCCCGATGGCATCTCAGGAGATCTTGATCTCATTG
TCTCCGACATGATCGAGGTGGCCGATCTGGGCCTGCAGCAAGAGCCCCCA
GTTCGCTTCGCATACGAGAGTCTCGCCTGGGGAACATATGTCTCGACATG
GGACACCATGTGGGAAATCATCCTACGGGTCGATCGCCCGAATTTTGGAT
GCTGTCTGGATACCTTCAACATCGCCGGTCGGGTGTGGGCCGATCCCGCC
AGTCCCTCGGGGACAGTCCCTGATGCTGATGCATTGCTAGCCCAGTCGTT
GGATCGCCTTGTGAAGACAATCGACGTGAAAAAGGTCTTTTATGTCCAGG
TTGTTGATGCAGAAAAGATGGGGCAGCCATTGGTCCCCGGCCATCCGTTC
CACGTCGACGGCCAGCCGGCACGCATGAACTGGAGCCGCAACGCGAGATT
GTTCCTGTATGAACAGGAAAAGGGCGGGTATCTCCCGGTAGTCGAGGTAG
CTCGGGTAATCCTGAAGGAGCTTGGATTCGAAGGATGGGTGTCGATGGAA
CTGTTCTCCAGAACCATGGCGGATCCGGATCCGACCGTGCCGCAGAGCCA
TTCCCAGCGAGGCATCCGGGCCTGGCAACAGTTGGCCAAGGAGTTAGATC
TATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036237 |
| DBxref | InterPro:IPR013022 |
| DBxref | PFAM:PF01261 |
| Product | Xylose isomerase-like TIM barrel family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:2108617..2109621 - |
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