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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:2109805..2110727- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_7015-T1 ID=CAN33_7015-T1|Name=CAN33_7015-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=923bp|location=Sequence derived from alignment at NKJJ01000019.1:2109805..2110727- (Aspergillus niger FDAARGOS_311)
ATGTCCTCTACTACCGACGACCCCCGCCGCTTCGCCTACCTTGTCGGCAT
TGGCGTAACCCACTCCATCGCTCCCCCAATGCATACCTACGCCTTCCAAA
GCATGGGCCACCCGTGGACCTTCATCGCACAAGAATGCCCGACCGTCGAA
GACGCAGTGGCTCTCTTCCGCCAGCCCACCTTCGCCGGCGGGGTGGTAAC
CATGCCCTACAAACGCACCATCATGGAGCATCTCGACGGACTAGACGAGT
ACGCTGTGCGCCTCCAAGCGTGCAATAACGTCTATCGCGCAGAAGATGGC
TCGCTGCGCGGAACGAACACCGACTGGCGCGGTATCAAGGGGTGTTTGCT
TTCTGCTGATCCGGAGGAGAAAGGGAGGGGTAAGGCCGCGGTGATTGTGG
GCGCGGGGGAGCATGTCGTGCGGCGGTGTATGCGCTGTATGAGGAGCTGG
GATGTACGCCTATCTACGTGGTGAATCGGGATGAGGAGGAAGTGAGGGTT
TTGAGGCAGGAAACGGAGAAGGAGTATGGGGAGGGGTTGAAGATGGTTCA
TGTTGAGAGGGTAGAGCAGGTTGCGGGTTTGTTGGAGAAGGCGGCGCCGG
GGTATATGGTTGGGACAGTTCCTGATGCGGAGCCGGTGACGGCGGAGGAG
AAGGAGGTGCATCGCATCGTGGAGGCGTTTTTGGATGCTCCTTTTAAGGG
GGTGTTGCTTGATATGTGCTTCAAGCCGAGACAGACAAGGTTTCTGAAGA
TGGCGGGACCGCGGGGGTGGGCTACGGTGGAGGGGACGGAGGTTATTGGA
CATCAGATGCCGGAGCAGTATCGGCTCTGGTGCGGGGAAGAGGAGAGACA
GAAGTTGTCGCTGGGTGGAGCGTGGTCTGTGCTGCGGAAAGCTGCAGAGG
AGAGTCCGGGTATTAACTTCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:2109805..2110727- >CAN33_7015-T1 ID=CAN33_7015-T1|Name=CAN33_7015-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1734bp|location=Sequence derived from alignment at NKJJ01000019.1:2109805..2110727- (Aspergillus niger FDAARGOS_311)
GAAACGGAGAAGGAGTATGGGGAGGGGTTGAAGATGGTTCATGTTGAGAG
GGTAGAGCAGGTTGCGGGTTTGTTGGAGAAGGCGGCGCCGGGGTATATGG
TTGGGACAGTTCCTGATGCGGAGCCGGTGACGGCGGAGGAGAAGGAGGTG
CATCGCATCGTGGAGGCGTTTTTGGATGCTCCTTTTAAGGGGGTGTTGCT
TGATATGTGCTTCAAGCCGAGACAGACAAGGTTTCTGAAGATGGCGGGAC
CGCGGGGGTGGGCTACGGTGGAGGGGACGGAGGTTATTGGACATCAGATG
CCGGAGCAGTATCGGCTCTGGTGCGGGGAAGAGGAGAGACAGAAGTTGTC
GCTGGGTGGAGCGTGGTCTGTGCTGCGGAAAGCTGCAGAGGAGAGTCCGG
GTATTAACTTCTAGATGTCCTCTACTACCGACGACCCCCGCCGCTTCGCC
TACCTTGTCGGCATTGGCGTAACCCACTCCATCGCTCCCCCAATGCATAC
CTACGCCTTCCAAAGCATGGGCCACCCGTGGACCTTCATCGCACAAGAAT
GCCCGACCGTCGAAGACGCAGTGGCTCTCTTCCGCCAGCCCACCTTCGCC
GGCGGGGTGGTAACCATGCCCTACAAACGCACCATCATGGAGCATCTCGA
CGGACTAGACGAGTACGCTGTGCGCCTCCAAGCGTGCAATAACGTCTATC
GCGCAGAAGATGGCTCGCTGCGCGGAACGAACACCGACTGGCGCGGTATC
AAGGGGTGTTTGCTTTCTGCTGATCCGGAGGAGAAAGGGAGGGGTAAGGC
CGCGGTGATTGTGGGCGCGGGGGAGCATGTCGTGCGGCGGTGTATGCGCT
GTATGAGGAGCTGGGATGAAACGGAGAAGGAGTATGGGGAGGGGTTGAAG
ATGGTTCATGTTGAGAGGGTAGAGCAGGTTGCGGGTTTGTTGGAGAAGGC
GGCGCCGGGGTATATGGTTGGGACAGTTCCTGATGCGGAGCCGGTGACGG
CGGAGGAGAAGGAGGTGCATCGCATCGTGGAGGCGTTTTTGGATGCTCCT
TTTAAGGGGGTGTTGCTTGATATGTGCTTCAAGCCGAGACAGACAAGGTT
TCTGAAGATGGCGGGACCGCGGGGGTGGGCTACGGTGGAGGGGACGGAGG
TTATTGGACATCAGATGCCGGAGCAGTATCGGCTCTGGTGCGGGGAAGAG
GAGAGACAGAAGTTGTCGCTGGGTGGAGCGTGGTCTGTGCTGCGGAAAGC
TGCAGAGGAGAGTCCGGGTATTAACTTCTAGATGTCCTCTACTACCGACG
ACCCCCGCCGCTTCGCCTACCTTGTCGGCATTGGCGTAACCCACTCCATC
GCTCCCCCAATGCATACCTACGCCTTCCAAAGCATGGGCCACCCGTGGAC
CTTCATCGCACAAGAATGCCCGACCGTCGAAGACGCAGTGGCTCTCTTCC
GCCAGCCCACCTTCGCCGGCGGGGTGGTAACCATGCCCTACAAACGCACC
ATCATGGAGCATCTCGACGGACTAGACGAGTACGCTGTGCGCCTCCAAGC
GTGCAATAACGTCTATCGCGCAGAAGATGGCTCGCTGCGCGGAACGAACA
CCGACTGGCGCGGTATCAAGGGGTGTTTGCTTTCTGCTGATCCGGAGGAG
AAAGGGAGGGGTAAGGCCGCGGTGATTGTGGGCGCGGGGGAGCATGTCGT
GCGGCGGTGTATGCGCTGTATGAGGAGCTGGGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013708 |
| DBxref | PFAM:PF08501 |
| Product | Shikimate dehydrogenase substrate binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:2109805..2110727 - |
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