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CAN33_7150-T1, CAN33_7150-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_7150-T1
Unique NameCAN33_7150-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:2179086..2179861-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_7150-T1 ID=CAN33_7150-T1|Name=CAN33_7150-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=776bp|location=Sequence derived from alignment at NKJJ01000019.1:2179086..2179861- (Aspergillus niger FDAARGOS_311)
ATGAAGCTCGTTTATCTCGGGGTAAGGAATGACGGATGTTAATCTGTTCA
TCGTGTCGGCTGTCTGACCCCGTTCATCTGGACAGATTCTCCAAAATGCT
CAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTC
GCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGA
CCGTGGCCGAACGGACGAAACAAGGACAAAGACAGGACATTCAAGAGCAA
GGCAAGTTGGCGTCCCTCGGGGTCGTCTTTTCACCCCCTCTGCGGCAGCC
CCTGACCGCCGGTCGCCTACAGATTTCACATTTCACGTCTACGCGCGAAC
CCAAGGCATCGCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGG
CTGCTCACCAGATCCTCTCGAAGATGCTGGATGAGTTCCTCTCCCTGAAC
CCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGAC
CTACATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGA
TTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAG
AGCGTATGTTCTGCGCGCATTACATGTGGGCAGAATGGTGCTAACTCCCC
AACCAGGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTC
GGAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGC
AGAATTCGTGCTGTGTGATCATGTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:2179086..2179861-

>CAN33_7150-T1 ID=CAN33_7150-T1|Name=CAN33_7150-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2124bp|location=Sequence derived from alignment at NKJJ01000019.1:2179086..2179861- (Aspergillus niger FDAARGOS_311)
GTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGG
GCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATT
CGTGCTGTGTGATCATGTGAATTTCACATTTCACGTCTACGCGCGAACCC
AAGGCATCGCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCT
GCTCACCAGATCCTCTCGAAGATGCTGGATGAGTTCCTCTCCCTGAACCC
GAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCT
ACATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATT
CAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAG
CATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCG
ATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATG
ACGATGTTCAATGAAGCTCGTTTATCTCGGGGTCCTCGAGCGCGGAGAGA
AGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAG
ATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATGTG
AATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCGGAGTGAT
TATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGA
AGATGCTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGT
GACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGA
CCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGA
CCAAGATCGTTTTGCATAAGACTATCGAGAGCATTCTCCAAAATGCTCAA
GCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTCGCG
CTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAATGAAGCTC
GTTTATCTCGGGGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTC
CAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGA
AGAAGCAGAATTCGTGCTGTGTGATCATGTGAATTTCACATTTCACGTCT
ACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTAGCGATAATGAGTAC
CCGTCCCTGGCTGCTCACCAGATCCTCTCGAAGATGCTGGATGAGTTCCT
CTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCT
CCCTCAAGACCTACATTCAGGCGTACCAGGACCCACACCAGGTGGATAGC
ATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAA
GACTATCGAGAGCATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCT
GCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCGTC
AGCGAATTCATGACGATGTTCAATGAAGCTCGTTTATCTCGGGGTCCTCG
AGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGT
GCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTG
TGTGATCATGTGAATTTCACATTTCACGTCTACGCGCGAACCCAAGGCAT
CGCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACC
AGATCCTCTCGAAGATGCTGGATGAGTTCCTCTCCCTGAACCCGAACGCC
GCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCA
GGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGG
AGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAGCATTCTC
CAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAG
CAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGT
TCAATGAAGCTCGTTTATCTCGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_7150CAN33_7150Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7150-T1CAN33_7150-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7150-T1.cdsCAN33_7150-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7150-T1.exon4CAN33_7150-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_7150-T1.exon3CAN33_7150-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_7150-T1.exon2CAN33_7150-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_7150-T1.exon1CAN33_7150-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264CP4
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR010908
DBxrefInterPro:IPR001388
DBxrefPFAM:PF00957
DBxrefPFAM:PF13774
ProductSynaptobrevin family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:2179086..2179861 -
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