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CAN33_7185-T1, CAN33_7185-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_7185-T1
Unique NameCAN33_7185-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:2202802..2204616+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_7185-T1 ID=CAN33_7185-T1|Name=CAN33_7185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1815bp|location=Sequence derived from alignment at NKJJ01000019.1:2202802..2204616+ (Aspergillus niger FDAARGOS_311)
ATGCCACCGCAAAAGCGCAAGGCATTAAGCAGTTCTGCCACCAATGGTGC
CTCGTCGCACACCAATAAACGCGAAAAGCCCGATCTTACACGTCCGCATC
CCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACTTCTAC
CCCCCTGAGATGTGCAACGAACGGTGCGAAGCGTACAATAACGGAACGCT
GGAACGACCCATCGAATCCCTACATAGGGCATACGAAGACACGTTCGATG
AACGTCAAAAAATCCGGCCCAATGCAGCCGTCGTTCACTGGTTCAAAACA
GATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAGGTTGC
GCGAGAACACAAACTGCCTCTCATCGGCTTGTATATTCTCTCTCCGGAGG
ACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGATGTTGCGA
ACACTAGAATTGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCTTTGTA
TATGGAAACGCAGGAAAAGAGGAATGATATTCCTCAAAGGATTATAGATC
TATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAATATGAA
GTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCAAGGAA
TGGCATACGATTTGAAGCCGCACATGATACATGCGTTGTCACTCCGGGCA
AGCTAGTCAGCCAACAGGGGAAGCAGTATGCCGTTTATAGTCCGTGGTTT
CGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAGGTCGC
GGACGAACCAGGGTCGAACCCCGGCGAAGCACGCAAGCACTTTAAGACCC
TCTTTGGCTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCTCGGAG
GAAGAAAAGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCATGAGGC
ACTCCGTAGGCTGGAGGCGTTTCTGGAGGAGAAAGCAAATGACTATGATG
ACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTCCCTAT
TTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTCCAGGCCCGCAA
AAAGAACAAAGGCCACTTAAATAGGAATCAGACCGGATATACGTCTTGGA
TTAGCGAAGTTGCCTGGCGAGATTTCTACAAGCATGTCCTGGTCCATTGG
CCATTTATCTGGTTCGTTTTCTCCATTTTGACTGACTGTCCGTATAAAGC
TGACCCGTCATCGTACAGTATGAACAAGTGCTTCAAACCTGAGTTCACAA
ACTTAGCGTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGGC
AAAACTGGCTATCCGATCGTCGACGCCGCCATGCGCCAAATTAAACACGC
CGCCTGGATGCACAATCGCACGCGCATGGTCGTTTCATCATTTCTTTCCA
AGGACCTTCTGATAGATTGGCGTCGAGGGGAGCGATATTTCATGGAAAAC
CTGATAGACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTC
TAGTACCGGGGTTGATCCCCAACCATATTTCCGGATCTTTAATCCTCTGC
GCCAGAGTGAGCGGTTTGATCCAGAAGGGGAGTATATTCGTCATTGGGTG
CCGGAGCTACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCG
AGGGGCTGGGGATATTGCTGAGAAGAATGGCTATCCAAGGCCGATAGTGG
ATCATTCTGAGAGTCGAGACCGTGCGTTGGAGAATTATAAAAAGGTTGCC
CAGGGCCGTTCATGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:2202802..2204616+

>CAN33_7185-T1 ID=CAN33_7185-T1|Name=CAN33_7185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3516bp|location=Sequence derived from alignment at NKJJ01000019.1:2202802..2204616+ (Aspergillus niger FDAARGOS_311)
ATGCCACCGCAAAAGCGCAAGGCATTAAGCAGTTCTGCCACCAATGGTGC
CTCGTCGCACACCAATAAACGCGAAAAGCCCGATCTTACACGTCCGCATC
CCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACTTCTAC
CCCCCTGAGATGTGCAACGAACGGTGCGAAGCGTACAATAACGGAACGCT
GGAACGACCCATCGAATCCCTACATAGGGCATACGAAGACACGTTCGATG
AACGTCAAAAAATCCGGCCCAATGCAGCCGTCGTTCACTGGTTCAAAACA
GATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAGGTTGC
GCGAGAACACAAACTGCCTCTCATCGGCTTGTATATTCTCTCTCCGGAGG
ACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGATGTTGCGA
ACACTAGAATTGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCTTTGTA
TATGGAAACGCAGGAAAAGAGGAATGATATTCCTCAAAGGATTATAGATC
TATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAATATGAA
GTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCAAGGAA
TGGCATACGATTTGAAGCCGCACATGATACATGCGTTGTCACTCCGGGCA
AGCTAGTCAGCCAACAGGGGAAGCAGTATGCCGTTTATAGTCCGTGGTTT
CGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAGGTCGC
GGACGAACCAGGGTCGAACCCCGGCGAAGCACGCAAGCACTTTAAGACCC
TCTTTGGCTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCTCGGAG
GAAGAAAAGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCATGAGGC
ACTCCGTAGGCTGGAGGCGTTTCTGGAGGAGAAAGCAAATGACTATGATG
ACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTCCCTAT
TTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTCCAGGCCCGCAA
AAAGAACAAAGGCCACTTAAATAGGAATCAGACCGGATATACGTCTTGGA
TTAGCGAAGTTGCCTGGCGAGATTTCTACAAGCATGTCCTGGTCCATTGG
CCATTTATCTGTATGAACAAGTGCTTCAAACCTGAGTTCACAAACTTAGC
GTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGGCAAAACTG
GCTATCCGATCGTCGACGCCGCCATGCGCCAAATTAAACACGCCGCCTGG
ATGCACAATCGCACGCGCATGGTCGTTTCATCATTTCTTTCCAAGGACCT
TCTGATAGATTGGCGTCGAGGGGAGCGATATTTCATGGAAAACCTGATAG
ACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTCTAGTACC
GGGGTTGATCCCCAACCATATTTCCGGATCTTTAATCCTCTGCGCCAGAG
TGAGCGGTTTGATCCAGAAGGGGAGTATATTCGTCATTGGGTGCCGGAGC
TACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCGAGGGGCT
GGGGATATTGCTGAGAAGAATGGCTATCCAAGGCCGATAGTGGATCATTC
TGAGAGTCGAGACCGTGCGTTGGAGAATTATAAAAAGGTTGCCCAGGGCC
GTTCATGAATGCCACCGCAAAAGCGCAAGGCATTAAGCAGTTCTGCCACC
AATGGTGCCTCGTCGCACACCAATAAACGCGAAAAGCCCGATCTTACACG
TCCGCATCCCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTG
ACTTCTACCCCCCTGAGATGTGCAACGAACGGTGCGAAGCGTACAATAAC
GGAACGCTGGAACGACCCATCGAATCCCTACATAGGGCATACGAAGACAC
GTTCGATGAACGTCAAAAAATCCGGCCCAATGCAGCCGTCGTTCACTGGT
TCAAAACAGATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATAT
CAGGTTGCGCGAGAACACAAACTGCCTCTCATCGGCTTGTATATTCTCTC
TCCGGAGGACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGA
TGTTGCGAACACTAGAATTGTTGCGGCGAGACTTGAGTGAGCTGGATATT
CCTTTGTATATGGAAACGCAGGAAAAGAGGAATGATATTCCTCAAAGGAT
TATAGATCTATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGG
AATATGAAGTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGC
GCAAGGAATGGCATACGATTTGAAGCCGCACATGATACATGCGTTGTCAC
TCCGGGCAAGCTAGTCAGCCAACAGGGGAAGCAGTATGCCGTTTATAGTC
CGTGGTTTCGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTT
GAGGTCGCGGACGAACCAGGGTCGAACCCCGGCGAAGCACGCAAGCACTT
TAAGACCCTCTTTGGCTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGC
TCTCGGAGGAAGAAAAGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAG
CATGAGGCACTCCGTAGGCTGGAGGCGTTTCTGGAGGAGAAAGCAAATGA
CTATGATGACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAA
GTCCCTATTTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTCCAG
GCCCGCAAAAAGAACAAAGGCCACTTAAATAGGAATCAGACCGGATATAC
GTCTTGGATTAGCGAAGTTGCCTGGCGAGATTTCTACAAGCATGTCCTGG
TCCATTGGCCATTTATCTGTATGAACAAGTGCTTCAAACCTGAGTTCACA
AACTTAGCGTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGG
CAAAACTGGCTATCCGATCGTCGACGCCGCCATGCGCCAAATTAAACACG
CCGCCTGGATGCACAATCGCACGCGCATGGTCGTTTCATCATTTCTTTCC
AAGGACCTTCTGATAGATTGGCGTCGAGGGGAGCGATATTTCATGGAAAA
CCTGATAGACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTT
CTAGTACCGGGGTTGATCCCCAACCATATTTCCGGATCTTTAATCCTCTG
CGCCAGAGTGAGCGGTTTGATCCAGAAGGGGAGTATATTCGTCATTGGGT
GCCGGAGCTACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCC
GAGGGGCTGGGGATATTGCTGAGAAGAATGGCTATCCAAGGCCGATAGTG
GATCATTCTGAGAGTCGAGACCGTGCGTTGGAGAATTATAAAAAGGTTGC
CCAGGGCCGTTCATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_7185CAN33_7185Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7185-T1.exon1CAN33_7185-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_7185-T1.exon2CAN33_7185-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7185-T1.cdsCAN33_7185-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7185-T1CAN33_7185-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036134
DBxrefInterPro:IPR036155
DBxrefInterPro:IPR018394
DBxrefInterPro:IPR005101
DBxrefInterPro:IPR006050
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR002081
DBxrefPFAM:PF03441
DBxrefPFAM:PF00875
ProductFAD binding domain of DNA photolyase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:2202802..2204616 +
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