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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:2298326..2300325- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_7320-T1 ID=CAN33_7320-T1|Name=CAN33_7320-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2000bp|location=Sequence derived from alignment at NKJJ01000019.1:2298326..2300325- (Aspergillus niger FDAARGOS_311)
ATGTCCGACACCTGTATTGTGTGCTTAGGAGACCTTGGCGAAAGCGCCAG
CGATCCTCTTGCCGTCGCCGCCGAGGCCGCGCCAAGACTTGACCTCGGGG
CAGAGGGCAAGTCGGCGGATACCTCTCTCAATCTCGATGGTGTAGATGGC
ACGGAGGATTCGGGTCAGATCGCTCAGCTCCTCCCTTGCGGGCATATCCT
GCACAATAACTGTCTGAAGCCCTGGGTCGAGCGAGCCAACAGCTGTCCGA
TATGTCGTCGGAGTTTCAACATGGTCGAACTAAGTGACCGCCCTGGTGGT
AAGTACTTGATAATTCCCCTTTCTATCTATTGATCTACCTACATTGATCA
TGGATGGTCTCTACTTCCCTCTGTGTCTGTTATATATCTCTCGATGTACT
GATCACTGGTTTTCCTTCAGGCCCCGTCACATCTTCCTATGCCGTGCAGG
ATCGAGTCCAGCAAGCAGAAGTCGACCCCTCGATGATAATCGAATATATA
GACGATGACTTCGCCGATTTCCAACCTTGTCCTATCTGTGGGGATGCAGA
CAATGAAGAGCTGCTTCTCCTTTGTGATGGCTGCGATGTACCCTCTCACA
CATATTGCGTTGGCCTCGATTCTGTCCCCACGGGTCCTTGGTACTGCGCA
CGGTGTGTGACGCAACGTCGTCTCGGGCGGTCTTCTGAGACTGCCGACTG
GTCTTCCCAGGCACCAGACAGGCGTGGTCGTCGCACAAGAGCACAGCGAC
GCAGACTGCAGAACAGAAACCAGCTCAACTCCCTACACTGGGCCCGCGTG
TGGCAATCTGTCTGGGATCACCTCAACCTCGACTTGGACTTTCCGTTCGA
TGATGACATGGCTGCGGAGCGCGCTCGACAAGAGCAACGCCGGGAAGAAG
CCCATCAGCGTGATTTCCGAGCCTGGCAACGTCGCTTTGAAGTTGCCGAA
CAACAGGGTGGTGGCAATCGGTTCCGAGACACTGCCGCTCTATTGGATAT
CGAGGCGCCTCGCCCTTCGCGGCCTCGCGTTCCGCGTGAGCCCACCCCGG
AGCCCGAGTCTCTTGAAGAGATGAGGGCCTGGAATGCTTTCGAGCGTGCC
CGCGAAATTGAGAATGACCCAAGCGCGGCCCGGAAACGTAAAGAACCTAC
ATTGTCGCCCTCTCCCGAGCCTACCGAACCTGAACGCAAGCTGAAGCGGC
CCCGGACACGGAGGGCTGAAGACCTGGCAGCTCGGGCTATGCAGAATGGC
GAGTCATCAAGAGCTGCTAGTGCGCAAGCCTCTGCTCGGATCAATGCTGA
GAGTTCGAGCGAACCGAGCTTCCTTCAGTCCCTTCTCAAGGAGGTGGAAG
AATCGTCCAACCCCAACGGGTTCACTTCTCATGGCGCTTCCGGTCAATCA
TCCATTGCACCCACCGATCATACGACCCCAGGCCCCTCCTCGCCTTCCAT
CTCACCTGCCCCGTCAAACCATTCTTCCCCGCGTCTATCTTCCGTCACAC
CGCCTCCAACCCTCCGAAGCAGGCCCATGTCTCCACTACAACTGGGGTCA
CCAGCAGATCCGTCCTCTCCACCCTTCTCGCCAGATGTGTCGCCGGCTGG
TTCCGCTCGCAGTGCCCAAGATGATCACACATCACAAGTCCCCACTCGCC
GCCCGAATCGTCGGATACCTCGCTCTGCCACTCGATCAGCAGCTATCCGA
TCCGACGATAGCTCGCCCAGTCGTCCCGGCTTGTCCCTTAAAGTCAAGTC
TGACATACAAAAGTTGGTCGGGTCATCGCTGAAGCCTTACTATCGTTCGA
AGACCATCACGAAAGAACAATACACAGAAATCAATCGCAATATATCTAGG
AAGCTGTACGAGCGTGCGGGCGACGTCGAAACGCTCGGGATCGGGGCCAA
AGCCACGCTGGCTACTGTGGCCAAGGACGAAGTGGAGAAGGCCATTGATG
CGTTGAAGCAACTAAATGACCTCAATGACTCTGTTGATGATAGTTCTTGA
back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:2298326..2300325- >CAN33_7320-T1 ID=CAN33_7320-T1|Name=CAN33_7320-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3756bp|location=Sequence derived from alignment at NKJJ01000019.1:2298326..2300325- (Aspergillus niger FDAARGOS_311)
GCCCCGTCACATCTTCCTATGCCGTGCAGGATCGAGTCCAGCAAGCAGAA
GTCGACCCCTCGATGATAATCGAATATATAGACGATGACTTCGCCGATTT
CCAACCTTGTCCTATCTGTGGGGATGCAGACAATGAAGAGCTGCTTCTCC
TTTGTGATGGCTGCGATGTACCCTCTCACACATATTGCGTTGGCCTCGAT
TCTGTCCCCACGGGTCCTTGGTACTGCGCACGGTGTGTGACGCAACGTCG
TCTCGGGCGGTCTTCTGAGACTGCCGACTGGTCTTCCCAGGCACCAGACA
GGCGTGGTCGTCGCACAAGAGCACAGCGACGCAGACTGCAGAACAGAAAC
CAGCTCAACTCCCTACACTGGGCCCGCGTGTGGCAATCTGTCTGGGATCA
CCTCAACCTCGACTTGGACTTTCCGTTCGATGATGACATGGCTGCGGAGC
GCGCTCGACAAGAGCAACGCCGGGAAGAAGCCCATCAGCGTGATTTCCGA
GCCTGGCAACGTCGCTTTGAAGTTGCCGAACAACAGGGTGGTGGCAATCG
GTTCCGAGACACTGCCGCTCTATTGGATATCGAGGCGCCTCGCCCTTCGC
GGCCTCGCGTTCCGCGTGAGCCCACCCCGGAGCCCGAGTCTCTTGAAGAG
ATGAGGGCCTGGAATGCTTTCGAGCGTGCCCGCGAAATTGAGAATGACCC
AAGCGCGGCCCGGAAACGTAAAGAACCTACATTGTCGCCCTCTCCCGAGC
CTACCGAACCTGAACGCAAGCTGAAGCGGCCCCGGACACGGAGGGCTGAA
GACCTGGCAGCTCGGGCTATGCAGAATGGCGAGTCATCAAGAGCTGCTAG
TGCGCAAGCCTCTGCTCGGATCAATGCTGAGAGTTCGAGCGAACCGAGCT
TCCTTCAGTCCCTTCTCAAGGAGGTGGAAGAATCGTCCAACCCCAACGGG
TTCACTTCTCATGGCGCTTCCGGTCAATCATCCATTGCACCCACCGATCA
TACGACCCCAGGCCCCTCCTCGCCTTCCATCTCACCTGCCCCGTCAAACC
ATTCTTCCCCGCGTCTATCTTCCGTCACACCGCCTCCAACCCTCCGAAGC
AGGCCCATGTCTCCACTACAACTGGGGTCACCAGCAGATCCGTCCTCTCC
ACCCTTCTCGCCAGATGTGTCGCCGGCTGGTTCCGCTCGCAGTGCCCAAG
ATGATCACACATCACAAGTCCCCACTCGCCGCCCGAATCGTCGGATACCT
CGCTCTGCCACTCGATCAGCAGCTATCCGATCCGACGATAGCTCGCCCAG
TCGTCCCGGCTTGTCCCTTAAAGTCAAGTCTGACATACAAAAGTTGGTCG
GGTCATCGCTGAAGCCTTACTATCGTTCGAAGACCATCACGAAAGAACAA
TACACAGAAATCAATCGCAATATATCTAGGAAGCTGTACGAGCGTGCGGG
CGACGTCGAAACGCTCGGGATCGGGGCCAAAGCCACGCTGGCTACTGTGG
CCAAGGACGAAGTGGAGAAGGCCATTGATGCGTTGAAGCAACTAAATGAC
CTCAATGACTCTGTTGATGATAGTTCTTGAATGTCCGACACCTGTATTGT
GTGCTTAGGAGACCTTGGCGAAAGCGCCAGCGATCCTCTTGCCGTCGCCG
CCGAGGCCGCGCCAAGACTTGACCTCGGGGCAGAGGGCAAGTCGGCGGAT
ACCTCTCTCAATCTCGATGGTGTAGATGGCACGGAGGATTCGGGTCAGAT
CGCTCAGCTCCTCCCTTGCGGGCATATCCTGCACAATAACTGTCTGAAGC
CCTGGGTCGAGCGAGCCAACAGCTGTCCGATATGTCGTCGGAGTTTCAAC
ATGGTCGAACTAAGTGACCGCCCTGGTGGCCCCGTCACATCTTCCTATGC
CGTGCAGGATCGAGTCCAGCAAGCAGAAGTCGACCCCTCGATGATAATCG
AATATATAGACGATGACTTCGCCGATTTCCAACCTTGTCCTATCTGTGGG
GATGCAGACAATGAAGAGCTGCTTCTCCTTTGTGATGGCTGCGATGTACC
CTCTCACACATATTGCGTTGGCCTCGATTCTGTCCCCACGGGTCCTTGGT
ACTGCGCACGGTGTGTGACGCAACGTCGTCTCGGGCGGTCTTCTGAGACT
GCCGACTGGTCTTCCCAGGCACCAGACAGGCGTGGTCGTCGCACAAGAGC
ACAGCGACGCAGACTGCAGAACAGAAACCAGCTCAACTCCCTACACTGGG
CCCGCGTGTGGCAATCTGTCTGGGATCACCTCAACCTCGACTTGGACTTT
CCGTTCGATGATGACATGGCTGCGGAGCGCGCTCGACAAGAGCAACGCCG
GGAAGAAGCCCATCAGCGTGATTTCCGAGCCTGGCAACGTCGCTTTGAAG
TTGCCGAACAACAGGGTGGTGGCAATCGGTTCCGAGACACTGCCGCTCTA
TTGGATATCGAGGCGCCTCGCCCTTCGCGGCCTCGCGTTCCGCGTGAGCC
CACCCCGGAGCCCGAGTCTCTTGAAGAGATGAGGGCCTGGAATGCTTTCG
AGCGTGCCCGCGAAATTGAGAATGACCCAAGCGCGGCCCGGAAACGTAAA
GAACCTACATTGTCGCCCTCTCCCGAGCCTACCGAACCTGAACGCAAGCT
GAAGCGGCCCCGGACACGGAGGGCTGAAGACCTGGCAGCTCGGGCTATGC
AGAATGGCGAGTCATCAAGAGCTGCTAGTGCGCAAGCCTCTGCTCGGATC
AATGCTGAGAGTTCGAGCGAACCGAGCTTCCTTCAGTCCCTTCTCAAGGA
GGTGGAAGAATCGTCCAACCCCAACGGGTTCACTTCTCATGGCGCTTCCG
GTCAATCATCCATTGCACCCACCGATCATACGACCCCAGGCCCCTCCTCG
CCTTCCATCTCACCTGCCCCGTCAAACCATTCTTCCCCGCGTCTATCTTC
CGTCACACCGCCTCCAACCCTCCGAAGCAGGCCCATGTCTCCACTACAAC
TGGGGTCACCAGCAGATCCGTCCTCTCCACCCTTCTCGCCAGATGTGTCG
CCGGCTGGTTCCGCTCGCAGTGCCCAAGATGATCACACATCACAAGTCCC
CACTCGCCGCCCGAATCGTCGGATACCTCGCTCTGCCACTCGATCAGCAG
CTATCCGATCCGACGATAGCTCGCCCAGTCGTCCCGGCTTGTCCCTTAAA
GTCAAGTCTGACATACAAAAGTTGGTCGGGTCATCGCTGAAGCCTTACTA
TCGTTCGAAGACCATCACGAAAGAACAATACACAGAAATCAATCGCAATA
TATCTAGGAAGCTGTACGAGCGTGCGGGCGACGTCGAAACGCTCGGGATC
GGGGCCAAAGCCACGCTGGCTACTGTGGCCAAGGACGAAGTGGAGAAGGC
CATTGATGCGTTGAAGCAACTAAATGACCTCAATGACTCTGTTGATGATA
GTTCTTGAATGTCCGACACCTGTATTGTGTGCTTAGGAGACCTTGGCGAA
AGCGCCAGCGATCCTCTTGCCGTCGCCGCCGAGGCCGCGCCAAGACTTGA
CCTCGGGGCAGAGGGCAAGTCGGCGGATACCTCTCTCAATCTCGATGGTG
TAGATGGCACGGAGGATTCGGGTCAGATCGCTCAGCTCCTCCCTTGCGGG
CATATCCTGCACAATAACTGTCTGAAGCCCTGGGTCGAGCGAGCCAACAG
CTGTCCGATATGTCGTCGGAGTTTCAACATGGTCGAACTAAGTGACCGCC
CTGGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR011011 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR019787 |
| DBxref | InterPro:IPR001965 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF13639 |
| DBxref | PFAM:PF00097 |
| DBxref | PFAM:PF14447 |
| DBxref | PFAM:PF00628 |
| Product | PHD-finger family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:2298326..2300325 - |
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