You are here

Home

CAN33_7375-T1, CAN33_7375-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_7375-T1
Unique NameCAN33_7375-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:2322581..2323127-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_7375-T1 ID=CAN33_7375-T1|Name=CAN33_7375-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=547bp|location=Sequence derived from alignment at NKJJ01000019.1:2322581..2323127- (Aspergillus niger FDAARGOS_311)
ATGGTCTGCGCCAAATGCCAAAAGAAACTTAAACAAACGGAGCTCGCCAC
TCCCGGCGTGAAACGCAAAGCAGAAATGTACTATGGCTCACCATCCACAA
CGCTCGGCGGTAGTAGCAATAGCAGTGGTGCTGCTTTTGCCGGAGGGAAA
GCCAAGTCTAGTACGTTGGGGAGTACGGGGGTTGGGAAGGTATATCCATC
CATTTTATATTACTACTACTACTATATAACGTGATGATGAGGAGGAGGAT
GCTAATAATGTATAGAGCAAACTCCTCAGTTCTAAAGCTAAGAATCCCTA
CGCGGCGTATGCTTCCTCCTGTGAGGTTTGCAAGACCAAGACGGAGCAGG
GGAGGAAGTATTGTCAGCGTTGTGCGTATCAGAAGAATGGTTCGTCTTCT
TTCTTTTTACTTTCTTCTTGTTGTTTCGTATGTTTGGAGTCATCTAGCTA
ACGCTGTGTAGCGTGTCCGATGTGCGGGAAGGGGTTGACGGGGAGTGCGT
CGAAGAATCAGCCTGCGATTTCGGGACAGAAGTTTAATTTGAAGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:2322581..2323127-

>CAN33_7375-T1 ID=CAN33_7375-T1|Name=CAN33_7375-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1197bp|location=Sequence derived from alignment at NKJJ01000019.1:2322581..2323127- (Aspergillus niger FDAARGOS_311)
CGTGTCCGATGTGCGGGAAGGGGTTGACGGGGAGTGCGTCGAAGAATCAG
CCTGCGATTTCGGGACAGAAGTTTAATTTGAAGTAAAGCAAACTCCTCAG
TTCTAAAGCTAAGAATCCCTACGCGGCGTATGCTTCCTCCTGTGAGGTTT
GCAAGACCAAGACGGAGCAGGGGAGGAAGTATTGTCAGCGTTGTGCGTAT
CAGAAGAATGATGGTCTGCGCCAAATGCCAAAAGAAACTTAAACAAACGG
AGCTCGCCACTCCCGGCGTGAAACGCAAAGCAGAAATGTACTATGGCTCA
CCATCCACAACGCTCGGCGGTAGTAGCAATAGCAGTGGTGCTGCTTTTGC
CGGAGGGAAAGCCAAGTCTAGTACGTTGGGGAGTACGGGGGTTGGGAAGC
GTGTCCGATGTGCGGGAAGGGGTTGACGGGGAGTGCGTCGAAGAATCAGC
CTGCGATTTCGGGACAGAAGTTTAATTTGAAGTAAAGCAAACTCCTCAGT
TCTAAAGCTAAGAATCCCTACGCGGCGTATGCTTCCTCCTGTGAGGTTTG
CAAGACCAAGACGGAGCAGGGGAGGAAGTATTGTCAGCGTTGTGCGTATC
AGAAGAATGATGGTCTGCGCCAAATGCCAAAAGAAACTTAAACAAACGGA
GCTCGCCACTCCCGGCGTGAAACGCAAAGCAGAAATGTACTATGGCTCAC
CATCCACAACGCTCGGCGGTAGTAGCAATAGCAGTGGTGCTGCTTTTGCC
GGAGGGAAAGCCAAGTCTAGTACGTTGGGGAGTACGGGGGTTGGGAAGCG
TGTCCGATGTGCGGGAAGGGGTTGACGGGGAGTGCGTCGAAGAATCAGCC
TGCGATTTCGGGACAGAAGTTTAATTTGAAGTAAAGCAAACTCCTCAGTT
CTAAAGCTAAGAATCCCTACGCGGCGTATGCTTCCTCCTGTGAGGTTTGC
AAGACCAAGACGGAGCAGGGGAGGAAGTATTGTCAGCGTTGTGCGTATCA
GAAGAATGATGGTCTGCGCCAAATGCCAAAAGAAACTTAAACAAACGGAG
CTCGCCACTCCCGGCGTGAAACGCAAAGCAGAAATGTACTATGGCTCACC
ATCCACAACGCTCGGCGGTAGTAGCAATAGCAGTGGTGCTGCTTTTGCCG
GAGGGAAAGCCAAGTCTAGTACGTTGGGGAGTACGGGGGTTGGGAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_7375CAN33_7375Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7375-T1CAN33_7375-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7375-T1.cdsCAN33_7375-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7375-T1.exon3CAN33_7375-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_7375-T1.exon2CAN33_7375-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_7375-T1.exon1CAN33_7375-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019367
DBxrefPFAM:PF10235
ProductMicrotubule-associated protein CRIPT family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:2322581..2323127 -
Powered by Drupal