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CAN33_7385-T1, CAN33_7385-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_7385-T1
Unique NameCAN33_7385-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:2327608..2330379+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_7385-T1 ID=CAN33_7385-T1|Name=CAN33_7385-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2772bp|location=Sequence derived from alignment at NKJJ01000019.1:2327608..2330379+ (Aspergillus niger FDAARGOS_311)
ATGGCCAGCCAAATCTTCATTGAAACCCCCACTGTTGAGCAACACTTGAC
CGGCTTTGGCATTGGAACTGCTACTCCGCGTCTGTCATGGCGATTCCTCA
CCACCGACAGTAGCCCGCGTGACTGGGAACAGACAGCCTACGAAGTGCAA
CTTACTCGCTCCGGATCCTCAGCTAAAACCTACTATGTGAAGAGCAATGC
ATCGGTGCTGGTCCCTTGGCCCAGTGATCCATTACAATCCCGAGAAATCG
CACAGGTCCGCGTTCGGGCATACGGGTGCAGGGCCGGTGAGGAGCAACAG
GCCGAAGGAGCCACCTCTTGGTCTCCTTGGCGCGTCATTGAGTGCGGACT
ACTCGATCACACTGACTGGGTAGCCCGAACTATTGCCAATCCGGAGGAAC
CACAGCCGGAAGCTCCATTGCGGCCGGTGCGTTTCCGTAAGGAATTCCAA
CTTCCTGCGGCGAGTTCAGTCGACAAGGCCCGCCTCTATATCACCAGCTT
TGGGGTATACCGCGCTTTCGTCAACGGCCATCGAGTCGGAGATCAGTGCC
TCGCCCCCGGGTGGACTAGCTACCGCCATCGCTTGAACTACCAAGTGTTC
GATGTAGGACCCCTCCTGAATGCTGGAGGTCTCAACGTCCTCGCGGTAGA
GGTTGCAGAGGGATGGTACGCCACTCGCCTCGGCTTCCTTGGTGGGCGAA
GACAGCTGTATGGAGATCGGCTGGCCGTACTAGCCCAGGTGGAAATTCAA
CTCGGACCCAAGGGAGACCGATTCTCTATGTGTACCGATAGCACTTGGAT
TTGTACCCCCAGTGCCATCGTCCGCAGTGAGCTGTATGACGGCGAGGCTT
ATGATGCTCGTGAAGAAGATCCGACCTGGAACTGCGCGCGCCTTGACCAG
GCCTCTAGCTGGGTGGCCGTCCGTGAAATTGACTTCCCAACCGCGGCCTT
GGTAGCACCGGACGCTCCTCCAGTGCGTATCACCGAGGAGATTCCCCCAG
TCTCCGTTCAGAAGACCCCTTCCGGTGCAACCGTCATTGACTTCGGTCAG
AACCTGGTTGGTCGACTCCGCGTGCGCTCATTGCAAAAGCCCTCTGGGTC
TCGCGTCTCGTTCATCCACGCCGAAGTACTAGAGAATGGCGAGCTCGGGG
TTCGACCGCTACGACACGCCAAGTGCACCGATGAAGTCATCCTGAATGGA
ACAGAGCTCGTAGATTGGTCGCCACAGTATACATTTCATGGGTTTCGATA
CGTCCAGGTCAATGGTTGGGATGAGGAAATCGATGGATCACTGCTCCTCA
ATATCAAGGCCCTCGTGATGCACACTGATATGACCCGCAGCGGATGGTTT
TCTTGCTCCCACCCCATGATCAATCAACTCCACACCAATGCTTGGTGGAG
TATGCGGGGGAATTTCCTGTCCATCCCCACCGACTGTCCCCAGAGAGATG
AACGCCTCGGCTGGACCGGGGATATTCAGGTCTTCTGCCCATCGGCCAAC
TTCCTCTACAATACTGCCGGCATGCTGAGCGACTGGCTGCAGGATGTTGC
AGCCGAGCAGCTGAGGGAGAAGGATGGCTGCGTGCCTCCATTTACGGTCC
CTAACGTTATCAGCGAGACCCTGTGGCCGCATACGCCGCAGGCCGTGTGG
GACGATGTCGTGATCCTGACGCCCTGGGCCCTCTACCGGTCGTATGGAGA
CCAAGACATCCTCCGCCGCCAATATGAGAGCATGCTCGCCTGGATCGATC
GCGGAATCCGTCGTGGTTCGGATGGACTCTGGGACCCTGAACTTTGGCAA
CTGGGAGACTGGCTAGATCCAACAGCGCCGCCCGAGGAACCTGGGGATGC
ACGCACCAGTGGAACCCTCGTCGCTGATGCCTATCTCGTGCATATCACGT
CTGTGATGTCCGAGGTCAGTCAGGTCCTCGGCCAGAGCCAGAATGCCGCA
CGATTCCAGGCGGACTATGATCGACTCAAGGCAAGCTTCCAGGCCAAGTA
TATCACAGCCACTGGGTTGCTGGTCGGTGATACCCAAACGGCACTTAGCC
TTGCCATCGTGTACGACCTCCACTCCACTCCCGAAGCAGCCCAGGCTGCG
GCATCGCGTCTCGTCCACCTCGTGCGGCTGGCCAAGTTTCGCGTCGCCAC
CGGGTTTGCGGGCACTCCGATCATAACGCATGCTCTCACCAAGAGCGGAT
ACCCCCAGATCGCCTACCGGATGCTGCTGGAGAAAAATCGCCCGTCGTGG
ATGTATCCCATCACCATGGGAGCGACGACCATGTGGGAGCGGTGGGACAG
CATGCTCCCCGACGGGACCATCAATCCTGGCGAGATGACCAGCTTCAATC
ACTACGCCCTGGGCTCCATCATCAACTGGCTGCACTCCACTGTGGCCGGC
GTCAGCCCTCTATCCCCGGGCTGGAAGCAGATCCAGGTGGCTCCGACTCC
TGGGCCCACGATTCACTCGGCTGAAGCCATGTACGATACTCCCTATGGGC
GACTGGAATGCCGGTGGTCGATCGAGATTGACGCGGACCTCTTCCATATG
GACCTGTTGATACCCCCTAATTCTCGTGCGCGCGTGGTATTGCCGACACC
CAAGAAGCTATCCCAGCCCGCTGGTTCTCGTGAAGACGGAGATGATCTCT
GGGTGGGTTCGGGACATCACCATTTCTCTGCCCCCTTCGAGTGGAGGAAG
TACACTAGGGAATGGCCACCGAAGCCCCTGATTCCAATTATGCGCAAGCC
TGAACCGGAGGATATTGCCTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:2327608..2330379+

>CAN33_7385-T1 ID=CAN33_7385-T1|Name=CAN33_7385-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2772bp|location=Sequence derived from alignment at NKJJ01000019.1:2327608..2330379+ (Aspergillus niger FDAARGOS_311)
ATGGCCAGCCAAATCTTCATTGAAACCCCCACTGTTGAGCAACACTTGAC
CGGCTTTGGCATTGGAACTGCTACTCCGCGTCTGTCATGGCGATTCCTCA
CCACCGACAGTAGCCCGCGTGACTGGGAACAGACAGCCTACGAAGTGCAA
CTTACTCGCTCCGGATCCTCAGCTAAAACCTACTATGTGAAGAGCAATGC
ATCGGTGCTGGTCCCTTGGCCCAGTGATCCATTACAATCCCGAGAAATCG
CACAGGTCCGCGTTCGGGCATACGGGTGCAGGGCCGGTGAGGAGCAACAG
GCCGAAGGAGCCACCTCTTGGTCTCCTTGGCGCGTCATTGAGTGCGGACT
ACTCGATCACACTGACTGGGTAGCCCGAACTATTGCCAATCCGGAGGAAC
CACAGCCGGAAGCTCCATTGCGGCCGGTGCGTTTCCGTAAGGAATTCCAA
CTTCCTGCGGCGAGTTCAGTCGACAAGGCCCGCCTCTATATCACCAGCTT
TGGGGTATACCGCGCTTTCGTCAACGGCCATCGAGTCGGAGATCAGTGCC
TCGCCCCCGGGTGGACTAGCTACCGCCATCGCTTGAACTACCAAGTGTTC
GATGTAGGACCCCTCCTGAATGCTGGAGGTCTCAACGTCCTCGCGGTAGA
GGTTGCAGAGGGATGGTACGCCACTCGCCTCGGCTTCCTTGGTGGGCGAA
GACAGCTGTATGGAGATCGGCTGGCCGTACTAGCCCAGGTGGAAATTCAA
CTCGGACCCAAGGGAGACCGATTCTCTATGTGTACCGATAGCACTTGGAT
TTGTACCCCCAGTGCCATCGTCCGCAGTGAGCTGTATGACGGCGAGGCTT
ATGATGCTCGTGAAGAAGATCCGACCTGGAACTGCGCGCGCCTTGACCAG
GCCTCTAGCTGGGTGGCCGTCCGTGAAATTGACTTCCCAACCGCGGCCTT
GGTAGCACCGGACGCTCCTCCAGTGCGTATCACCGAGGAGATTCCCCCAG
TCTCCGTTCAGAAGACCCCTTCCGGTGCAACCGTCATTGACTTCGGTCAG
AACCTGGTTGGTCGACTCCGCGTGCGCTCATTGCAAAAGCCCTCTGGGTC
TCGCGTCTCGTTCATCCACGCCGAAGTACTAGAGAATGGCGAGCTCGGGG
TTCGACCGCTACGACACGCCAAGTGCACCGATGAAGTCATCCTGAATGGA
ACAGAGCTCGTAGATTGGTCGCCACAGTATACATTTCATGGGTTTCGATA
CGTCCAGGTCAATGGTTGGGATGAGGAAATCGATGGATCACTGCTCCTCA
ATATCAAGGCCCTCGTGATGCACACTGATATGACCCGCAGCGGATGGTTT
TCTTGCTCCCACCCCATGATCAATCAACTCCACACCAATGCTTGGTGGAG
TATGCGGGGGAATTTCCTGTCCATCCCCACCGACTGTCCCCAGAGAGATG
AACGCCTCGGCTGGACCGGGGATATTCAGGTCTTCTGCCCATCGGCCAAC
TTCCTCTACAATACTGCCGGCATGCTGAGCGACTGGCTGCAGGATGTTGC
AGCCGAGCAGCTGAGGGAGAAGGATGGCTGCGTGCCTCCATTTACGGTCC
CTAACGTTATCAGCGAGACCCTGTGGCCGCATACGCCGCAGGCCGTGTGG
GACGATGTCGTGATCCTGACGCCCTGGGCCCTCTACCGGTCGTATGGAGA
CCAAGACATCCTCCGCCGCCAATATGAGAGCATGCTCGCCTGGATCGATC
GCGGAATCCGTCGTGGTTCGGATGGACTCTGGGACCCTGAACTTTGGCAA
CTGGGAGACTGGCTAGATCCAACAGCGCCGCCCGAGGAACCTGGGGATGC
ACGCACCAGTGGAACCCTCGTCGCTGATGCCTATCTCGTGCATATCACGT
CTGTGATGTCCGAGGTCAGTCAGGTCCTCGGCCAGAGCCAGAATGCCGCA
CGATTCCAGGCGGACTATGATCGACTCAAGGCAAGCTTCCAGGCCAAGTA
TATCACAGCCACTGGGTTGCTGGTCGGTGATACCCAAACGGCACTTAGCC
TTGCCATCGTGTACGACCTCCACTCCACTCCCGAAGCAGCCCAGGCTGCG
GCATCGCGTCTCGTCCACCTCGTGCGGCTGGCCAAGTTTCGCGTCGCCAC
CGGGTTTGCGGGCACTCCGATCATAACGCATGCTCTCACCAAGAGCGGAT
ACCCCCAGATCGCCTACCGGATGCTGCTGGAGAAAAATCGCCCGTCGTGG
ATGTATCCCATCACCATGGGAGCGACGACCATGTGGGAGCGGTGGGACAG
CATGCTCCCCGACGGGACCATCAATCCTGGCGAGATGACCAGCTTCAATC
ACTACGCCCTGGGCTCCATCATCAACTGGCTGCACTCCACTGTGGCCGGC
GTCAGCCCTCTATCCCCGGGCTGGAAGCAGATCCAGGTGGCTCCGACTCC
TGGGCCCACGATTCACTCGGCTGAAGCCATGTACGATACTCCCTATGGGC
GACTGGAATGCCGGTGGTCGATCGAGATTGACGCGGACCTCTTCCATATG
GACCTGTTGATACCCCCTAATTCTCGTGCGCGCGTGGTATTGCCGACACC
CAAGAAGCTATCCCAGCCCGCTGGTTCTCGTGAAGACGGAGATGATCTCT
GGGTGGGTTCGGGACATCACCATTTCTCTGCCCCCTTCGAGTGGAGGAAG
TACACTAGGGAATGGCCACCGAAGCCCCTGATTCCAATTATGCGCAAGCC
TGAACCGGAGGATATTGCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_7385CAN33_7385Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7385-T1.exon1CAN33_7385-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7385-T1.cdsCAN33_7385-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7385-T1CAN33_7385-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteCAZy:CBM67
NoteCAZy:GH78
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR013783
DBxrefInterPro:IPR016007
DBxrefInterPro:IPR008902
DBxrefInterPro:IPR035396
DBxrefInterPro:IPR035398
DBxrefInterPro:IPR013737
DBxrefInterPro:IPR012341
DBxrefPFAM:PF08531
DBxrefPFAM:PF17390
DBxrefPFAM:PF17389
DBxrefPFAM:PF05592
ProductBacterial alpha-L-rhamnosidase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:2327608..2330379 +
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