You are here

Home

CAN33_7495-T1, CAN33_7495-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_7495-T1
Unique NameCAN33_7495-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:2418970..2419971+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_7495-T1 ID=CAN33_7495-T1|Name=CAN33_7495-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1002bp|location=Sequence derived from alignment at NKJJ01000019.1:2418970..2419971+ (Aspergillus niger FDAARGOS_311)
ATGCGTCTCCTCAACAAGGTTGCTCTCGTCACAGGCTCGTCTTCGGGCAT
TGGACGGGCCATCGCTCTGCGTTATGCTCGGGAAGGAGCCAAGGTTGCCT
GTGCGGACATCACTCCGACTGCACGCTCGCCGGTGCCGAACGAACTAGAC
ATTACTACCCACGATGCGATCAGTCAAGAGGGCGGGCAGGCTTTCTTCCT
CCAAACGGATGTGGGCGATGCATCCCAGATGGAAAATGCAGTGCTGAAGA
CTGCACAACAGTTTGGTCGGTTGGATATGTATGTTCGTTGTAGAAGTCCC
CTTATCTCGGCAACCGAAACAACAGACAATCTATTCGCAGTATGGTCAAC
AATGCAGGGGTCTCTCTTGAATCTCGCACCCCGGCTCGCATCCACGAAAC
CACCAATGAACTGTACGACACTACCATGCGGATCAATACGCGCTCGGTCT
TTCTGGGCAGCAAGTACGCCATCACACAGATGCTGAAGCAGGATCCGCAT
CCTTCGGGCGATCGGGGATGGATCATCAATCTGTCATCCATTCTTGGGAT
CGTGGCAGCGACAGAGAATCGTAGGTCAACCCGTTCCAGATGCGACAAGG
TTGGTGACGATCATGCTAAGCTGTGATAGCATCTTACTGTGCCTCCAAGG
GGGCTGTCAGCAATCTCACGCGTCAGGTGGCGTTGGATTATGCGCGCGAT
CGCATTCATGCGAATGCTATTTGTCCGGGATGTAGGTCTCTTATCGTGTT
TGCAGATTGTTGACTGTTGACTCTATTGTGGGCGGTGACTGACTGACAAG
GGATGTAGATACCCGGACAGCCATCTATGAGGAGACAACGGAGTATATGC
ACGCCGCGGCGGACTTGATCCGACGACATCCCTTTAATGGGCCTGGATTA
CCGGATGACATTGCGCGGGTGGCGGTGGTGCTGGCGAGCGAGGATGCCAG
CTGGATGACGGGAGCCGTGGTTCCGGTTGATGGAGGGTATACTGCGCGGT
GA
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:2418970..2419971+

>CAN33_7495-T1 ID=CAN33_7495-T1|Name=CAN33_7495-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3216bp|location=Sequence derived from alignment at NKJJ01000019.1:2418970..2419971+ (Aspergillus niger FDAARGOS_311)
ATGCGTCTCCTCAACAAGGTTGCTCTCGTCACAGGCTCGTCTTCGGGCAT
TGGACGGGCCATCGCTCTGCGTTATGCTCGGGAAGGAGCCAAGGTTGCCT
GTGCGGACATCACTCCGACTGCACGCTCGCCGGTGCCGAACGAACTAGAC
ATTACTACCCACGATGCGATCAGTCAAGAGGGCGGGCAGGCTTTCTTCCT
CCAAACGGATGTGGGCGATGCATCCCAGATGGAAAATGCAGTGCTGAAGA
CTGCACAACAGTTTGGTCGGTTGGATATTATGGTCAACAATGCAGGGGTC
TCTCTTGAATCTCGCACCCCGGCTCGCATCCACGAAACCACCAATGAACT
GTACGACACTACCATGCGGATCAATACGCGCTCGGTCTTTCTGGGCAGCA
AGTACGCCATCACACAGATGCTGAAGCAGGATCCGCATCCTTCGGGCGAT
CGGGGATGGATCATCAATCTGTCATCCATTCTTGGGATCGTGGCAGCGAC
AGAGAATCCATCTTACTGTGCCTCCAAGGGGGCTGTCAGCAATCTCACGC
GTCAGGTGGCGTTGGATTATGCGCGCGATCGCATTCATGCGAATGCTATT
TGTCCGGGATATACCCGGACAGCCATCTATGAGGAGACAACGGAGTATAT
GCACGCCGCGGCGGACTTGATCCGACGACATCCCTTTAATGGGCCTGGAT
TACCGGATGACATTGCGCGGGTGGCGGTGGTGCTGGCGAGCGAGGATGCC
AGCTGGATGACGGGAGCCGTGGTTCCGGTTGATGGAGGGTATACTGCGCG
GTGAATGCGTCTCCTCAACAAGGTTGCTCTCGTCACAGGCTCGTCTTCGG
GCATTGGACGGGCCATCGCTCTGCGTTATGCTCGGGAAGGAGCCAAGGTT
GCCTGTGCGGACATCACTCCGACTGCACGCTCGCCGGTGCCGAACGAACT
AGACATTACTACCCACGATGCGATCAGTCAAGAGGGCGGGCAGGCTTTCT
TCCTCCAAACGGATGTGGGCGATGCATCCCAGATGGAAAATGCAGTGCTG
AAGACTGCACAACAGTTTGGTCGGTTGGATATTATGGTCAACAATGCAGG
GGTCTCTCTTGAATCTCGCACCCCGGCTCGCATCCACGAAACCACCAATG
AACTGTACGACACTACCATGCGGATCAATACGCGCTCGGTCTTTCTGGGC
AGCAAGTACGCCATCACACAGATGCTGAAGCAGGATCCGCATCCTTCGGG
CGATCGGGGATGGATCATCAATCTGTCATCCATTCTTGGGATCGTGGCAG
CGACAGAGAATCCATCTTACTGTGCCTCCAAGGGGGCTGTCAGCAATCTC
ACGCGTCAGGTGGCGTTGGATTATGCGCGCGATCGCATTCATGCGAATGC
TATTTGTCCGGGATATACCCGGACAGCCATCTATGAGGAGACAACGGAGT
ATATGCACGCCGCGGCGGACTTGATCCGACGACATCCCTTTAATGGGCCT
GGATTACCGGATGACATTGCGCGGGTGGCGGTGGTGCTGGCGAGCGAGGA
TGCCAGCTGGATGACGGGAGCCGTGGTTCCGGTTGATGGAGGGTATACTG
CGCGGTGAATGCGTCTCCTCAACAAGGTTGCTCTCGTCACAGGCTCGTCT
TCGGGCATTGGACGGGCCATCGCTCTGCGTTATGCTCGGGAAGGAGCCAA
GGTTGCCTGTGCGGACATCACTCCGACTGCACGCTCGCCGGTGCCGAACG
AACTAGACATTACTACCCACGATGCGATCAGTCAAGAGGGCGGGCAGGCT
TTCTTCCTCCAAACGGATGTGGGCGATGCATCCCAGATGGAAAATGCAGT
GCTGAAGACTGCACAACAGTTTGGTCGGTTGGATATTATGGTCAACAATG
CAGGGGTCTCTCTTGAATCTCGCACCCCGGCTCGCATCCACGAAACCACC
AATGAACTGTACGACACTACCATGCGGATCAATACGCGCTCGGTCTTTCT
GGGCAGCAAGTACGCCATCACACAGATGCTGAAGCAGGATCCGCATCCTT
CGGGCGATCGGGGATGGATCATCAATCTGTCATCCATTCTTGGGATCGTG
GCAGCGACAGAGAATCCATCTTACTGTGCCTCCAAGGGGGCTGTCAGCAA
TCTCACGCGTCAGGTGGCGTTGGATTATGCGCGCGATCGCATTCATGCGA
ATGCTATTTGTCCGGGATATACCCGGACAGCCATCTATGAGGAGACAACG
GAGTATATGCACGCCGCGGCGGACTTGATCCGACGACATCCCTTTAATGG
GCCTGGATTACCGGATGACATTGCGCGGGTGGCGGTGGTGCTGGCGAGCG
AGGATGCCAGCTGGATGACGGGAGCCGTGGTTCCGGTTGATGGAGGGTAT
ACTGCGCGGTGAATGCGTCTCCTCAACAAGGTTGCTCTCGTCACAGGCTC
GTCTTCGGGCATTGGACGGGCCATCGCTCTGCGTTATGCTCGGGAAGGAG
CCAAGGTTGCCTGTGCGGACATCACTCCGACTGCACGCTCGCCGGTGCCG
AACGAACTAGACATTACTACCCACGATGCGATCAGTCAAGAGGGCGGGCA
GGCTTTCTTCCTCCAAACGGATGTGGGCGATGCATCCCAGATGGAAAATG
CAGTGCTGAAGACTGCACAACAGTTTGGTCGGTTGGATATTATGGTCAAC
AATGCAGGGGTCTCTCTTGAATCTCGCACCCCGGCTCGCATCCACGAAAC
CACCAATGAACTGTACGACACTACCATGCGGATCAATACGCGCTCGGTCT
TTCTGGGCAGCAAGTACGCCATCACACAGATGCTGAAGCAGGATCCGCAT
CCTTCGGGCGATCGGGGATGGATCATCAATCTGTCATCCATTCTTGGGAT
CGTGGCAGCGACAGAGAATCCATCTTACTGTGCCTCCAAGGGGGCTGTCA
GCAATCTCACGCGTCAGGTGGCGTTGGATTATGCGCGCGATCGCATTCAT
GCGAATGCTATTTGTCCGGGATATACCCGGACAGCCATCTATGAGGAGAC
AACGGAGTATATGCACGCCGCGGCGGACTTGATCCGACGACATCCCTTTA
ATGGGCCTGGATTACCGGATGACATTGCGCGGGTGGCGGTGGTGCTGGCG
AGCGAGGATGCCAGCTGGATGACGGGAGCCGTGGTTCCGGTTGATGGAGG
GTATACTGCGCGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_7495CAN33_7495Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7495-T1.exon1CAN33_7495-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_7495-T1.exon2CAN33_7495-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_7495-T1.exon3CAN33_7495-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_7495-T1.exon4CAN33_7495-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7495-T1.cdsCAN33_7495-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7495-T1CAN33_7495-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:2418970..2419971 +
Powered by Drupal