|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:2488238..2489362- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_7600-T1 ID=CAN33_7600-T1|Name=CAN33_7600-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1125bp|location=Sequence derived from alignment at NKJJ01000019.1:2488238..2489362- (Aspergillus niger FDAARGOS_311)
ATGAGTTTATCAACAACGACAGTCGAAAAACGGCTACTCGCAACTGCAGA
ACATCTCAATGCCTCTAATAAATTCCGTCCAGCGTCCGTTCCGTGGGTAC
ATCCCCATTTGGAGCAGGGCGTGGTGCCGATTAAAGGCCGCCAGCTGCGT
GCCTCGCAACCCATCCGAAAGGGCGAGCTCCTGATGATTGACGTGCCCTA
TGCGCTCATTCCCGTCGTCGATGATCCGGCCAGTAGCGATAGTCTCCTGT
GCAGCAATCCAACCTGTAGTCGTCAGACGCAGCACAGTTCGGGACGAATC
TCGTGTCCCAATCGCTGTCTCGCAGATGTAGTCTGGTGCAGTTCGACCTG
CCAGGAAGCTGATCAATTGCGCCATGAATTCGAGTGCACCTGGCTGCAGA
GATACGCCTCGCCCATCCGCGCAAAATGGGGCGAATACGACTTTGGCATG
ATGTGGCTGATTGTCCGCATCCTCGCCTCACGCCAAACGGAGCGACAGCA
GCTGCTTGATGCCAATAACGAAACGACTCAGCGTTTCAAGGGTGGCTGGG
AAGCCATCCAGTCCTTCTGTGGCTCGATAGAGAGCTGGTCACACGCCCAG
GTGCGATCATGGACAGCGTTGGTGAAGAAGTATCTTCGCAGTAGTCCGAT
CTTGCCACACGACCTAAGCGTTGACGAGATCGTGGCTCTGATCTGCCGGG
AGGAAGCCAACTCATTTGGCTTGTATCCGCGGGAGACGGGTGTATATCCT
GTTCCAGAACCCCCTGTCGACCGGGGAGAGCAGTTTGGTGCGGCCGTTTA
TCCTCGAGCAGCGATTGCTAACCATTCGTGCAGTCCTAATGTAAGAGCCT
CCAAGTCCACCCTTGACTATTAGCTAATATGACCGGTCCAGATCATGCAT
AAACCCGATCATCACGGACGAATGGTGTTTACTGCCTCGAAGGACATTGC
AGCCGGCGAGGAGTGCTGCATATCCTATTTCGACTTGAGCAAACGCGTCG
ACCTTAAGTCCCGTCGAGATCACCTTCAGGGTCTGTTCAGATTCGTCTGC
GGGTGTGACCGATGTACGGCTGAGGAGCCATCGGAAAAGGAGTCCGACTG
GGTTGGACTGCCTTTCTTGGAATAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:2488238..2489362- >CAN33_7600-T1 ID=CAN33_7600-T1|Name=CAN33_7600-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2148bp|location=Sequence derived from alignment at NKJJ01000019.1:2488238..2489362- (Aspergillus niger FDAARGOS_311)
ATCATGCATAAACCCGATCATCACGGACGAATGGTGTTTACTGCCTCGAA
GGACATTGCAGCCGGCGAGGAGTGCTGCATATCCTATTTCGACTTGAGCA
AACGCGTCGACCTTAAGTCCCGTCGAGATCACCTTCAGGGTCTGTTCAGA
TTCGTCTGCGGGTGTGACCGATGTACGGCTGAGGAGCCATCGGAAAAGGA
GTCCGACTGGGTTGGACTGCCTTTCTTGGAATAGATGAGTTTATCAACAA
CGACAGTCGAAAAACGGCTACTCGCAACTGCAGAACATCTCAATGCCTCT
AATAAATTCCGTCCAGCGTCCGTTCCGTGGGTACATCCCCATTTGGAGCA
GGGCGTGGTGCCGATTAAAGGCCGCCAGCTGCGTGCCTCGCAACCCATCC
GAAAGGGCGAGCTCCTGATGATTGACGTGCCCTATGCGCTCATTCCCGTC
GTCGATGATCCGGCCAGTAGCGATAGTCTCCTGTGCAGCAATCCAACCTG
TAGTCGTCAGACGCAGCACAGTTCGGGACGAATCTCGTGTCCCAATCGCT
GTCTCGCAGATGTAGTCTGGTGCAGTTCGACCTGCCAGGAAGCTGATCAA
TTGCGCCATGAATTCGAGTGCACCTGGCTGCAGAGATACGCCTCGCCCAT
CCGCGCAAAATGGGGCGAATACGACTTTGGCATGATGTGGCTGATTGTCC
GCATCCTCGCCTCACGCCAAACGGAGCGACAGCAGCTGCTTGATGCCAAT
AACGAAACGACTCAGCGTTTCAAGGGTGGCTGGGAAGCCATCCAGTCCTT
CTGTGGCTCGATAGAGAGCTGGTCACACGCCCAGGTGCGATCATGGACAG
CGTTGGTGAAGAAGTATCTTCGCAGTAGTCCGATCTTGCCACACGACCTA
AGCGTTGACGAGATCGTGGCTCTGATCTGCCGGGAGGAAGCCAACTCATT
TGGCTTGTATCCGCGGGAGACGGGTGTATATCCTGTTCCAGAACCCCCTG
TCGACCGGGGAGAGCAGTTTGGTGCGGCCGTTTATCCTCGAGCAGCGATT
GCTAACCATTCGTGCAGTCCTAATATCATGCATAAACCCGATCATCACGG
ACGAATGGTGTTTACTGCCTCGAAGGACATTGCAGCCGGCGAGGAGTGCT
GCATATCCTATTTCGACTTGAGCAAACGCGTCGACCTTAAGTCCCGTCGA
GATCACCTTCAGGGTCTGTTCAGATTCGTCTGCGGGTGTGACCGATGTAC
GGCTGAGGAGCCATCGGAAAAGGAGTCCGACTGGGTTGGACTGCCTTTCT
TGGAATAGATGAGTTTATCAACAACGACAGTCGAAAAACGGCTACTCGCA
ACTGCAGAACATCTCAATGCCTCTAATAAATTCCGTCCAGCGTCCGTTCC
GTGGGTACATCCCCATTTGGAGCAGGGCGTGGTGCCGATTAAAGGCCGCC
AGCTGCGTGCCTCGCAACCCATCCGAAAGGGCGAGCTCCTGATGATTGAC
GTGCCCTATGCGCTCATTCCCGTCGTCGATGATCCGGCCAGTAGCGATAG
TCTCCTGTGCAGCAATCCAACCTGTAGTCGTCAGACGCAGCACAGTTCGG
GACGAATCTCGTGTCCCAATCGCTGTCTCGCAGATGTAGTCTGGTGCAGT
TCGACCTGCCAGGAAGCTGATCAATTGCGCCATGAATTCGAGTGCACCTG
GCTGCAGAGATACGCCTCGCCCATCCGCGCAAAATGGGGCGAATACGACT
TTGGCATGATGTGGCTGATTGTCCGCATCCTCGCCTCACGCCAAACGGAG
CGACAGCAGCTGCTTGATGCCAATAACGAAACGACTCAGCGTTTCAAGGG
TGGCTGGGAAGCCATCCAGTCCTTCTGTGGCTCGATAGAGAGCTGGTCAC
ACGCCCAGGTGCGATCATGGACAGCGTTGGTGAAGAAGTATCTTCGCAGT
AGTCCGATCTTGCCACACGACCTAAGCGTTGACGAGATCGTGGCTCTGAT
CTGCCGGGAGGAAGCCAACTCATTTGGCTTGTATCCGCGGGAGACGGGTG
TATATCCTGTTCCAGAACCCCCTGTCGACCGGGGAGAGCAGTTTGGTGCG
GCCGTTTATCCTCGAGCAGCGATTGCTAACCATTCGTGCAGTCCTAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001214 |
| DBxref | PFAM:PF00856 |
| Product | SET domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:2488238..2489362 - |
|
