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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:2499291..2500150- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_7625-T1 ID=CAN33_7625-T1|Name=CAN33_7625-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=860bp|location=Sequence derived from alignment at NKJJ01000019.1:2499291..2500150- (Aspergillus niger FDAARGOS_311)
ATGTCTACCACTTCACCAACAGACAGAAAGAATGTCACTGATGCATTCGA
CATTGAGCGACAAGCATCTGTTACTGCAGCAGCAGTGCAAGTCGCACCCA
AGTCACTCGGTGCAGGCGTGAGTCACCATCCTCCATCCTGAAAAATCAGT
GATACACTAACGCATCTCATGTGTAGTCAGCACTAGCTCTAGGCGCATTC
GGCACGACTTTAACAACCCTATCCCTCAGTCTGATGGAATGGCGCGGCGT
AACCATCACCAACGTCTACGTGGGCAACTTCTTCTTCATCGCAGCATTCG
GACTTGTCATCACCGCGCAGTGGGAACTCTCCGTGGGGAATGGTTTCGCG
TACACGGTATTCAGCGCATTCGGTACATCTCCCTCATAGTCCCTATTACT
TTCCTTCAGAATAACGAAGCTAATCAGACTGATATTCCGAACAGGCCTCT
TCTACGCCGGCTACGGCGCGATCCTCACCCCAGCCTTTGGCGTAGCACAA
GCCTACGGATCCGACACAGCACAGTACAACAACGCGCTCGGGTTCTTCAT
GATATTATGGACAGTATTCGTGTTCGCGTTTCTCATAGCATCGCTACCGA
TTAATCTGGCAAATATTTTGGTTTTCTTCTTTGTGGACTTGGGGTTCTTG
ACTGTGGCGGCGAGTTACTTTGCTGATGCGGATGGACACGCTGAGTCGGC
GAGGGCATTGCGCAAGACAGGAGGGGCAAGTTGCTTTGTGGCGGGGATGG
TGGGGTGGTATATTGTGTTTCATTTGTTCCTGAAAGATAATAGTTTGCTG
GAGTTGCCGTTGGGGGACACGGGGAGGTATTTTGCGAAGAGCAGGAAGCG
AGAAGAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:2499291..2500150- >CAN33_7625-T1 ID=CAN33_7625-T1|Name=CAN33_7625-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2187bp|location=Sequence derived from alignment at NKJJ01000019.1:2499291..2500150- (Aspergillus niger FDAARGOS_311)
GCCTCTTCTACGCCGGCTACGGCGCGATCCTCACCCCAGCCTTTGGCGTA
GCACAAGCCTACGGATCCGACACAGCACAGTACAACAACGCGCTCGGGTT
CTTCATGATATTATGGACAGTATTCGTGTTCGCGTTTCTCATAGCATCGC
TACCGATTAATCTGGCAAATATTTTGGTTTTCTTCTTTGTGGACTTGGGG
TTCTTGACTGTGGCGGCGAGTTACTTTGCTGATGCGGATGGACACGCTGA
GTCGGCGAGGGCATTGCGCAAGACAGGAGGGGCAAGTTGCTTTGTGGCGG
GGATGGTGGGGTGGTATATTGTGTTTCATTTGTTCCTGAAAGATAATAGT
TTGCTGGAGTTGCCGTTGGGGGACACGGGGAGGTATTTTGCGAAGAGCAG
GAAGCGAGAAGAGTAGTCAGCACTAGCTCTAGGCGCATTCGGCACGACTT
TAACAACCCTATCCCTCAGTCTGATGGAATGGCGCGGCGTAACCATCACC
AACGTCTACGTGGGCAACTTCTTCTTCATCGCAGCATTCGGACTTGTCAT
CACCGCGCAGTGGGAACTCTCCGTGGGGAATGGTTTCGCGTACACGGTAT
TCAGCGCATTCGATGTCTACCACTTCACCAACAGACAGAAAGAATGTCAC
TGATGCATTCGACATTGAGCGACAAGCATCTGTTACTGCAGCAGCAGTGC
AAGTCGCACCCAAGTCACTCGGTGCAGGCGCCTCTTCTACGCCGGCTACG
GCGCGATCCTCACCCCAGCCTTTGGCGTAGCACAAGCCTACGGATCCGAC
ACAGCACAGTACAACAACGCGCTCGGGTTCTTCATGATATTATGGACAGT
ATTCGTGTTCGCGTTTCTCATAGCATCGCTACCGATTAATCTGGCAAATA
TTTTGGTTTTCTTCTTTGTGGACTTGGGGTTCTTGACTGTGGCGGCGAGT
TACTTTGCTGATGCGGATGGACACGCTGAGTCGGCGAGGGCATTGCGCAA
GACAGGAGGGGCAAGTTGCTTTGTGGCGGGGATGGTGGGGTGGTATATTG
TGTTTCATTTGTTCCTGAAAGATAATAGTTTGCTGGAGTTGCCGTTGGGG
GACACGGGGAGGTATTTTGCGAAGAGCAGGAAGCGAGAAGAGTAGTCAGC
ACTAGCTCTAGGCGCATTCGGCACGACTTTAACAACCCTATCCCTCAGTC
TGATGGAATGGCGCGGCGTAACCATCACCAACGTCTACGTGGGCAACTTC
TTCTTCATCGCAGCATTCGGACTTGTCATCACCGCGCAGTGGGAACTCTC
CGTGGGGAATGGTTTCGCGTACACGGTATTCAGCGCATTCGATGTCTACC
ACTTCACCAACAGACAGAAAGAATGTCACTGATGCATTCGACATTGAGCG
ACAAGCATCTGTTACTGCAGCAGCAGTGCAAGTCGCACCCAAGTCACTCG
GTGCAGGCGCCTCTTCTACGCCGGCTACGGCGCGATCCTCACCCCAGCCT
TTGGCGTAGCACAAGCCTACGGATCCGACACAGCACAGTACAACAACGCG
CTCGGGTTCTTCATGATATTATGGACAGTATTCGTGTTCGCGTTTCTCAT
AGCATCGCTACCGATTAATCTGGCAAATATTTTGGTTTTCTTCTTTGTGG
ACTTGGGGTTCTTGACTGTGGCGGCGAGTTACTTTGCTGATGCGGATGGA
CACGCTGAGTCGGCGAGGGCATTGCGCAAGACAGGAGGGGCAAGTTGCTT
TGTGGCGGGGATGGTGGGGTGGTATATTGTGTTTCATTTGTTCCTGAAAG
ATAATAGTTTGCTGGAGTTGCCGTTGGGGGACACGGGGAGGTATTTTGCG
AAGAGCAGGAAGCGAGAAGAGTAGTCAGCACTAGCTCTAGGCGCATTCGG
CACGACTTTAACAACCCTATCCCTCAGTCTGATGGAATGGCGCGGCGTAA
CCATCACCAACGTCTACGTGGGCAACTTCTTCTTCATCGCAGCATTCGGA
CTTGTCATCACCGCGCAGTGGGAACTCTCCGTGGGGAATGGTTTCGCGTA
CACGGTATTCAGCGCATTCGATGTCTACCACTTCACCAACAGACAGAAAG
AATGTCACTGATGCATTCGACATTGAGCGACAAGCATCTGTTACTGCAGC
AGCAGTGCAAGTCGCACCCAAGTCACTCGGTGCAGGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000791 |
| DBxref | PFAM:PF01184 |
| Product | GPR1/FUN34/yaaH family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:2499291..2500150 - |
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