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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:2500537..2501626- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_7630-T1 ID=CAN33_7630-T1|Name=CAN33_7630-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1090bp|location=Sequence derived from alignment at NKJJ01000019.1:2500537..2501626- (Aspergillus niger FDAARGOS_311)
ATGCATACTTCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGC
CGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTG
CTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACTTATTCCACCATC
GGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTA
CGTTGCCAGCGGCACGTATGAAGAGCAGTTGACCATTGACTACGCTGGCA
ACCTGACCCTGTACGGTGAGACTACCGACACCAGCACATACAAGGACAAT
GTGGTTACCATTACCCACACCATTTCGTCGCCGGATGCCGGCTCTCTCGA
CAAGAGCGCTACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACA
TCAACGTGGAGAATGGATATGGCGAGGGAGCACAGGCCGTAGCGTAAGCA
TGCCGATCTTCCCAATTCATTGAGATTGTTGGGCTAATGGCTTTGCTAGC
CTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGG
TTATCAAGACACTCTCTATGTCAAGGCCGGCACCCAGTATTACTCCAACT
GCATGATTGAGGGTCAGTATTTGTCCAAACAGCACAATTAGAACATTGAC
TAACTATTCCAGGCGCGGTCGACTACATCTTTGGCGATGCGTCCGTGTGG
TTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTC
ATCGCGCGAAACTTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCA
ACATCAAGGCTGCTTCAGGAGTCTCTCTCACGGAGGAGGTCTACCTGGGC
CGGCCGTGGCGCGTGCTGGCGCGGGTCATCTACCAGAACTCGGTGTTGTC
GGACATCATCAACCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGC
CGCTGTATTATGAATACAACAACTCTGGTGCGGGATCGGACACCTCTGAT
CGCGAATACGAGACCTCAATTTCTGCTGCGGTTGACAAGACCACGGTGCT
GGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:2500537..2501626- >CAN33_7630-T1 ID=CAN33_7630-T1|Name=CAN33_7630-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2952bp|location=Sequence derived from alignment at NKJJ01000019.1:2500537..2501626- (Aspergillus niger FDAARGOS_311)
GCGCGGTCGACTACATCTTTGGCGATGCGTCCGTGTGGTTCGGCGAATGT
GACATTGTGTCTAACGGCGCCGGTGCCATCACGGCCTCATCGCGCGAAAC
TTCCTCTGACTCAGGCTGGTACGCTATCGACAACTGCAACATCAAGGCTG
CTTCAGGAGTCTCTCTCACGGAGGAGGTCTACCTGGGCCGGCCGTGGCGC
GTGCTGGCGCGGGTCATCTACCAGAACTCGGTGTTGTCGGACATCATCAA
CCCCAAGGGATGGACGACCATGGCAGACGGTGCGACGCCGCTGTATTATG
AATACAACAACTCTGGTGCGGGATCGGACACCTCTGATCGCGAATACGAG
ACCTCAATTTCTGCTGCGGTTGACAAGACCACGGTGCTGGGCGAGACTTG
GGGAGACTGGATTGATCGGAGCTACTAACCTTGTCGGAAACGCAGATCAA
CTGGGCTTCTATGGATGCCAATTCAGTGGTTATCAAGACACTCTCTATGT
CAAGGCCGGCACCCAGTATTACTCCAACTGCATGATTGAGGATGCATACT
TCATATCTTCTGGGCGCCCTTGCCGCCCTGGCTGCTACCGCCGTCGGTGC
TCCGGCAGAGCACATCAAGAAGCGAGAGAGCCGGACGAGTGCTCCCTCAG
GGTGTCTGACGGTCGGATCGGATGGAACTTATTCCACCATCGGCGACGCG
CTTGACGCTCTAGGCTCATCCACTTCGTCCGCTTGCATTTACGTTGCCAG
CGGCACGTATGAAGAGCAGTTGACCATTGACTACGCTGGCAACCTGACCC
TGTACGGTGAGACTACCGACACCAGCACATACAAGGACAATGTGGTTACC
ATTACCCACACCATTTCGTCGCCGGATGCCGGCTCTCTCGACAAGAGCGC
TACCGTCAACGTGGTCTCGGATGGGTTCAGCATGTACAACATCAACGTGG
AGAATGGATATGGCGAGGGAGCACAGGCCGTAGCGCGCGGTCGACTACAT
CTTTGGCGATGCGTCCGTGTGGTTCGGCGAATGTGACATTGTGTCTAACG
GCGCCGGTGCCATCACGGCCTCATCGCGCGAAACTTCCTCTGACTCAGGC
TGGTACGCTATCGACAACTGCAACATCAAGGCTGCTTCAGGAGTCTCTCT
CACGGAGGAGGTCTACCTGGGCCGGCCGTGGCGCGTGCTGGCGCGGGTCA
TCTACCAGAACTCGGTGTTGTCGGACATCATCAACCCCAAGGGATGGACG
ACCATGGCAGACGGTGCGACGCCGCTGTATTATGAATACAACAACTCTGG
TGCGGGATCGGACACCTCTGATCGCGAATACGAGACCTCAATTTCTGCTG
CGGTTGACAAGACCACGGTGCTGGGCGAGACTTGGGGAGACTGGATTGAT
CGGAGCTACTAACCTTGTCGGAAACGCAGATCAACTGGGCTTCTATGGAT
GCCAATTCAGTGGTTATCAAGACACTCTCTATGTCAAGGCCGGCACCCAG
TATTACTCCAACTGCATGATTGAGGATGCATACTTCATATCTTCTGGGCG
CCCTTGCCGCCCTGGCTGCTACCGCCGTCGGTGCTCCGGCAGAGCACATC
AAGAAGCGAGAGAGCCGGACGAGTGCTCCCTCAGGGTGTCTGACGGTCGG
ATCGGATGGAACTTATTCCACCATCGGCGACGCGCTTGACGCTCTAGGCT
CATCCACTTCGTCCGCTTGCATTTACGTTGCCAGCGGCACGTATGAAGAG
CAGTTGACCATTGACTACGCTGGCAACCTGACCCTGTACGGTGAGACTAC
CGACACCAGCACATACAAGGACAATGTGGTTACCATTACCCACACCATTT
CGTCGCCGGATGCCGGCTCTCTCGACAAGAGCGCTACCGTCAACGTGGTC
TCGGATGGGTTCAGCATGTACAACATCAACGTGGAGAATGGATATGGCGA
GGGAGCACAGGCCGTAGCGCGCGGTCGACTACATCTTTGGCGATGCGTCC
GTGTGGTTCGGCGAATGTGACATTGTGTCTAACGGCGCCGGTGCCATCAC
GGCCTCATCGCGCGAAACTTCCTCTGACTCAGGCTGGTACGCTATCGACA
ACTGCAACATCAAGGCTGCTTCAGGAGTCTCTCTCACGGAGGAGGTCTAC
CTGGGCCGGCCGTGGCGCGTGCTGGCGCGGGTCATCTACCAGAACTCGGT
GTTGTCGGACATCATCAACCCCAAGGGATGGACGACCATGGCAGACGGTG
CGACGCCGCTGTATTATGAATACAACAACTCTGGTGCGGGATCGGACACC
TCTGATCGCGAATACGAGACCTCAATTTCTGCTGCGGTTGACAAGACCAC
GGTGCTGGGCGAGACTTGGGGAGACTGGATTGATCGGAGCTACTAACCTT
GTCGGAAACGCAGATCAACTGGGCTTCTATGGATGCCAATTCAGTGGTTA
TCAAGACACTCTCTATGTCAAGGCCGGCACCCAGTATTACTCCAACTGCA
TGATTGAGGATGCATACTTCATATCTTCTGGGCGCCCTTGCCGCCCTGGC
TGCTACCGCCGTCGGTGCTCCGGCAGAGCACATCAAGAAGCGAGAGAGCC
GGACGAGTGCTCCCTCAGGGTGTCTGACGGTCGGATCGGATGGAACTTAT
TCCACCATCGGCGACGCGCTTGACGCTCTAGGCTCATCCACTTCGTCCGC
TTGCATTTACGTTGCCAGCGGCACGTATGAAGAGCAGTTGACCATTGACT
ACGCTGGCAACCTGACCCTGTACGGTGAGACTACCGACACCAGCACATAC
AAGGACAATGTGGTTACCATTACCCACACCATTTCGTCGCCGGATGCCGG
CTCTCTCGACAAGAGCGCTACCGTCAACGTGGTCTCGGATGGGTTCAGCA
TGTACAACATCAACGTGGAGAATGGATATGGCGAGGGAGCACAGGCCGTA
GC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030599 | pectinesterase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042545 | cell wall modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:CE8 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR033131 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000070 |
| DBxref | PFAM:PF01095 |
| Product | Pectinesterase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:2500537..2501626 - |
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