You are here

Home

CAN33_7790-T1, CAN33_7790-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_7790-T1
Unique NameCAN33_7790-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:2592724..2593952-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_7790-T1 ID=CAN33_7790-T1|Name=CAN33_7790-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1229bp|location=Sequence derived from alignment at NKJJ01000019.1:2592724..2593952- (Aspergillus niger FDAARGOS_311)
ATGTCTGGTACAAGAGCCTATAACATCCTTGTCCTTCCCGGCGACGGCAT
CGGCCCGGAGGTCATGGCCGAAGCCATAAAGGTCCTGCGAACCTTTAACA
GTTCCTCCATGCAGTTCCACCTGCAAGAAGAACTCATTGGCGGGATCTCT
ATCGATACCCATGGTCATTCCGTCACGCAACCCGTCAAAGACGCTGCGGT
CGCTGCAGACGCTGTACTCTTCGCAGCAGTCGGGGGTCCCAAGTGGGATC
ATATCAGGCGCGGACTCGACGGGCCAGAGGGGGGTCTGTTACAGGTACGC
AAAGCCATGGACATATACGCAAATTTGAGACCGTGTTCAGTGGATGTACC
GAGTCGGGAAATTGCGAGGGACTTTTCACCTTTCAGGCAGGAGGTTATCG
AGGGGGTCGATTTTGTAGTGGTGCGGGAGAATTGTGGAGGGGCCTATTTT
GGCAAAAAGGTTGAGGAAGAGAATTATGGTAAATTCCATTCTACCGTGTA
AGCCAGAAAAGGTGGCTAGCATGATGCTCTAACACGAGTGCAGCAATGGA
TGAGTGGGGTTATTCCACCACCGAAATTCAACGCATTGCTCGTCTCGCTG
CAGAGCTTGCCCTGCGGCATGACCCGCCGTGGCCTGTGATTTCTCTTGAC
AAAGCCAATGTACTGGCCTCGTCGCGTCTGTGGCGTCGCGTTGTCGAGAA
CACAATTTCAGTAGAGTATCCACAAGTCAAATTGGTCCACCAGCTCGCAG
ATTCAGCATCATTGATCATGGCAACCGATCCACGAGTCCTCAACGGTGTG
ATTCTGGCAGACAATACCTTCGGAGACATGTTATCAGACCAGGCGGGGTC
ACTGATTGGAACATTAGGTGTCCTGCCTAGTGCCAGCTTGGATGGTCTTC
CTCATCCTGGCAAGCAGGAAAAGGTTCGCGGTCTATATGAACCAACGCAT
GGCTCTGCTCCGACGTATGTCTTTCTAGATGGCACGAATATACCATTGCT
GACATCTTGAAGAATAGCCGGTAAGAACATCGCGAATCCAACTGCGATGA
TCCTCTGTGTGAGCCTGATGTTCCGGTACTCTTTCAATATGGAGAACGAA
GCGCGCCAAATTGAGGATGCCGTGCGTGCCGTTTTGGATAGGGGACTTCG
CACTCCTGACCTTGGTGGAAATTCAAGCACTCAAGAGTTTGGAGACGCCG
TTGTTGCAGCACTGCAAGGGAAATATTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:2592724..2593952-

>CAN33_7790-T1 ID=CAN33_7790-T1|Name=CAN33_7790-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3348bp|location=Sequence derived from alignment at NKJJ01000019.1:2592724..2593952- (Aspergillus niger FDAARGOS_311)
AATAGCCGGTAAGAACATCGCGAATCCAACTGCGATGATCCTCTGTGTGA
GCCTGATGTTCCGGTACTCTTTCAATATGGAGAACGAAGCGCGCCAAATT
GAGGATGCCGTGCGTGCCGTTTTGGATAGGGGACTTCGCACTCCTGACCT
TGGTGGAAATTCAAGCACTCAAGAGTTTGGAGACGCCGTTGTTGCAGCAC
TGCAAGGGAAATATTAGCAATGGATGAGTGGGGTTATTCCACCACCGAAA
TTCAACGCATTGCTCGTCTCGCTGCAGAGCTTGCCCTGCGGCATGACCCG
CCGTGGCCTGTGATTTCTCTTGACAAAGCCAATGTACTGGCCTCGTCGCG
TCTGTGGCGTCGCGTTGTCGAGAACACAATTTCAGTAGAGTATCCACAAG
TCAAATTGGTCCACCAGCTCGCAGATTCAGCATCATTGATCATGGCAACC
GATCCACGAGTCCTCAACGGTGTGATTCTGGCAGACAATACCTTCGGAGA
CATGTTATCAGACCAGGCGGGGTCACTGATTGGAACATTAGGTGTCCTGC
CTAGTGCCAGCTTGGATGGTCTTCCTCATCCTGGCAAGCAGGAAAAGGTT
CGCGGTCTATATGAACCAACGCATGGCTCTGCTCCGACATGTCTGGTACA
AGAGCCTATAACATCCTTGTCCTTCCCGGCGACGGCATCGGCCCGGAGGT
CATGGCCGAAGCCATAAAGGTCCTGCGAACCTTTAACAGTTCCTCCATGC
AGTTCCACCTGCAAGAAGAACTCATTGGCGGGATCTCTATCGATACCCAT
GGTCATTCCGTCACGCAACCCGTCAAAGACGCTGCGGTCGCTGCAGACGC
TGTACTCTTCGCAGCAGTCGGGGGTCCCAAGTGGGATCATATCAGGCGCG
GACTCGACGGGCCAGAGGGGGGTCTGTTACAGGTACGCAAAGCCATGGAC
ATATACGCAAATTTGAGACCGTGTTCAGTGGATGTACCGAGTCGGGAAAT
TGCGAGGGACTTTTCACCTTTCAGGCAGGAGGTTATCGAGGGGGTCGATT
TTGTAGTGGTGCGGGAGAATTGTGGAGGGGCCTATTTTGGCAAAAAGGTT
GAGGAAGAGAATTATGAATAGCCGGTAAGAACATCGCGAATCCAACTGCG
ATGATCCTCTGTGTGAGCCTGATGTTCCGGTACTCTTTCAATATGGAGAA
CGAAGCGCGCCAAATTGAGGATGCCGTGCGTGCCGTTTTGGATAGGGGAC
TTCGCACTCCTGACCTTGGTGGAAATTCAAGCACTCAAGAGTTTGGAGAC
GCCGTTGTTGCAGCACTGCAAGGGAAATATTAGCAATGGATGAGTGGGGT
TATTCCACCACCGAAATTCAACGCATTGCTCGTCTCGCTGCAGAGCTTGC
CCTGCGGCATGACCCGCCGTGGCCTGTGATTTCTCTTGACAAAGCCAATG
TACTGGCCTCGTCGCGTCTGTGGCGTCGCGTTGTCGAGAACACAATTTCA
GTAGAGTATCCACAAGTCAAATTGGTCCACCAGCTCGCAGATTCAGCATC
ATTGATCATGGCAACCGATCCACGAGTCCTCAACGGTGTGATTCTGGCAG
ACAATACCTTCGGAGACATGTTATCAGACCAGGCGGGGTCACTGATTGGA
ACATTAGGTGTCCTGCCTAGTGCCAGCTTGGATGGTCTTCCTCATCCTGG
CAAGCAGGAAAAGGTTCGCGGTCTATATGAACCAACGCATGGCTCTGCTC
CGACATGTCTGGTACAAGAGCCTATAACATCCTTGTCCTTCCCGGCGACG
GCATCGGCCCGGAGGTCATGGCCGAAGCCATAAAGGTCCTGCGAACCTTT
AACAGTTCCTCCATGCAGTTCCACCTGCAAGAAGAACTCATTGGCGGGAT
CTCTATCGATACCCATGGTCATTCCGTCACGCAACCCGTCAAAGACGCTG
CGGTCGCTGCAGACGCTGTACTCTTCGCAGCAGTCGGGGGTCCCAAGTGG
GATCATATCAGGCGCGGACTCGACGGGCCAGAGGGGGGTCTGTTACAGGT
ACGCAAAGCCATGGACATATACGCAAATTTGAGACCGTGTTCAGTGGATG
TACCGAGTCGGGAAATTGCGAGGGACTTTTCACCTTTCAGGCAGGAGGTT
ATCGAGGGGGTCGATTTTGTAGTGGTGCGGGAGAATTGTGGAGGGGCCTA
TTTTGGCAAAAAGGTTGAGGAAGAGAATTATGAATAGCCGGTAAGAACAT
CGCGAATCCAACTGCGATGATCCTCTGTGTGAGCCTGATGTTCCGGTACT
CTTTCAATATGGAGAACGAAGCGCGCCAAATTGAGGATGCCGTGCGTGCC
GTTTTGGATAGGGGACTTCGCACTCCTGACCTTGGTGGAAATTCAAGCAC
TCAAGAGTTTGGAGACGCCGTTGTTGCAGCACTGCAAGGGAAATATTAGC
AATGGATGAGTGGGGTTATTCCACCACCGAAATTCAACGCATTGCTCGTC
TCGCTGCAGAGCTTGCCCTGCGGCATGACCCGCCGTGGCCTGTGATTTCT
CTTGACAAAGCCAATGTACTGGCCTCGTCGCGTCTGTGGCGTCGCGTTGT
CGAGAACACAATTTCAGTAGAGTATCCACAAGTCAAATTGGTCCACCAGC
TCGCAGATTCAGCATCATTGATCATGGCAACCGATCCACGAGTCCTCAAC
GGTGTGATTCTGGCAGACAATACCTTCGGAGACATGTTATCAGACCAGGC
GGGGTCACTGATTGGAACATTAGGTGTCCTGCCTAGTGCCAGCTTGGATG
GTCTTCCTCATCCTGGCAAGCAGGAAAAGGTTCGCGGTCTATATGAACCA
ACGCATGGCTCTGCTCCGACATGTCTGGTACAAGAGCCTATAACATCCTT
GTCCTTCCCGGCGACGGCATCGGCCCGGAGGTCATGGCCGAAGCCATAAA
GGTCCTGCGAACCTTTAACAGTTCCTCCATGCAGTTCCACCTGCAAGAAG
AACTCATTGGCGGGATCTCTATCGATACCCATGGTCATTCCGTCACGCAA
CCCGTCAAAGACGCTGCGGTCGCTGCAGACGCTGTACTCTTCGCAGCAGT
CGGGGGTCCCAAGTGGGATCATATCAGGCGCGGACTCGACGGGCCAGAGG
GGGGTCTGTTACAGGTACGCAAAGCCATGGACATATACGCAAATTTGAGA
CCGTGTTCAGTGGATGTACCGAGTCGGGAAATTGCGAGGGACTTTTCACC
TTTCAGGCAGGAGGTTATCGAGGGGGTCGATTTTGTAGTGGTGCGGGAGA
ATTGTGGAGGGGCCTATTTTGGCAAAAAGGTTGAGGAAGAGAATTATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009098leucine biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0051287NAD binding
GO:00038623-isopropylmalate dehydrogenase activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LEU2BCAN33_7790Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7790-T1CAN33_7790-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7790-T1.cdsCAN33_7790-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_7790-T1.exon3CAN33_7790-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_7790-T1.exon2CAN33_7790-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_7790-T1.exon1CAN33_7790-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000191.9
DBxrefInterPro:IPR019818
DBxrefInterPro:IPR004429
DBxrefInterPro:IPR024084
DBxrefPFAM:PF00180
Product3-isopropylmalate dehydrogenase B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:2592724..2593952 -
Powered by Drupal