|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:78860..79849- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_7960-T1 ID=CAN33_7960-T1|Name=CAN33_7960-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=990bp|location=Sequence derived from alignment at NKJJ01000012.1:78860..79849- (Aspergillus niger FDAARGOS_311)
ATGGGCTCCTCCGTCGCCGTCACCCCCCAGCCTCATATCCCCAAAGCCGG
CGTCTGGTGCCCCGCCGTGACCTTCTTCGATCACAGCACCGACACCATCG
ACCTCGATGCCCAAAAGAAATACTACCAGTACCTCTCGACCACCGGCCTC
GCTGGCCTCGTCATTCTCGGCACCAACTCCGAAGCCTTCCTCCTCACCCG
CGAAGAACGCGCCCAACTCATCGCCACGGCCCGTGCCGCCGTCGGCCCTG
ACTACCCCCTCATGGCTGGCTGCGGTGCCCACTCCACCAAGCAAGTGCTG
GAACTCGCCGAGGACGCCGCCGCTGCGGGCGCAAACTACATCCTTGTCCT
GCCCCCGGCATACTTCGGCAAAGCCACAACCCCGGCCGTCGTGAAGCGCT
TCTTCGCGGACGTCGCGCGCAAGAGTCCCCTGCCTGTCGTGGTGTACAAC
TTCCCGGGTGTCTGTAACGGCGTGGATCTGGATTCGGAGACCATCACCGC
CATCGTGCGCGAGTCGGCGGCATCGAGCACCAATGGGGTCTCGAACGTCG
TGGGTGTCAAGCTGACGTGTGGGTCGGTGGGCAAGATTACGAGGCTGGCG
GCCACTTTCTCCAAGGAGGAGTTTGCAATCTATGGTGGTCAGTCGGATTT
CCTGATCGGTGGCTTGGCTGCGGGCTCTGCTGGGTGCATTGCTGCTTTTG
CCAATGTGTTCCCAAAGACGGCATCGAAGATCTATGACCTTTATGTCGCT
GGTAAGATCCAGGAGGCAGTGGAGTTGCAGCGCCAGGCAGCGCTCGCGGA
GAGTCCTTGCAAGAGTGGAATTGCTGCCACCAAGTACGCGGCTGCGATCT
TCTCGGCTCGCGCGGCGGGCATTGAGGGGGCTGAGGAGAAGCTGAAGCCC
CGGACGCCGTATGAGGAACCGGCGGAGGGTGCGAAGAAGGGGGTGCAAGA
CTTGATGAGCGCCGTAGCCAAGGTCGAAGGAAGTATATAA back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:78860..79849- >CAN33_7960-T1 ID=CAN33_7960-T1|Name=CAN33_7960-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=990bp|location=Sequence derived from alignment at NKJJ01000012.1:78860..79849- (Aspergillus niger FDAARGOS_311)
ATGGGCTCCTCCGTCGCCGTCACCCCCCAGCCTCATATCCCCAAAGCCGG
CGTCTGGTGCCCCGCCGTGACCTTCTTCGATCACAGCACCGACACCATCG
ACCTCGATGCCCAAAAGAAATACTACCAGTACCTCTCGACCACCGGCCTC
GCTGGCCTCGTCATTCTCGGCACCAACTCCGAAGCCTTCCTCCTCACCCG
CGAAGAACGCGCCCAACTCATCGCCACGGCCCGTGCCGCCGTCGGCCCTG
ACTACCCCCTCATGGCTGGCTGCGGTGCCCACTCCACCAAGCAAGTGCTG
GAACTCGCCGAGGACGCCGCCGCTGCGGGCGCAAACTACATCCTTGTCCT
GCCCCCGGCATACTTCGGCAAAGCCACAACCCCGGCCGTCGTGAAGCGCT
TCTTCGCGGACGTCGCGCGCAAGAGTCCCCTGCCTGTCGTGGTGTACAAC
TTCCCGGGTGTCTGTAACGGCGTGGATCTGGATTCGGAGACCATCACCGC
CATCGTGCGCGAGTCGGCGGCATCGAGCACCAATGGGGTCTCGAACGTCG
TGGGTGTCAAGCTGACGTGTGGGTCGGTGGGCAAGATTACGAGGCTGGCG
GCCACTTTCTCCAAGGAGGAGTTTGCAATCTATGGTGGTCAGTCGGATTT
CCTGATCGGTGGCTTGGCTGCGGGCTCTGCTGGGTGCATTGCTGCTTTTG
CCAATGTGTTCCCAAAGACGGCATCGAAGATCTATGACCTTTATGTCGCT
GGTAAGATCCAGGAGGCAGTGGAGTTGCAGCGCCAGGCAGCGCTCGCGGA
GAGTCCTTGCAAGAGTGGAATTGCTGCCACCAAGTACGCGGCTGCGATCT
TCTCGGCTCGCGCGGCGGGCATTGAGGGGGCTGAGGAGAAGCTGAAGCCC
CGGACGCCGTATGAGGAACCGGCGGAGGGTGCGAAGAAGGGGGTGCAAGA
CTTGATGAGCGCCGTAGCCAAGGTCGAAGGAAGTATATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR002220 |
| DBxref | PFAM:PF00701 |
| Product | Dihydrodipicolinate synthetase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:78860..79849 - |
|
