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CAN33_8190-T1, CAN33_8190-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_8190-T1
Unique NameCAN33_8190-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:224750..225928+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_8190-T1 ID=CAN33_8190-T1|Name=CAN33_8190-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1179bp|location=Sequence derived from alignment at NKJJ01000012.1:224750..225928+ (Aspergillus niger FDAARGOS_311)
ATGACCAACTTCAAGTGGATCGTTGCCGCCGCCGGTCTCCTGTTTGGACA
GGTCCTGGCTGCTCCTACTGCCACTTCTACCCATGCCAAGCGCGCAACCG
TCAGCGACGTAAGCACCCTCCCTGTGAAGAACCCCACAGATATTGACATT
GGCAGGCTGCGTTCGGCTATGCTAGCCTGAACGGCGGCACCACCGGTGGT
GCCGGCGGTACTACCACTACCGTCTCGTCCTACGCTGCCTTCACCTCCGC
TGTCTCCGGCGATGACGCCAAGGTCGTCTACGTCGACGGCACCATCAAGC
AGACCGCCGACCAGGTCAAGATTGGCAGCAACACCTCCATCATCGGCAAG
GACGCCAACGCCATCCTCGAGGGATTCGGAGTGTAAGCACGTCCCAACAA
GAGGGAGCTGAATTAAGCTTACATGCAACAGTCTCGTCAAGGAGAAGGAG
AACGTTATCATCCGTAACCTCGGAGTCTCCAAGGTCCTTGCTGACAACGG
CGATGCCATTGGTGTCCGTACGTGACACCCACTCATCCTGCACACCCTAC
CAGATGCTAATTCAAGCAGAGTACTCCAACAACGTCTGGATCGACCACTG
CGATGTCTCCTCCGACCGTGACCACGACAAGGACTACTACGACGGTCTGA
TTGACGTATGCCACCCACCACCACCATCATACCAAAAGGGTCCTCACTCA
CTAACAACTACTAGATTACCCACGGCTCCGACTACGTGACCGTCTCCAAC
ACCTTCATCCACGACCACTGGAAGGCTTCCCTGGTCGGCCACTCCGATAG
CAACGAAGACGAGGACAGCGGCCACCTCACCGTCACCTACGCCAACAACT
ACTGGTACAACGTCAACTCCCGCGCTCCCTCTTTCCGCTTCGGTACCGGC
CACGTCTACAACAGCTACTACCTGGACGTCAGCGACGGCATCAACACCCG
TGACGGCGCCCAGCTGCTCGTCGAGTCCAACCAGTTCGTCGACTCCAAGA
AGGCTCTCTACTCCACCGACGATGGCTACGCCGTCTCCAACGACAACGAC
TTCGGTGATTCTGAGAACACTGCCGAGGAGGGTACCCTGACTTCCATGCC
TTATGACTACACCCTTCTTGGCTCCGCCAACGTTAAGGCTGCTGTCGTCG
GCACTGCCGGTCAGACTCTTACTTTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000012.1:224750..225928+

>CAN33_8190-T1 ID=CAN33_8190-T1|Name=CAN33_8190-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4860bp|location=Sequence derived from alignment at NKJJ01000012.1:224750..225928+ (Aspergillus niger FDAARGOS_311)
ATGACCAACTTCAAGTGGATCGTTGCCGCCGCCGGTCTCCTGTTTGGACA
GGTCCTGGCTGCTCCTACTGCCACTTCTACCCATGCCAAGCGCGCAACCG
TCAGCGACGCTGCGTTCGGCTATGCTAGCCTGAACGGCGGCACCACCGGT
GGTGCCGGCGGTACTACCACTACCGTCTCGTCCTACGCTGCCTTCACCTC
CGCTGTCTCCGGCGATGACGCCAAGGTCGTCTACGTCGACGGCACCATCA
AGCAGACCGCCGACCAGGTCAAGATTGGCAGCAACACCTCCATCATCGGC
AAGGACGCCAACGCCATCCTCGAGGGATTCGGAGTTCTCGTCAAGGAGAA
GGAGAACGTTATCATCCGTAACCTCGGAGTCTCCAAGGTCCTTGCTGACA
ACGGCGATGCCATTGGTGTCCAGTACTCCAACAACGTCTGGATCGACCAC
TGCGATGTCTCCTCCGACCGTGACCACGACAAGGACTACTACGACGGTCT
GATTGACATTACCCACGGCTCCGACTACGTGACCGTCTCCAACACCTTCA
TCCACGACCACTGGAAGGCTTCCCTGGTCGGCCACTCCGATAGCAACGAA
GACGAGGACAGCGGCCACCTCACCGTCACCTACGCCAACAACTACTGGTA
CAACGTCAACTCCCGCGCTCCCTCTTTCCGCTTCGGTACCGGCCACGTCT
ACAACAGCTACTACCTGGACGTCAGCGACGGCATCAACACCCGTGACGGC
GCCCAGCTGCTCGTCGAGTCCAACCAGTTCGTCGACTCCAAGAAGGCTCT
CTACTCCACCGACGATGGCTACGCCGTCTCCAACGACAACGACTTCGGTG
ATTCTGAGAACACTGCCGAGGAGGGTACCCTGACTTCCATGCCTTATGAC
TACACCCTTCTTGGCTCCGCCAACGTTAAGGCTGCTGTCGTCGGCACTGC
CGGTCAGACTCTTACTTTCTAAATGACCAACTTCAAGTGGATCGTTGCCG
CCGCCGGTCTCCTGTTTGGACAGGTCCTGGCTGCTCCTACTGCCACTTCT
ACCCATGCCAAGCGCGCAACCGTCAGCGACGCTGCGTTCGGCTATGCTAG
CCTGAACGGCGGCACCACCGGTGGTGCCGGCGGTACTACCACTACCGTCT
CGTCCTACGCTGCCTTCACCTCCGCTGTCTCCGGCGATGACGCCAAGGTC
GTCTACGTCGACGGCACCATCAAGCAGACCGCCGACCAGGTCAAGATTGG
CAGCAACACCTCCATCATCGGCAAGGACGCCAACGCCATCCTCGAGGGAT
TCGGAGTTCTCGTCAAGGAGAAGGAGAACGTTATCATCCGTAACCTCGGA
GTCTCCAAGGTCCTTGCTGACAACGGCGATGCCATTGGTGTCCAGTACTC
CAACAACGTCTGGATCGACCACTGCGATGTCTCCTCCGACCGTGACCACG
ACAAGGACTACTACGACGGTCTGATTGACATTACCCACGGCTCCGACTAC
GTGACCGTCTCCAACACCTTCATCCACGACCACTGGAAGGCTTCCCTGGT
CGGCCACTCCGATAGCAACGAAGACGAGGACAGCGGCCACCTCACCGTCA
CCTACGCCAACAACTACTGGTACAACGTCAACTCCCGCGCTCCCTCTTTC
CGCTTCGGTACCGGCCACGTCTACAACAGCTACTACCTGGACGTCAGCGA
CGGCATCAACACCCGTGACGGCGCCCAGCTGCTCGTCGAGTCCAACCAGT
TCGTCGACTCCAAGAAGGCTCTCTACTCCACCGACGATGGCTACGCCGTC
TCCAACGACAACGACTTCGGTGATTCTGAGAACACTGCCGAGGAGGGTAC
CCTGACTTCCATGCCTTATGACTACACCCTTCTTGGCTCCGCCAACGTTA
AGGCTGCTGTCGTCGGCACTGCCGGTCAGACTCTTACTTTCTAAATGACC
AACTTCAAGTGGATCGTTGCCGCCGCCGGTCTCCTGTTTGGACAGGTCCT
GGCTGCTCCTACTGCCACTTCTACCCATGCCAAGCGCGCAACCGTCAGCG
ACGCTGCGTTCGGCTATGCTAGCCTGAACGGCGGCACCACCGGTGGTGCC
GGCGGTACTACCACTACCGTCTCGTCCTACGCTGCCTTCACCTCCGCTGT
CTCCGGCGATGACGCCAAGGTCGTCTACGTCGACGGCACCATCAAGCAGA
CCGCCGACCAGGTCAAGATTGGCAGCAACACCTCCATCATCGGCAAGGAC
GCCAACGCCATCCTCGAGGGATTCGGAGTTCTCGTCAAGGAGAAGGAGAA
CGTTATCATCCGTAACCTCGGAGTCTCCAAGGTCCTTGCTGACAACGGCG
ATGCCATTGGTGTCCAGTACTCCAACAACGTCTGGATCGACCACTGCGAT
GTCTCCTCCGACCGTGACCACGACAAGGACTACTACGACGGTCTGATTGA
CATTACCCACGGCTCCGACTACGTGACCGTCTCCAACACCTTCATCCACG
ACCACTGGAAGGCTTCCCTGGTCGGCCACTCCGATAGCAACGAAGACGAG
GACAGCGGCCACCTCACCGTCACCTACGCCAACAACTACTGGTACAACGT
CAACTCCCGCGCTCCCTCTTTCCGCTTCGGTACCGGCCACGTCTACAACA
GCTACTACCTGGACGTCAGCGACGGCATCAACACCCGTGACGGCGCCCAG
CTGCTCGTCGAGTCCAACCAGTTCGTCGACTCCAAGAAGGCTCTCTACTC
CACCGACGATGGCTACGCCGTCTCCAACGACAACGACTTCGGTGATTCTG
AGAACACTGCCGAGGAGGGTACCCTGACTTCCATGCCTTATGACTACACC
CTTCTTGGCTCCGCCAACGTTAAGGCTGCTGTCGTCGGCACTGCCGGTCA
GACTCTTACTTTCTAAATGACCAACTTCAAGTGGATCGTTGCCGCCGCCG
GTCTCCTGTTTGGACAGGTCCTGGCTGCTCCTACTGCCACTTCTACCCAT
GCCAAGCGCGCAACCGTCAGCGACGCTGCGTTCGGCTATGCTAGCCTGAA
CGGCGGCACCACCGGTGGTGCCGGCGGTACTACCACTACCGTCTCGTCCT
ACGCTGCCTTCACCTCCGCTGTCTCCGGCGATGACGCCAAGGTCGTCTAC
GTCGACGGCACCATCAAGCAGACCGCCGACCAGGTCAAGATTGGCAGCAA
CACCTCCATCATCGGCAAGGACGCCAACGCCATCCTCGAGGGATTCGGAG
TTCTCGTCAAGGAGAAGGAGAACGTTATCATCCGTAACCTCGGAGTCTCC
AAGGTCCTTGCTGACAACGGCGATGCCATTGGTGTCCAGTACTCCAACAA
CGTCTGGATCGACCACTGCGATGTCTCCTCCGACCGTGACCACGACAAGG
ACTACTACGACGGTCTGATTGACATTACCCACGGCTCCGACTACGTGACC
GTCTCCAACACCTTCATCCACGACCACTGGAAGGCTTCCCTGGTCGGCCA
CTCCGATAGCAACGAAGACGAGGACAGCGGCCACCTCACCGTCACCTACG
CCAACAACTACTGGTACAACGTCAACTCCCGCGCTCCCTCTTTCCGCTTC
GGTACCGGCCACGTCTACAACAGCTACTACCTGGACGTCAGCGACGGCAT
CAACACCCGTGACGGCGCCCAGCTGCTCGTCGAGTCCAACCAGTTCGTCG
ACTCCAAGAAGGCTCTCTACTCCACCGACGATGGCTACGCCGTCTCCAAC
GACAACGACTTCGGTGATTCTGAGAACACTGCCGAGGAGGGTACCCTGAC
TTCCATGCCTTATGACTACACCCTTCTTGGCTCCGCCAACGTTAAGGCTG
CTGTCGTCGGCACTGCCGGTCAGACTCTTACTTTCTAAATGACCAACTTC
AAGTGGATCGTTGCCGCCGCCGGTCTCCTGTTTGGACAGGTCCTGGCTGC
TCCTACTGCCACTTCTACCCATGCCAAGCGCGCAACCGTCAGCGACGCTG
CGTTCGGCTATGCTAGCCTGAACGGCGGCACCACCGGTGGTGCCGGCGGT
ACTACCACTACCGTCTCGTCCTACGCTGCCTTCACCTCCGCTGTCTCCGG
CGATGACGCCAAGGTCGTCTACGTCGACGGCACCATCAAGCAGACCGCCG
ACCAGGTCAAGATTGGCAGCAACACCTCCATCATCGGCAAGGACGCCAAC
GCCATCCTCGAGGGATTCGGAGTTCTCGTCAAGGAGAAGGAGAACGTTAT
CATCCGTAACCTCGGAGTCTCCAAGGTCCTTGCTGACAACGGCGATGCCA
TTGGTGTCCAGTACTCCAACAACGTCTGGATCGACCACTGCGATGTCTCC
TCCGACCGTGACCACGACAAGGACTACTACGACGGTCTGATTGACATTAC
CCACGGCTCCGACTACGTGACCGTCTCCAACACCTTCATCCACGACCACT
GGAAGGCTTCCCTGGTCGGCCACTCCGATAGCAACGAAGACGAGGACAGC
GGCCACCTCACCGTCACCTACGCCAACAACTACTGGTACAACGTCAACTC
CCGCGCTCCCTCTTTCCGCTTCGGTACCGGCCACGTCTACAACAGCTACT
ACCTGGACGTCAGCGACGGCATCAACACCCGTGACGGCGCCCAGCTGCTC
GTCGAGTCCAACCAGTTCGTCGACTCCAAGAAGGCTCTCTACTCCACCGA
CGATGGCTACGCCGTCTCCAACGACAACGACTTCGGTGATTCTGAGAACA
CTGCCGAGGAGGGTACCCTGACTTCCATGCCTTATGACTACACCCTTCTT
GGCTCCGCCAACGTTAAGGCTGCTGTCGTCGGCACTGCCGGTCAGACTCT
TACTTTCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_8190CAN33_8190Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8190-T1CAN33_8190-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8190-T1.exon1CAN33_8190-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_8190-T1.exon2CAN33_8190-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_8190-T1.exon3CAN33_8190-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_8190-T1.exon4CAN33_8190-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_8190-T1.exon5CAN33_8190-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8190-T1.cdsCAN33_8190-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:PL1_4
NoteCAZy:PL1_8
NoteCAZy:PL1_11
NoteCAZy:PL1_1
NoteCAZy:PL1_12
NoteCAZy:PL1_6
NoteCAZy:PL1_5
NoteCAZy:PL1_10
NoteCAZy:PL1
NoteCAZy:PL1_9
NoteCAZy:PL1_7
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR002022
DBxrefPFAM:PF00544
ProductPectate lyase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:224750..225928 +
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