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CAN33_8345-T1, CAN33_8345-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_8345-T1
Unique NameCAN33_8345-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:311306..312173-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_8345-T1 ID=CAN33_8345-T1|Name=CAN33_8345-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=868bp|location=Sequence derived from alignment at NKJJ01000012.1:311306..312173- (Aspergillus niger FDAARGOS_311)
ATGGCTAATATGACAGAGGCTATTCACGATTACTATCCTTCTACGATCGA
CTTGCCTCATTATGTAACTAACGAGAGTTCGACCTTTTCACTGGTCGCTC
AATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGTCCATCATCATT
CGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTTGCATTTATCTG
GATGTGCTTCAGTAAGTCGTGTCATATTCTCTACTTCTGCATGGAACAAT
TATTGACGGAGGAAAATCAGCCGGATGCATACATCTATTTTTTGAAAGCT
ACTTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGC
CAACTCTGGAAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGA
TTCATTCCTTGTGTCTATGGAAGCAGTTACCGCTGTAAGTCCTTATATCC
AACACCCTGACACCTAATCAACTCATCATCAACTAACTTGTATAGTTTTG
CTGGGGCCCGCTCGCATTCCTCATTGCATACTGCATTGCCACACAGCATC
CAGCCCGACATGTCTTGCAGCTTATTGTCTCCGTAGGCCAGGTTTACGGA
GATGTGCTCTACTACGCTACGAGCATGTTCGACCTTTATTACCATGAAGT
GTCATTCTGTCGTCCGGAGGGCTACTATTTCTGGTTCTACTACGTTTTCA
AGAACTTTATCTGGCTTGCTGCTGGTTCTTGTGAGTTTATCAATACCTTG
CTGAGTGGGAACTGTGATTGCTAATCATATTGCAGATTTCGCGTACGAAA
GTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCGG
AAGCGGAAGGACTGTTAG
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Coding sequence (CDS) from alignment at NKJJ01000012.1:311306..312173-

>CAN33_8345-T1 ID=CAN33_8345-T1|Name=CAN33_8345-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2772bp|location=Sequence derived from alignment at NKJJ01000012.1:311306..312173- (Aspergillus niger FDAARGOS_311)
ATTTCGCGTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTA
AGCGCAATGGATCGGAAGCGGAAGGACTGTTAGTTTTGCTGGGGCCCGCT
CGCATTCCTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATG
TCTTGCAGCTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTAC
TACGCTACGAGCATGTTCGACCTTTATTACCATGAAGTGTCATTCTGTCG
TCCGGAGGGCTACTATTTCTGGTTCTACTACGTTTTCAAGAACTTTATCT
GGCTTGCTGCTGGTTCTTCCGGATGCATACATCTATTTTTTGAAAGCTAC
TTCGTGGTCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCA
ACTCTGGAAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATT
CATTCCTTGTGTCTATGGAAGCAGTTACCGCTATGGCTAATATGACAGAG
GCTATTCACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAAC
TAACGAGAGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGG
GTTTGGCCCTGGGTATAGCGTCCATCATCATTCGTCGTCCGCGAACACCG
GTGACTCAATCAGACCAGTTTGCATTTATCTGGATGTGCTTCAATTTCGC
GTACGAAAGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAA
TGGATCGGAAGCGGAAGGACTGTTAGTTTTGCTGGGGCCCGCTCGCATTC
CTCATTGCATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCA
GCTTATTGTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTA
CGAGCATGTTCGACCTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAG
GGCTACTATTTCTGGTTCTACTACGTTTTCAAGAACTTTATCTGGCTTGC
TGCTGGTTCTTCCGGATGCATACATCTATTTTTTGAAAGCTACTTCGTGG
TCTACCACAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGG
AAGGAATATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCT
TGTGTCTATGGAAGCAGTTACCGCTATGGCTAATATGACAGAGGCTATTC
ACGATTACTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAG
AGTTCGACCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGC
CCTGGGTATAGCGTCCATCATCATTCGTCGTCCGCGAACACCGGTGACTC
AATCAGACCAGTTTGCATTTATCTGGATGTGCTTCAATTTCGCGTACGAA
AGTGCGGTGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCG
GAAGCGGAAGGACTGTTAGTTTTGCTGGGGCCCGCTCGCATTCCTCATTG
CATACTGCATTGCCACACAGCATCCAGCCCGACATGTCTTGCAGCTTATT
GTCTCCGTAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCAT
GTTCGACCTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAGGGCTACT
ATTTCTGGTTCTACTACGTTTTCAAGAACTTTATCTGGCTTGCTGCTGGT
TCTTCCGGATGCATACATCTATTTTTTGAAAGCTACTTCGTGGTCTACCA
CAAGACCCTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGGAAGGAAT
ATTCCCTTTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCT
ATGGAAGCAGTTACCGCTATGGCTAATATGACAGAGGCTATTCACGATTA
CTATCCTTCTACGATCGACTTGCCTCATTATGTAACTAACGAGAGTTCGA
CCTTTTCACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGT
ATAGCGTCCATCATCATTCGTCGTCCGCGAACACCGGTGACTCAATCAGA
CCAGTTTGCATTTATCTGGATGTGCTTCAATTTCGCGTACGAAAGTGCGG
TGGAGATCACGCGTGGTATGAAAAAGTTAAGCGCAATGGATCGGAAGCGG
AAGGACTGTTAGTTTTGCTGGGGCCCGCTCGCATTCCTCATTGCATACTG
CATTGCCACACAGCATCCAGCCCGACATGTCTTGCAGCTTATTGTCTCCG
TAGGCCAGGTTTACGGAGATGTGCTCTACTACGCTACGAGCATGTTCGAC
CTTTATTACCATGAAGTGTCATTCTGTCGTCCGGAGGGCTACTATTTCTG
GTTCTACTACGTTTTCAAGAACTTTATCTGGCTTGCTGCTGGTTCTTCCG
GATGCATACATCTATTTTTTGAAAGCTACTTCGTGGTCTACCACAAGACC
CTAGCCGGCTCGCACACTTTATTCGGCCAACTCTGGAAGGAATATTCCCT
TTCTGACTCACGCTACCTGACCTCAGATTCATTCCTTGTGTCTATGGAAG
CAGTTACCGCTATGGCTAATATGACAGAGGCTATTCACGATTACTATCCT
TCTACGATCGACTTGCCTCATTATGTAACTAACGAGAGTTCGACCTTTTC
ACTGGTCGCTCAATTTGCTGTCCTTTGGGGTTTGGCCCTGGGTATAGCGT
CCATCATCATTCGTCGTCCGCGAACACCGGTGACTCAATCAGACCAGTTT
GCATTTATCTGGATGTGCTTCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0047750cholestenol delta-isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0016125sterol metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_8345CAN33_8345Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8345-T1CAN33_8345-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8345-T1.cdsCAN33_8345-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8345-T1.exon4CAN33_8345-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_8345-T1.exon3CAN33_8345-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_8345-T1.exon2CAN33_8345-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_8345-T1.exon1CAN33_8345-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR033118
DBxrefInterPro:IPR007905
DBxrefPFAM:PF05241
ProductEmopamil binding protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:311306..312173 -
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