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CAN33_8355-T1, CAN33_8355-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_8355-T1
Unique NameCAN33_8355-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:317215..318774+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_8355-T1 ID=CAN33_8355-T1|Name=CAN33_8355-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1560bp|location=Sequence derived from alignment at NKJJ01000012.1:317215..318774+ (Aspergillus niger FDAARGOS_311)
ATGTCGTCGCAAGATCCTCACCGCGCCGACGACGACGCCTACATTGAAGC
CGATGAAGCTGATGAGGTTATCAACCGCGATGAGGACCACCCCATGGAGT
CCGATGCCGAGGACGAGGATGGAGACCAGCCTATGAGCTACGAAGAACAA
GAAATCACTCTGGAGAATGACTCTTCCGCCCATTTCGATAGCCACAACGA
CTCCGTTTTCTGCATTGCCCAGCACCCCATCCACAACAACATCGTAATCA
CTGGCTCCGGAGACGATACCGCTTACATCTTCGATTCGACGCCTAATGAT
GAGCGCCCCGTCCTTCCCCCCAGCTACGAATCGGACCCGCAACCCAGGCG
CGAGCGGGATTCTCTTAAGCCCATCCTTAAGCTTGAGGGCCACGCCGACA
CCGTGAACGCCGTCGCATTCACAGAACCCAAGGGCGAGTTTGTTGTCACA
GCAGGAATGGATGGTAAGCTGCGTGCTTACCGCGACACTACCCCCCAGGG
AACCGGCCTCGCATGGCAGTTCCTCGCGGAGGTTCAAGAAGTGGAGGAGA
TCAACTGGGTTGCTGTCTGCCCTTGCGAGAAGGGCGACGAGGAGAAGAGC
AACATCATTGCTCTGGGTGCCAACGACGGTAGCGCTTGGGTGTTCCGCAT
CGACCCCAGGGACGCCGCGGCTCCTATCTCCATCATTCAGTCGTTCTTCC
AACACACCGGTTCTTGCACGGCGGGTGCCTGGACCCCCGATGGAAAGCTG
CTGGCGACCGTCTCCGAGGACGGTAGCTTCTACGTCTACGATGTCTTTGG
TGCCGCTGCCGCTGCTGGCGTCTCCTACTCCCCGGGTACTAGCGCTGTTG
TCGGTCTGACTGCGGAGGACCAGCGCTTCGCCGTCGAGGGTGGTCTGTAC
TCGATCGCCATCTCCCCGGGTGGTGCTATCGCCGCTGTTGGTGGTGCTGA
GGGCAATATCAAGGTCGTCGGTCTTCCCCGTTTGGCGCCGGCTGGCGGTG
CCGCTGCTTCCAAGGCGAAGGGCAAGGGCGCTGCTTCACAGGCGACTGCC
TCCGCTGCCGGCACTCTCCTCGCCTCTCTCCAGGCTCAGAGTGACGGTGT
TGAGACTCTCTCTTTCTCTTCCCCTCCTCTGACCCTTCTTGCGGCTGGCT
CCGTGGACGGCTCGATCGCCCTGTTCGACGCTGCCCATCGCTTCGCAGTC
CGTCGTCACATCAAGGAGGCGCACGAGGGCGCCGTGGTTAAGGTTGAGTT
CCTGCAGAGCCGTGCTCCTGCCACCCCCTTGCCTCGTCCCAGCCCGCTGG
CTGCCGCGACGGCCGGCCAAGGCCAACCGTGGCTGCTCACCTCCGTGGGT
ATGGATGGTATTGTCAGACGCTGGGATGCTCGTGGAGGAACTGCGGCTGC
TGCCCAGGGTTTGTTGAAAGAGTGGAAGGGCCACTTGGGTCTTGTTGAGA
ACTCGGAGGGTGAACAATCTGGCGGTATCATGGGCTTTGTCCAGAGCTCG
GATGGTAAGCGGGTTGTTACGGCCGGTGATGACGGTATTACTCTGGTATT
TGAGCAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000012.1:317215..318774+

>CAN33_8355-T1 ID=CAN33_8355-T1|Name=CAN33_8355-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1560bp|location=Sequence derived from alignment at NKJJ01000012.1:317215..318774+ (Aspergillus niger FDAARGOS_311)
ATGTCGTCGCAAGATCCTCACCGCGCCGACGACGACGCCTACATTGAAGC
CGATGAAGCTGATGAGGTTATCAACCGCGATGAGGACCACCCCATGGAGT
CCGATGCCGAGGACGAGGATGGAGACCAGCCTATGAGCTACGAAGAACAA
GAAATCACTCTGGAGAATGACTCTTCCGCCCATTTCGATAGCCACAACGA
CTCCGTTTTCTGCATTGCCCAGCACCCCATCCACAACAACATCGTAATCA
CTGGCTCCGGAGACGATACCGCTTACATCTTCGATTCGACGCCTAATGAT
GAGCGCCCCGTCCTTCCCCCCAGCTACGAATCGGACCCGCAACCCAGGCG
CGAGCGGGATTCTCTTAAGCCCATCCTTAAGCTTGAGGGCCACGCCGACA
CCGTGAACGCCGTCGCATTCACAGAACCCAAGGGCGAGTTTGTTGTCACA
GCAGGAATGGATGGTAAGCTGCGTGCTTACCGCGACACTACCCCCCAGGG
AACCGGCCTCGCATGGCAGTTCCTCGCGGAGGTTCAAGAAGTGGAGGAGA
TCAACTGGGTTGCTGTCTGCCCTTGCGAGAAGGGCGACGAGGAGAAGAGC
AACATCATTGCTCTGGGTGCCAACGACGGTAGCGCTTGGGTGTTCCGCAT
CGACCCCAGGGACGCCGCGGCTCCTATCTCCATCATTCAGTCGTTCTTCC
AACACACCGGTTCTTGCACGGCGGGTGCCTGGACCCCCGATGGAAAGCTG
CTGGCGACCGTCTCCGAGGACGGTAGCTTCTACGTCTACGATGTCTTTGG
TGCCGCTGCCGCTGCTGGCGTCTCCTACTCCCCGGGTACTAGCGCTGTTG
TCGGTCTGACTGCGGAGGACCAGCGCTTCGCCGTCGAGGGTGGTCTGTAC
TCGATCGCCATCTCCCCGGGTGGTGCTATCGCCGCTGTTGGTGGTGCTGA
GGGCAATATCAAGGTCGTCGGTCTTCCCCGTTTGGCGCCGGCTGGCGGTG
CCGCTGCTTCCAAGGCGAAGGGCAAGGGCGCTGCTTCACAGGCGACTGCC
TCCGCTGCCGGCACTCTCCTCGCCTCTCTCCAGGCTCAGAGTGACGGTGT
TGAGACTCTCTCTTTCTCTTCCCCTCCTCTGACCCTTCTTGCGGCTGGCT
CCGTGGACGGCTCGATCGCCCTGTTCGACGCTGCCCATCGCTTCGCAGTC
CGTCGTCACATCAAGGAGGCGCACGAGGGCGCCGTGGTTAAGGTTGAGTT
CCTGCAGAGCCGTGCTCCTGCCACCCCCTTGCCTCGTCCCAGCCCGCTGG
CTGCCGCGACGGCCGGCCAAGGCCAACCGTGGCTGCTCACCTCCGTGGGT
ATGGATGGTATTGTCAGACGCTGGGATGCTCGTGGAGGAACTGCGGCTGC
TGCCCAGGGTTTGTTGAAAGAGTGGAAGGGCCACTTGGGTCTTGTTGAGA
ACTCGGAGGGTGAACAATCTGGCGGTATCATGGGCTTTGTCCAGAGCTCG
GATGGTAAGCGGGTTGTTACGGCCGGTGATGACGGTATTACTCTGGTATT
TGAGCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_8355CAN33_8355Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8355-T1.exon1CAN33_8355-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8355-T1.cdsCAN33_8355-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8355-T1CAN33_8355-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:317215..318774 +
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