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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:396705..398046+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_8480-T1 ID=CAN33_8480-T1|Name=CAN33_8480-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1342bp|location=Sequence derived from alignment at NKJJ01000012.1:396705..398046+ (Aspergillus niger FDAARGOS_311)
ATGAAGGACGTCGGTTGTACATTGGGAACCTCGCTTATGCGACCACTGAG
GGGGAGCTGAAGGAGTTTTTCAAGAACTACAAGATGTAAGTTGCTTGACC
TTGCTTTGCTTTGTTGTTGTTCCACCTGGCCTTTCACCTCTCGGTTGGTC
TAAGCTCCGTTGGGCTGGTCCTAGCGGTTCGGGGGCCGGCGAGAGCCACG
TTTCCTACACCCCCTTGCTGCCATCGGAGGTAGTACCGCGCAGCGGTGGT
ATGTGGCCACCACTGCAGGGACGCCAATTGTTCAGAGCTCCATTTCTGAA
CCCCTTCTTTGTCAAACATTCTTATGCGGGAAGTTACACCGATCTAACAA
TGGCTCTTTCACAGTGAGAGCGTCTCCATCCCCGTGAACCCTCGCACCAA
CCGTCCCGTTGGCTACGCCTTCGTGGACCTCGCCACTGCTCAGGAGGCCA
CCGCTGCTATTGAGGAGCTGTCTGGAAAGGAGATCCTCCAGCGTAAGGTC
TCTGTGCAGCTTGCCCGCAAGCCCGAGCCTGCTGAGGCCAAGGCCGAGGG
TGCTACAAGTGGCGGTGAGGGTGCCAGCGGTAACGAGGGCCGCAAGAGGG
CTGGTGGCCGTGGCCGTGGCCGCGGCCGCGGTCGTGGTCGTGGAGGCCGT
CTGCCCCGTGCTGGTCGCTCTGTAAGTGGCTCGTCATTCATGCTCCATCC
AATCGGATACTAATCTACCATGTAGCAGGCCCCAGTTCAGAACGGTCAGG
AGGCTGCTGAGCCCACCAACGTTCCCGCTCAGGCTGCTCCCCTGACTGAG
GTCACCAACCAGAACGAGACGGCTGCTGCCACCGAGTCCAAGCAGGCTGG
CAAGCCCCGTGCTCCTCGTCCCCAGAAGCAGCGCGGTCCTCCCGAGGATG
GCATTCCTTCCAAGACCAAGGTCATGGTCGCTAACCTTCCTTATGACCTG
ACCGAAGACAAGGTACGGATGATGATTTCAGAATTTAGAGTAACATACTA
ATCCCCTCTCAGCTCAAGGAGATCTTTGCCGACTACCAGCCCGTCTCCGC
CAAGATTGCTCTCCGCCCCATTCCCCGTTTCATGATCAAGAAGCTCCAGG
CTCGCAACGAGCGCCGCAAGGGCCGTGGTTTCGGTTTCGTCACCCTTGGA
TCCGAGGAGCTCCAGAACAAGGCTGTTGTGGAGATGAACGGCAAGGAGAT
CGAGGGCCGTGAAATCGCCGTCAAGGTCGCCATCGACAGCCCCGGCAAGG
AGGACGACGCCATCGCCCCTGCTGAGACTGAGACCACCGAGCAGGCGACT
GAGGCTCCGGCACAGGAGAACGCTGCTCCCGCCGCTGCTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:396705..398046+ >CAN33_8480-T1 ID=CAN33_8480-T1|Name=CAN33_8480-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5040bp|location=Sequence derived from alignment at NKJJ01000012.1:396705..398046+ (Aspergillus niger FDAARGOS_311)
ATGAAGGACGAGTTTTTCAAGAACTACAAGATTGAGAGCGTCTCCATCCC
CGTGAACCCTCGCACCAACCGTCCCGTTGGCTACGCCTTCGTGGACCTCG
CCACTGCTCAGGAGGCCACCGCTGCTATTGAGGAGCTGTCTGGAAAGGAG
ATCCTCCAGCGTAAGGTCTCTGTGCAGCTTGCCCGCAAGCCCGAGCCTGC
TGAGGCCAAGGCCGAGGGTGCTACAAGTGGCGGTGAGGGTGCCAGCGGCC
GTCTGCCCCGTGCTGGTCGCTCTCAGGCCCCAGTTCAGAACGGTCAGGAG
GCTGCTGAGCCCACCAACGTTCCCGCTCAGGCTGCTCCCCTGACTGAGGT
CACCAACCAGAACGAGACGGCTGCTGCCACCGAGTCCAAGCAGGCTGGCA
AGCCCCGTGCTCCTCGTCCCCAGAAGCAGCGCGGTCCTCCCGAGGATGGC
ATTCCTTCCAAGACCAAGGTCATGGTCGCTAACCTTCCTTATGACCTGAC
CGAAGACAAGCTCAAGGAGATCTTTGCCGACTACCAGCCCGTCTCCGCCA
AGATTGCTCTCCGCCCCATTCCCCGTTTCATGATCAAGAAGCTCCAGGCT
CGCAACGAGCGCCGCAAGGGCCGTGGTTTCGGTTTCGTCACCCTTGGATC
CGAGGAGCTCCAGAACAAGGCTGTTGTGGAGATGAACGGCAAGGAGATCG
AGGGCCGTGAAATCGCCGTCAAGGTCGCCATCGACAGCCCCGGCAAGGAG
GACGACGCCATCGCCCCTGCTGAGACTGAGACCACCGAGCAGGCGACTGA
GGCTCCGGCACAGGAGAACGCTGCTCCCGCCGCTGCTTAAATGAAGGACG
AGTTTTTCAAGAACTACAAGATTGAGAGCGTCTCCATCCCCGTGAACCCT
CGCACCAACCGTCCCGTTGGCTACGCCTTCGTGGACCTCGCCACTGCTCA
GGAGGCCACCGCTGCTATTGAGGAGCTGTCTGGAAAGGAGATCCTCCAGC
GTAAGGTCTCTGTGCAGCTTGCCCGCAAGCCCGAGCCTGCTGAGGCCAAG
GCCGAGGGTGCTACAAGTGGCGGTGAGGGTGCCAGCGGCCGTCTGCCCCG
TGCTGGTCGCTCTCAGGCCCCAGTTCAGAACGGTCAGGAGGCTGCTGAGC
CCACCAACGTTCCCGCTCAGGCTGCTCCCCTGACTGAGGTCACCAACCAG
AACGAGACGGCTGCTGCCACCGAGTCCAAGCAGGCTGGCAAGCCCCGTGC
TCCTCGTCCCCAGAAGCAGCGCGGTCCTCCCGAGGATGGCATTCCTTCCA
AGACCAAGGTCATGGTCGCTAACCTTCCTTATGACCTGACCGAAGACAAG
CTCAAGGAGATCTTTGCCGACTACCAGCCCGTCTCCGCCAAGATTGCTCT
CCGCCCCATTCCCCGTTTCATGATCAAGAAGCTCCAGGCTCGCAACGAGC
GCCGCAAGGGCCGTGGTTTCGGTTTCGTCACCCTTGGATCCGAGGAGCTC
CAGAACAAGGCTGTTGTGGAGATGAACGGCAAGGAGATCGAGGGCCGTGA
AATCGCCGTCAAGGTCGCCATCGACAGCCCCGGCAAGGAGGACGACGCCA
TCGCCCCTGCTGAGACTGAGACCACCGAGCAGGCGACTGAGGCTCCGGCA
CAGGAGAACGCTGCTCCCGCCGCTGCTTAAATGAAGGACGAGTTTTTCAA
GAACTACAAGATTGAGAGCGTCTCCATCCCCGTGAACCCTCGCACCAACC
GTCCCGTTGGCTACGCCTTCGTGGACCTCGCCACTGCTCAGGAGGCCACC
GCTGCTATTGAGGAGCTGTCTGGAAAGGAGATCCTCCAGCGTAAGGTCTC
TGTGCAGCTTGCCCGCAAGCCCGAGCCTGCTGAGGCCAAGGCCGAGGGTG
CTACAAGTGGCGGTGAGGGTGCCAGCGGCCGTCTGCCCCGTGCTGGTCGC
TCTCAGGCCCCAGTTCAGAACGGTCAGGAGGCTGCTGAGCCCACCAACGT
TCCCGCTCAGGCTGCTCCCCTGACTGAGGTCACCAACCAGAACGAGACGG
CTGCTGCCACCGAGTCCAAGCAGGCTGGCAAGCCCCGTGCTCCTCGTCCC
CAGAAGCAGCGCGGTCCTCCCGAGGATGGCATTCCTTCCAAGACCAAGGT
CATGGTCGCTAACCTTCCTTATGACCTGACCGAAGACAAGCTCAAGGAGA
TCTTTGCCGACTACCAGCCCGTCTCCGCCAAGATTGCTCTCCGCCCCATT
CCCCGTTTCATGATCAAGAAGCTCCAGGCTCGCAACGAGCGCCGCAAGGG
CCGTGGTTTCGGTTTCGTCACCCTTGGATCCGAGGAGCTCCAGAACAAGG
CTGTTGTGGAGATGAACGGCAAGGAGATCGAGGGCCGTGAAATCGCCGTC
AAGGTCGCCATCGACAGCCCCGGCAAGGAGGACGACGCCATCGCCCCTGC
TGAGACTGAGACCACCGAGCAGGCGACTGAGGCTCCGGCACAGGAGAACG
CTGCTCCCGCCGCTGCTTAAATGAAGGACGAGTTTTTCAAGAACTACAAG
ATTGAGAGCGTCTCCATCCCCGTGAACCCTCGCACCAACCGTCCCGTTGG
CTACGCCTTCGTGGACCTCGCCACTGCTCAGGAGGCCACCGCTGCTATTG
AGGAGCTGTCTGGAAAGGAGATCCTCCAGCGTAAGGTCTCTGTGCAGCTT
GCCCGCAAGCCCGAGCCTGCTGAGGCCAAGGCCGAGGGTGCTACAAGTGG
CGGTGAGGGTGCCAGCGGCCGTCTGCCCCGTGCTGGTCGCTCTCAGGCCC
CAGTTCAGAACGGTCAGGAGGCTGCTGAGCCCACCAACGTTCCCGCTCAG
GCTGCTCCCCTGACTGAGGTCACCAACCAGAACGAGACGGCTGCTGCCAC
CGAGTCCAAGCAGGCTGGCAAGCCCCGTGCTCCTCGTCCCCAGAAGCAGC
GCGGTCCTCCCGAGGATGGCATTCCTTCCAAGACCAAGGTCATGGTCGCT
AACCTTCCTTATGACCTGACCGAAGACAAGCTCAAGGAGATCTTTGCCGA
CTACCAGCCCGTCTCCGCCAAGATTGCTCTCCGCCCCATTCCCCGTTTCA
TGATCAAGAAGCTCCAGGCTCGCAACGAGCGCCGCAAGGGCCGTGGTTTC
GGTTTCGTCACCCTTGGATCCGAGGAGCTCCAGAACAAGGCTGTTGTGGA
GATGAACGGCAAGGAGATCGAGGGCCGTGAAATCGCCGTCAAGGTCGCCA
TCGACAGCCCCGGCAAGGAGGACGACGCCATCGCCCCTGCTGAGACTGAG
ACCACCGAGCAGGCGACTGAGGCTCCGGCACAGGAGAACGCTGCTCCCGC
CGCTGCTTAAATGAAGGACGAGTTTTTCAAGAACTACAAGATTGAGAGCG
TCTCCATCCCCGTGAACCCTCGCACCAACCGTCCCGTTGGCTACGCCTTC
GTGGACCTCGCCACTGCTCAGGAGGCCACCGCTGCTATTGAGGAGCTGTC
TGGAAAGGAGATCCTCCAGCGTAAGGTCTCTGTGCAGCTTGCCCGCAAGC
CCGAGCCTGCTGAGGCCAAGGCCGAGGGTGCTACAAGTGGCGGTGAGGGT
GCCAGCGGCCGTCTGCCCCGTGCTGGTCGCTCTCAGGCCCCAGTTCAGAA
CGGTCAGGAGGCTGCTGAGCCCACCAACGTTCCCGCTCAGGCTGCTCCCC
TGACTGAGGTCACCAACCAGAACGAGACGGCTGCTGCCACCGAGTCCAAG
CAGGCTGGCAAGCCCCGTGCTCCTCGTCCCCAGAAGCAGCGCGGTCCTCC
CGAGGATGGCATTCCTTCCAAGACCAAGGTCATGGTCGCTAACCTTCCTT
ATGACCTGACCGAAGACAAGCTCAAGGAGATCTTTGCCGACTACCAGCCC
GTCTCCGCCAAGATTGCTCTCCGCCCCATTCCCCGTTTCATGATCAAGAA
GCTCCAGGCTCGCAACGAGCGCCGCAAGGGCCGTGGTTTCGGTTTCGTCA
CCCTTGGATCCGAGGAGCTCCAGAACAAGGCTGTTGTGGAGATGAACGGC
AAGGAGATCGAGGGCCGTGAAATCGCCGTCAAGGTCGCCATCGACAGCCC
CGGCAAGGAGGACGACGCCATCGCCCCTGCTGAGACTGAGACCACCGAGC
AGGCGACTGAGGCTCCGGCACAGGAGAACGCTGCTCCCGCCGCTGCTTAA
ATGAAGGACGAGTTTTTCAAGAACTACAAGATTGAGAGCGTCTCCATCCC
CGTGAACCCTCGCACCAACCGTCCCGTTGGCTACGCCTTCGTGGACCTCG
CCACTGCTCAGGAGGCCACCGCTGCTATTGAGGAGCTGTCTGGAAAGGAG
ATCCTCCAGCGTAAGGTCTCTGTGCAGCTTGCCCGCAAGCCCGAGCCTGC
TGAGGCCAAGGCCGAGGGTGCTACAAGTGGCGGTGAGGGTGCCAGCGGCC
GTCTGCCCCGTGCTGGTCGCTCTCAGGCCCCAGTTCAGAACGGTCAGGAG
GCTGCTGAGCCCACCAACGTTCCCGCTCAGGCTGCTCCCCTGACTGAGGT
CACCAACCAGAACGAGACGGCTGCTGCCACCGAGTCCAAGCAGGCTGGCA
AGCCCCGTGCTCCTCGTCCCCAGAAGCAGCGCGGTCCTCCCGAGGATGGC
ATTCCTTCCAAGACCAAGGTCATGGTCGCTAACCTTCCTTATGACCTGAC
CGAAGACAAGCTCAAGGAGATCTTTGCCGACTACCAGCCCGTCTCCGCCA
AGATTGCTCTCCGCCCCATTCCCCGTTTCATGATCAAGAAGCTCCAGGCT
CGCAACGAGCGCCGCAAGGGCCGTGGTTTCGGTTTCGTCACCCTTGGATC
CGAGGAGCTCCAGAACAAGGCTGTTGTGGAGATGAACGGCAAGGAGATCG
AGGGCCGTGAAATCGCCGTCAAGGTCGCCATCGACAGCCCCGGCAAGGAG
GACGACGCCATCGCCCCTGCTGAGACTGAGACCACCGAGCAGGCGACTGA
GGCTCCGGCACAGGAGAACGCTGCTCCCGCCGCTGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | RNA recognition motif family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:396705..398046 + |
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