|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:404312..405827+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_8495-T1 ID=CAN33_8495-T1|Name=CAN33_8495-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1516bp|location=Sequence derived from alignment at NKJJ01000012.1:404312..405827+ (Aspergillus niger FDAARGOS_311)
ATGTCGCGAATGTGGGAGGTTGATCCGGAGACAAGGGCCAAGGTATGCCA
TCATCACCCCTCCATCCCCTGTTTCTGCCACAACCTCCGCGTCGACGTCG
GAGGCCTTGGACAACACACGCTGACTTCCCCGGATCTGCTCTCCCCCTCT
AGCTCCTCCAGTTCTCCAAAACCAATGGCAACGATAAATGCTGCGACTGC
GGCGCCCCTTCGCCTCAATGGGTATGACAGTCCTTTATTCCTAGACATGC
GCAGCACTGTCGCCACGATTCCGCACAACCGTACCGACCGACAATACGCC
CTCCTTATAACCTCCACTAACACGAATTCTACATCCAGGCGTCCCCTAAA
TTCGGTACCTTCATCTGCCTGAACTGTGCCGGCACCCACCGCGGCCTGGG
CGTTCACATCTCCTTCGTCCGTTCCATCACCATGGACGCCTTCAAGACTT
CAGAGATTCTCCGCATGGAGCACGGTGGCAACGAGCCGTGGAAGGCATTC
TTCGATTCCCACCCCATCACGCAATCCGAAGGTCGCACGTTCGAAGATTC
CACCATAAAAGAAAGATACGAAGGCGAAGTCGGCGAGGAGTGGAAAGAGA
GACTCGCTGCGAAGGCCGAAGGAAGAGAATACGTTCCGGGTCAACCCAAA
CCGCAACAACCAAAGAATAAGGAACCGACATCCCGGTCAAGCACACCCCT
GGCTGCCCGGGGCGGATCCCCGGCATCGCACGACGGTGTGCCAGAGATGA
GCAAGAAGGAACGCAACGAGGCGTATTTTGCTCGGCTGGGAAACGAAAAC
TCCTCGCGCTCGGAATCGGTACCTCCATCACAAGGAGGCAAGTTCACCGG
ATTCGGGGGTGGAATGCCGGTCACGAACACACCCAAATCGTCAGGTAGCG
GGGCGGCAATTCCAGGATTCGATGATTTCCAGAAGGATCCTATGGGTGCG
TTGACAAAGGGCTTCGGATGGTTTGCGACGACTGTGGGGAAGAGTGCGAA
GACAGTCAATGATTCGTACATCCAGCCTACGGCGAAGACGGTACATTTTC
CATCCATCCTCATCTCTGTTCGCTATGTACCAGTAAGATACTGATGACCT
CTTTCACCATCTAGATAGCAGAATCCGACCTTGCAGCTCAAGCGCGCATT
CACGCCGCCACCCTCGGCCAAAACATGCAACACGGCGTCCGTGGCGCAGC
GGACCAATTCCATCGTTTCGTGGAAGGCCCCGACGAAGCTGCAGCCGCAG
CTGCAGCACGGAGAGGCCGCGTTGAACCGGAAAGAAAGGACTTCTGGGAC
TCGTTCTCCTCCGTCGCGGCGCAGGATAGCCACCGGAGAACCGCATCCAG
GTCGAGTGCTATTGGCACCGCGGCGATGAAGACGGGGCCTAGTGGTGCTG
GCACTTCTTCGACTTCGTCTGCTGCTGCGTCGTCTGCAACGACGGGCACG
GGGGCGGGCTCGTCCGCGACGGCGAGGAAGAGTACGGATGACGGTGGATG
GGACGATAACTGGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:404312..405827+ >CAN33_8495-T1 ID=CAN33_8495-T1|Name=CAN33_8495-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4860bp|location=Sequence derived from alignment at NKJJ01000012.1:404312..405827+ (Aspergillus niger FDAARGOS_311)
ATGTCGCGAATGTGGGAGGTTGATCCGGAGACAAGGGCCAAGCTCCTCCA
GTTCTCCAAAACCAATGGCAACGATAAATGCTGCGACTGCGGCGCCCCTT
CGCCTCAATGGGCGTCCCCTAAATTCGGTACCTTCATCTGCCTGAACTGT
GCCGGCACCCACCGCGGCCTGGGCGTTCACATCTCCTTCGTCCGTTCCAT
CACCATGGACGCCTTCAAGACTTCAGAGATTCTCCGCATGGAGCACGGTG
GCAACGAGCCGTGGAAGGCATTCTTCGATTCCCACCCCATCACGCAATCC
GAAGGTCGCACGTTCGAAGATTCCACCATAAAAGAAAGATACGAAGGCGA
AGTCGGCGAGGAGTGGAAAGAGAGACTCGCTGCGAAGGCCGAAGGAAGAG
AATACGTTCCGGGTCAACCCAAACCGCAACAACCAAAGAATAAGGAACCG
ACATCCCGGTCAAGCACACCCCTGGCTGCCCGGGGCGGATCCCCGGCATC
GCACGACGGTGTGCCAGAGATGAGCAAGAAGGAACGCAACGAGGCGTATT
TTGCTCGGCTGGGAAACGAAAACTCCTCGCGCTCGGAATCGGTACCTCCA
TCACAAGGAGGCAAGTTCACCGGATTCGGGGGTGGAATGCCGGTCACGAA
CACACCCAAATCGTCAGGTAGCGGGGCGGCAATTCCAGGATTCGATGATT
TCCAGAAGGATCCTATGGGTGCGTTGACAAAGGGCTTCGGATGGTTTGCG
ACGACTGTGGGGAAGAGTGCGAAGACAGTCAATGATTCGTACATCCAGCC
TACGGCGAAGACGATAGCAGAATCCGACCTTGCAGCTCAAGCGCGCATTC
ACGCCGCCACCCTCGGCCAAAACATGCAACACGGCGTCCGTGGCGCAGCG
GACCAATTCCATCGTTTCGTGGAAGGCCCCGACGAAGCTGCAGCCGCAGC
TGCAGCACGGAGAGGCCGCGTTGAACCGGAAAGAAAGGACTTCTGGGACT
CGTTCTCCTCCGTCGCGGCGCAGGATAGCCACCGGAGAACCGCATCCAGG
TCGAGTGCTATTGGCACCGCGGCGATGAAGACGGGGCCTAGTGGTGCTGG
CACTTCTTCGACTTCGTCTGCTGCTGCGTCGTCTGCAACGACGGGCACGG
GGGCGGGCTCGTCCGCGACGGCGAGGAAGAGTACGGATGACGGTGGATGG
GACGATAACTGGTGAATGTCGCGAATGTGGGAGGTTGATCCGGAGACAAG
GGCCAAGCTCCTCCAGTTCTCCAAAACCAATGGCAACGATAAATGCTGCG
ACTGCGGCGCCCCTTCGCCTCAATGGGCGTCCCCTAAATTCGGTACCTTC
ATCTGCCTGAACTGTGCCGGCACCCACCGCGGCCTGGGCGTTCACATCTC
CTTCGTCCGTTCCATCACCATGGACGCCTTCAAGACTTCAGAGATTCTCC
GCATGGAGCACGGTGGCAACGAGCCGTGGAAGGCATTCTTCGATTCCCAC
CCCATCACGCAATCCGAAGGTCGCACGTTCGAAGATTCCACCATAAAAGA
AAGATACGAAGGCGAAGTCGGCGAGGAGTGGAAAGAGAGACTCGCTGCGA
AGGCCGAAGGAAGAGAATACGTTCCGGGTCAACCCAAACCGCAACAACCA
AAGAATAAGGAACCGACATCCCGGTCAAGCACACCCCTGGCTGCCCGGGG
CGGATCCCCGGCATCGCACGACGGTGTGCCAGAGATGAGCAAGAAGGAAC
GCAACGAGGCGTATTTTGCTCGGCTGGGAAACGAAAACTCCTCGCGCTCG
GAATCGGTACCTCCATCACAAGGAGGCAAGTTCACCGGATTCGGGGGTGG
AATGCCGGTCACGAACACACCCAAATCGTCAGGTAGCGGGGCGGCAATTC
CAGGATTCGATGATTTCCAGAAGGATCCTATGGGTGCGTTGACAAAGGGC
TTCGGATGGTTTGCGACGACTGTGGGGAAGAGTGCGAAGACAGTCAATGA
TTCGTACATCCAGCCTACGGCGAAGACGATAGCAGAATCCGACCTTGCAG
CTCAAGCGCGCATTCACGCCGCCACCCTCGGCCAAAACATGCAACACGGC
GTCCGTGGCGCAGCGGACCAATTCCATCGTTTCGTGGAAGGCCCCGACGA
AGCTGCAGCCGCAGCTGCAGCACGGAGAGGCCGCGTTGAACCGGAAAGAA
AGGACTTCTGGGACTCGTTCTCCTCCGTCGCGGCGCAGGATAGCCACCGG
AGAACCGCATCCAGGTCGAGTGCTATTGGCACCGCGGCGATGAAGACGGG
GCCTAGTGGTGCTGGCACTTCTTCGACTTCGTCTGCTGCTGCGTCGTCTG
CAACGACGGGCACGGGGGCGGGCTCGTCCGCGACGGCGAGGAAGAGTACG
GATGACGGTGGATGGGACGATAACTGGTGAATGTCGCGAATGTGGGAGGT
TGATCCGGAGACAAGGGCCAAGCTCCTCCAGTTCTCCAAAACCAATGGCA
ACGATAAATGCTGCGACTGCGGCGCCCCTTCGCCTCAATGGGCGTCCCCT
AAATTCGGTACCTTCATCTGCCTGAACTGTGCCGGCACCCACCGCGGCCT
GGGCGTTCACATCTCCTTCGTCCGTTCCATCACCATGGACGCCTTCAAGA
CTTCAGAGATTCTCCGCATGGAGCACGGTGGCAACGAGCCGTGGAAGGCA
TTCTTCGATTCCCACCCCATCACGCAATCCGAAGGTCGCACGTTCGAAGA
TTCCACCATAAAAGAAAGATACGAAGGCGAAGTCGGCGAGGAGTGGAAAG
AGAGACTCGCTGCGAAGGCCGAAGGAAGAGAATACGTTCCGGGTCAACCC
AAACCGCAACAACCAAAGAATAAGGAACCGACATCCCGGTCAAGCACACC
CCTGGCTGCCCGGGGCGGATCCCCGGCATCGCACGACGGTGTGCCAGAGA
TGAGCAAGAAGGAACGCAACGAGGCGTATTTTGCTCGGCTGGGAAACGAA
AACTCCTCGCGCTCGGAATCGGTACCTCCATCACAAGGAGGCAAGTTCAC
CGGATTCGGGGGTGGAATGCCGGTCACGAACACACCCAAATCGTCAGGTA
GCGGGGCGGCAATTCCAGGATTCGATGATTTCCAGAAGGATCCTATGGGT
GCGTTGACAAAGGGCTTCGGATGGTTTGCGACGACTGTGGGGAAGAGTGC
GAAGACAGTCAATGATTCGTACATCCAGCCTACGGCGAAGACGATAGCAG
AATCCGACCTTGCAGCTCAAGCGCGCATTCACGCCGCCACCCTCGGCCAA
AACATGCAACACGGCGTCCGTGGCGCAGCGGACCAATTCCATCGTTTCGT
GGAAGGCCCCGACGAAGCTGCAGCCGCAGCTGCAGCACGGAGAGGCCGCG
TTGAACCGGAAAGAAAGGACTTCTGGGACTCGTTCTCCTCCGTCGCGGCG
CAGGATAGCCACCGGAGAACCGCATCCAGGTCGAGTGCTATTGGCACCGC
GGCGATGAAGACGGGGCCTAGTGGTGCTGGCACTTCTTCGACTTCGTCTG
CTGCTGCGTCGTCTGCAACGACGGGCACGGGGGCGGGCTCGTCCGCGACG
GCGAGGAAGAGTACGGATGACGGTGGATGGGACGATAACTGGTGAATGTC
GCGAATGTGGGAGGTTGATCCGGAGACAAGGGCCAAGCTCCTCCAGTTCT
CCAAAACCAATGGCAACGATAAATGCTGCGACTGCGGCGCCCCTTCGCCT
CAATGGGCGTCCCCTAAATTCGGTACCTTCATCTGCCTGAACTGTGCCGG
CACCCACCGCGGCCTGGGCGTTCACATCTCCTTCGTCCGTTCCATCACCA
TGGACGCCTTCAAGACTTCAGAGATTCTCCGCATGGAGCACGGTGGCAAC
GAGCCGTGGAAGGCATTCTTCGATTCCCACCCCATCACGCAATCCGAAGG
TCGCACGTTCGAAGATTCCACCATAAAAGAAAGATACGAAGGCGAAGTCG
GCGAGGAGTGGAAAGAGAGACTCGCTGCGAAGGCCGAAGGAAGAGAATAC
GTTCCGGGTCAACCCAAACCGCAACAACCAAAGAATAAGGAACCGACATC
CCGGTCAAGCACACCCCTGGCTGCCCGGGGCGGATCCCCGGCATCGCACG
ACGGTGTGCCAGAGATGAGCAAGAAGGAACGCAACGAGGCGTATTTTGCT
CGGCTGGGAAACGAAAACTCCTCGCGCTCGGAATCGGTACCTCCATCACA
AGGAGGCAAGTTCACCGGATTCGGGGGTGGAATGCCGGTCACGAACACAC
CCAAATCGTCAGGTAGCGGGGCGGCAATTCCAGGATTCGATGATTTCCAG
AAGGATCCTATGGGTGCGTTGACAAAGGGCTTCGGATGGTTTGCGACGAC
TGTGGGGAAGAGTGCGAAGACAGTCAATGATTCGTACATCCAGCCTACGG
CGAAGACGATAGCAGAATCCGACCTTGCAGCTCAAGCGCGCATTCACGCC
GCCACCCTCGGCCAAAACATGCAACACGGCGTCCGTGGCGCAGCGGACCA
ATTCCATCGTTTCGTGGAAGGCCCCGACGAAGCTGCAGCCGCAGCTGCAG
CACGGAGAGGCCGCGTTGAACCGGAAAGAAAGGACTTCTGGGACTCGTTC
TCCTCCGTCGCGGCGCAGGATAGCCACCGGAGAACCGCATCCAGGTCGAG
TGCTATTGGCACCGCGGCGATGAAGACGGGGCCTAGTGGTGCTGGCACTT
CTTCGACTTCGTCTGCTGCTGCGTCGTCTGCAACGACGGGCACGGGGGCG
GGCTCGTCCGCGACGGCGAGGAAGAGTACGGATGACGGTGGATGGGACGA
TAACTGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005096 | GTPase activator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037278 |
| DBxref | InterPro:IPR038508 |
| DBxref | InterPro:IPR001164 |
| DBxref | PFAM:PF01412 |
| Product | putative GTPase activating protein for Arf family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:404312..405827 + |
|
