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CAN33_8550-T1, CAN33_8550-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_8550-T1
Unique NameCAN33_8550-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:446257..448133-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_8550-T1 ID=CAN33_8550-T1|Name=CAN33_8550-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1877bp|location=Sequence derived from alignment at NKJJ01000012.1:446257..448133- (Aspergillus niger FDAARGOS_311)
ATGGACTATTCCGCCATATCAAACGATCCTGATCATCCTGCGGGCACTTC
TCCATGGGCTTCACCTCGCCCGACCCAAACAACCTTTCCGGCTTCCGTGA
CTAGCGACATCCCCCCTGCCCCCTTGCCTCCCCAAGATCCCTACAATGCC
GAATCGCAGCCTACCGAAACTCCTGGGTTCCAGGAGAACGAGATTGGATC
GCCCGACTTGTCTGCGCGACTGCAGGGTGCACAACTGGGTGAGCCGGGCT
ATGTTGATGAGCACTCGCAACACACTCAGCAGCAGCATGGACAACAGCCT
CGCTCTCAGCTCCCCGCCCGCTACCAAACGGGCCCAAGACAGAATCCCAG
ACAACCCGCACCTGTGTATAGAATCCAGGCGAAAGTCACGGGGCTAGAGA
GAACGGGCAAGAAGGACCCTATTCTTCGATTTGATGTTCACGTGAGCGAT
ATCCTTTTCTTGCCTCGCCCTGCGCCTACTGATTACAGGCTCCAGACGAA
TATCCCCAAGTTTAGGACAACACAGTATCGAGACGTTCGTCGTACCCATG
CCGAGTTTGTCAAGCTTGCGGACCATCTGATTTCGGCTAACCCGGAAGCG
TTGGTTCCTGCGGTCCCCCCACCACTTACCCCTGCCGGCGCTGGAACCGA
AGAGGATGAAATCAGAGTCAAGTCGTCTTTGCAACGGTGGTTGAATGTTG
TATTGAGCAATGAAGTTCTCATCCATGACGATGAGGTGGTCCTGTTCGTT
GAGAGTGATTTCGGTTACAGTCCTGTAGTTCGGATGAAACAACCTGCGAC
TGGGGTTCGAAGGAAGGTCTTGAAGCAGTTCGCGCCACCCCCCGATGACA
CACCCGAATTACAAAATGCGCGTCCGATTGTAAAGATGTTCTATCTTGGA
ACAATGGATACTAGTCACAAGGTTGACCGTGTCGTCAAAGCCCGTCGAGG
TATGCGCCAGGGATTCGTATCTCATGATCATGGGAACTAACATTGGGCTA
TCCAGGACTCGGTCTCGCAGAATCCGACTTTGGTGTTAAGTTAGGCCAGA
TGCACGTGCAAGAGACGCACCCTGGACTGTCAAATGCATACCGGAAATTG
GGAAAGATCATCCAAACGGTCGGGGATTTCCATGCCGTCCAGGCGACTGC
GGAGGCCACAACACTGGGGGATCCGCTAAGCTACCACTCGTCCGATGCCT
TTATTGTCAAGGAGACTCTTACAAATCGCCACATCCTCCTTCGTGATTTG
ATCCAAGCTCAACAGGCAACAAGGAGCAAACGCGCCGCCGCTGATCGCCT
CAAAGTCAGTTCCTCCGTCCGCCCGGACAAGGTGGACGAGGCCATCAATG
CCCTGGATGAGGCTCAGGGCCACGAGGACTACCTGACGAAGCGAACACAG
CGGGTTACGTCGAACTTACTCGCCGAGAAGCAACGTTGGTTTGACCGGAC
GACTAACGACATGCTGGCCAGCCTCCGCGAGTATACGCTGCGCCAGATTG
AATCCGAACGGAGGACCCTCGCTACCTTGGAGAGTGTGCGACCTGATATT
CGAGCCATTGACGCTTCGGGAGGACTCAGCCGTCTAGGACGTGAATCCCA
CCCAACCGCTCGCCGACCTAACCTTGGTTCAAGTCAAGGCCCCAAGGGGG
ATGCTTGGAGCGGCATACCGCGTCGCAGCGACAGCCTTGGCCGGAGTCTC
AGTGGCAGTTTCGTTGCACCCACCCCAACTGAAGACGACGAAGAAGTCAA
CGGACACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCAGTGGTGTGAGCT
CGATTGTGGAGGAAGACGACGATGATCGCCTTGACGCTCGTAACGCGGCT
AGTCGCCTGGCCACGAGCACTTTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000012.1:446257..448133-

>CAN33_8550-T1 ID=CAN33_8550-T1|Name=CAN33_8550-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5301bp|location=Sequence derived from alignment at NKJJ01000012.1:446257..448133- (Aspergillus niger FDAARGOS_311)
GACTCGGTCTCGCAGAATCCGACTTTGGTGTTAAGTTAGGCCAGATGCAC
GTGCAAGAGACGCACCCTGGACTGTCAAATGCATACCGGAAATTGGGAAA
GATCATCCAAACGGTCGGGGATTTCCATGCCGTCCAGGCGACTGCGGAGG
CCACAACACTGGGGGATCCGCTAAGCTACCACTCGTCCGATGCCTTTATT
GTCAAGGAGACTCTTACAAATCGCCACATCCTCCTTCGTGATTTGATCCA
AGCTCAACAGGCAACAAGGAGCAAACGCGCCGCCGCTGATCGCCTCAAAG
TCAGTTCCTCCGTCCGCCCGGACAAGGTGGACGAGGCCATCAATGCCCTG
GATGAGGCTCAGGGCCACGAGGACTACCTGACGAAGCGAACACAGCGGGT
TACGTCGAACTTACTCGCCGAGAAGCAACGTTGGTTTGACCGGACGACTA
ACGACATGCTGGCCAGCCTCCGCGAGTATACGCTGCGCCAGATTGAATCC
GAACGGAGGACCCTCGCTACCTTGGAGAGTGTGCGACCTGATATTCGAGC
CATTGACGCTTCGGGAGGACTCAGCCGTCTAGGACGTGAATCCCACCCAA
CCGCTCGCCGACCTAACCTTGGTTCAAGTCAAGGCCCCAAGGGGGATGCT
TGGAGCGGCATACCGCGTCGCAGCGACAGCCTTGGCCGGAGTCTCAGTGG
CAGTTTCGTTGCACCCACCCCAACTGAAGACGACGAAGAAGTCAACGGAC
ACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCAGTGGTGTGAGCTCGATT
GTGGAGGAAGACGACGATGATCGCCTTGACGCTCGTAACGCGGCTAGTCG
CCTGGCCACGAGCACTTTCTAAACGAATATCCCCAAGTTTAGGACAACAC
AGTATCGAGACGTTCGTCGTACCCATGCCGAGTTTGTCAAGCTTGCGGAC
CATCTGATTTCGGCTAACCCGGAAGCGTTGGTTCCTGCGGTCCCCCCACC
ACTTACCCCTGCCGGCGCTGGAACCGAAGAGGATGAAATCAGAGTCAAGT
CGTCTTTGCAACGGTGGTTGAATGTTGTATTGAGCAATGAAGTTCTCATC
CATGACGATGAGGTGGTCCTGTTCGTTGAGAGTGATTTCGGTTACAGTCC
TGTAGTTCGGATGAAACAACCTGCGACTGGGGTTCGAAGGAAGGTCTTGA
AGCAGTTCGCGCCACCCCCCGATGACACACCCGAATTACAAAATGCGCGT
CCGATTGTAAAGATGTTCTATCTTGGAACAATGGATACTAGTCACAAGGT
TGACCGTGTCGTCAAAGCCCGTCGAGATGGACTATTCCGCCATATCAAAC
GATCCTGATCATCCTGCGGGCACTTCTCCATGGGCTTCACCTCGCCCGAC
CCAAACAACCTTTCCGGCTTCCGTGACTAGCGACATCCCCCCTGCCCCCT
TGCCTCCCCAAGATCCCTACAATGCCGAATCGCAGCCTACCGAAACTCCT
GGGTTCCAGGAGAACGAGATTGGATCGCCCGACTTGTCTGCGCGACTGCA
GGGTGCACAACTGGGTGAGCCGGGCTATGTTGATGAGCACTCGCAACACA
CTCAGCAGCAGCATGGACAACAGCCTCGCTCTCAGCTCCCCGCCCGCTAC
CAAACGGGCCCAAGACAGAATCCCAGACAACCCGCACCTGTGTATAGAAT
CCAGGCGAAAGTCACGGGGCTAGAGAGAACGGGCAAGAAGGACCCTATTC
TTCGATTTGATGTTCACGACTCGGTCTCGCAGAATCCGACTTTGGTGTTA
AGTTAGGCCAGATGCACGTGCAAGAGACGCACCCTGGACTGTCAAATGCA
TACCGGAAATTGGGAAAGATCATCCAAACGGTCGGGGATTTCCATGCCGT
CCAGGCGACTGCGGAGGCCACAACACTGGGGGATCCGCTAAGCTACCACT
CGTCCGATGCCTTTATTGTCAAGGAGACTCTTACAAATCGCCACATCCTC
CTTCGTGATTTGATCCAAGCTCAACAGGCAACAAGGAGCAAACGCGCCGC
CGCTGATCGCCTCAAAGTCAGTTCCTCCGTCCGCCCGGACAAGGTGGACG
AGGCCATCAATGCCCTGGATGAGGCTCAGGGCCACGAGGACTACCTGACG
AAGCGAACACAGCGGGTTACGTCGAACTTACTCGCCGAGAAGCAACGTTG
GTTTGACCGGACGACTAACGACATGCTGGCCAGCCTCCGCGAGTATACGC
TGCGCCAGATTGAATCCGAACGGAGGACCCTCGCTACCTTGGAGAGTGTG
CGACCTGATATTCGAGCCATTGACGCTTCGGGAGGACTCAGCCGTCTAGG
ACGTGAATCCCACCCAACCGCTCGCCGACCTAACCTTGGTTCAAGTCAAG
GCCCCAAGGGGGATGCTTGGAGCGGCATACCGCGTCGCAGCGACAGCCTT
GGCCGGAGTCTCAGTGGCAGTTTCGTTGCACCCACCCCAACTGAAGACGA
CGAAGAAGTCAACGGACACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCA
GTGGTGTGAGCTCGATTGTGGAGGAAGACGACGATGATCGCCTTGACGCT
CGTAACGCGGCTAGTCGCCTGGCCACGAGCACTTTCTAAACGAATATCCC
CAAGTTTAGGACAACACAGTATCGAGACGTTCGTCGTACCCATGCCGAGT
TTGTCAAGCTTGCGGACCATCTGATTTCGGCTAACCCGGAAGCGTTGGTT
CCTGCGGTCCCCCCACCACTTACCCCTGCCGGCGCTGGAACCGAAGAGGA
TGAAATCAGAGTCAAGTCGTCTTTGCAACGGTGGTTGAATGTTGTATTGA
GCAATGAAGTTCTCATCCATGACGATGAGGTGGTCCTGTTCGTTGAGAGT
GATTTCGGTTACAGTCCTGTAGTTCGGATGAAACAACCTGCGACTGGGGT
TCGAAGGAAGGTCTTGAAGCAGTTCGCGCCACCCCCCGATGACACACCCG
AATTACAAAATGCGCGTCCGATTGTAAAGATGTTCTATCTTGGAACAATG
GATACTAGTCACAAGGTTGACCGTGTCGTCAAAGCCCGTCGAGATGGACT
ATTCCGCCATATCAAACGATCCTGATCATCCTGCGGGCACTTCTCCATGG
GCTTCACCTCGCCCGACCCAAACAACCTTTCCGGCTTCCGTGACTAGCGA
CATCCCCCCTGCCCCCTTGCCTCCCCAAGATCCCTACAATGCCGAATCGC
AGCCTACCGAAACTCCTGGGTTCCAGGAGAACGAGATTGGATCGCCCGAC
TTGTCTGCGCGACTGCAGGGTGCACAACTGGGTGAGCCGGGCTATGTTGA
TGAGCACTCGCAACACACTCAGCAGCAGCATGGACAACAGCCTCGCTCTC
AGCTCCCCGCCCGCTACCAAACGGGCCCAAGACAGAATCCCAGACAACCC
GCACCTGTGTATAGAATCCAGGCGAAAGTCACGGGGCTAGAGAGAACGGG
CAAGAAGGACCCTATTCTTCGATTTGATGTTCACGACTCGGTCTCGCAGA
ATCCGACTTTGGTGTTAAGTTAGGCCAGATGCACGTGCAAGAGACGCACC
CTGGACTGTCAAATGCATACCGGAAATTGGGAAAGATCATCCAAACGGTC
GGGGATTTCCATGCCGTCCAGGCGACTGCGGAGGCCACAACACTGGGGGA
TCCGCTAAGCTACCACTCGTCCGATGCCTTTATTGTCAAGGAGACTCTTA
CAAATCGCCACATCCTCCTTCGTGATTTGATCCAAGCTCAACAGGCAACA
AGGAGCAAACGCGCCGCCGCTGATCGCCTCAAAGTCAGTTCCTCCGTCCG
CCCGGACAAGGTGGACGAGGCCATCAATGCCCTGGATGAGGCTCAGGGCC
ACGAGGACTACCTGACGAAGCGAACACAGCGGGTTACGTCGAACTTACTC
GCCGAGAAGCAACGTTGGTTTGACCGGACGACTAACGACATGCTGGCCAG
CCTCCGCGAGTATACGCTGCGCCAGATTGAATCCGAACGGAGGACCCTCG
CTACCTTGGAGAGTGTGCGACCTGATATTCGAGCCATTGACGCTTCGGGA
GGACTCAGCCGTCTAGGACGTGAATCCCACCCAACCGCTCGCCGACCTAA
CCTTGGTTCAAGTCAAGGCCCCAAGGGGGATGCTTGGAGCGGCATACCGC
GTCGCAGCGACAGCCTTGGCCGGAGTCTCAGTGGCAGTTTCGTTGCACCC
ACCCCAACTGAAGACGACGAAGAAGTCAACGGACACGGCACCGGTAAAGG
GCGCCTGCGCTCTGCCAGTGGTGTGAGCTCGATTGTGGAGGAAGACGACG
ATGATCGCCTTGACGCTCGTAACGCGGCTAGTCGCCTGGCCACGAGCACT
TTCTAAACGAATATCCCCAAGTTTAGGACAACACAGTATCGAGACGTTCG
TCGTACCCATGCCGAGTTTGTCAAGCTTGCGGACCATCTGATTTCGGCTA
ACCCGGAAGCGTTGGTTCCTGCGGTCCCCCCACCACTTACCCCTGCCGGC
GCTGGAACCGAAGAGGATGAAATCAGAGTCAAGTCGTCTTTGCAACGGTG
GTTGAATGTTGTATTGAGCAATGAAGTTCTCATCCATGACGATGAGGTGG
TCCTGTTCGTTGAGAGTGATTTCGGTTACAGTCCTGTAGTTCGGATGAAA
CAACCTGCGACTGGGGTTCGAAGGAAGGTCTTGAAGCAGTTCGCGCCACC
CCCCGATGACACACCCGAATTACAAAATGCGCGTCCGATTGTAAAGATGT
TCTATCTTGGAACAATGGATACTAGTCACAAGGTTGACCGTGTCGTCAAA
GCCCGTCGAGATGGACTATTCCGCCATATCAAACGATCCTGATCATCCTG
CGGGCACTTCTCCATGGGCTTCACCTCGCCCGACCCAAACAACCTTTCCG
GCTTCCGTGACTAGCGACATCCCCCCTGCCCCCTTGCCTCCCCAAGATCC
CTACAATGCCGAATCGCAGCCTACCGAAACTCCTGGGTTCCAGGAGAACG
AGATTGGATCGCCCGACTTGTCTGCGCGACTGCAGGGTGCACAACTGGGT
GAGCCGGGCTATGTTGATGAGCACTCGCAACACACTCAGCAGCAGCATGG
ACAACAGCCTCGCTCTCAGCTCCCCGCCCGCTACCAAACGGGCCCAAGAC
AGAATCCCAGACAACCCGCACCTGTGTATAGAATCCAGGCGAAAGTCACG
GGGCTAGAGAGAACGGGCAAGAAGGACCCTATTCTTCGATTTGATGTTCA
C
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030904retromer complex
Vocabulary: Biological Process
TermDefinition
GO:0042147retrograde transport, endosome to Golgi
GO:0015031protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_8550CAN33_8550Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8550-T1CAN33_8550-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8550-T1.cdsCAN33_8550-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8550-T1.exon3CAN33_8550-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_8550-T1.exon2CAN33_8550-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_8550-T1.exon1CAN33_8550-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09261IEH
DBxrefInterPro:IPR037907
DBxrefInterPro:IPR036871
DBxrefInterPro:IPR014461
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR015404
DBxrefInterPro:IPR001683
DBxrefPFAM:PF09325
DBxrefPFAM:PF00787
ProductVps5 C terminal like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:446257..448133 -
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