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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:505378..507135+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_8655-T1 ID=CAN33_8655-T1|Name=CAN33_8655-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1758bp|location=Sequence derived from alignment at NKJJ01000012.1:505378..507135+ (Aspergillus niger FDAARGOS_311)
ATGAAAACAAGAATAACCTACCTCCAACCCCCCTCCTCGCCATTCACCTC
CACCCAAGCGACCCTCACCCCGTCATCACTCAAGATCAGCGATCTAGATG
CTGCAAAAGAAGTCCGCGTTACGGTTGATCTGAGTGAGGTGGATGATGAT
GAGGTATATTGCCCTCTCTCTTTTTTTTTTTTTTTTTTTTACTCCCTCGG
TGTGATGTAATTTAGCTAATGCATGTGGAATCTCATCTATCTAGGTCCGG
AGTATCTTGACCAATCTGCACGAAGTACATATCCGCTGGGCGAGGGAACA
ACCATATGGGATTGTTTCGCCGTTCGGGAGTAGGGTTTCGGCGGGGTTGG
GGTGGGTGTGAGTCCTCTTCAGGGTGGGGATGATGGGGATGGGGAAGGCG
TATGTCGTCTTCTACGGAGGATGTTTGGGACGGGGATTGAGTGTGCTAAT
TATATGGTACGTTTTACATTTTCAGTTCTGGTGAGGTATGTACATGGGAT
GCTTATTCGGGATATTTATACATGTAGGACTCATTCACCAGCCCTCCCGT
TGTCTCTACGCGTTTCGCGTCCACGTCCACGTATCAATTCCACTCTTCCC
TGCCGGAACATAATCTTGGGGAGTATATAGTGAAGAATATCTGTCGCGAG
GAGGGTGCTGCGTGCGCTGCGGAATGGGGTGCCGCTGATAGCATCGACGT
TGACTATGATGCTGTGTCGCGGGCGCTAGTGGTCTCCGGGTACTGGGGCC
AGCCTGTTACTCCGGAGGGATGGACGGAGGAGATTCGTGCGCCGGGGAGG
GATCGTGATCGCGTGGAGGTCGGGTTGTTGGGGACGGAGAAGGCGGTCGA
GGCGGAGGAGATTAAGGTTGGTGGGTTGTTGGGTGTTGTGGGTGTTGATA
AGGAGTTGAGTATGTTTTCCCTTTCCTCTATTTGTTTGGCTGAGGGGATA
GTGGTGTGCTAACTGCTCAGAACCAACGCTATTCTCCTTCCCCTCCAGAC
ACCATGTCCTCCCTCGCGAGGCGACTTTCGACGTCTCCTTCCCCCGTCCG
ACGGGCACGCATCCAACCATGACCATTTCCCTGTCCCCGGCTGCGTTGGA
GTACCCCGCTGCGCCGGAGGACACGACCTGTGCGCTGCATGCGTATCTGA
CGCTGCCGTCGTATATCTTCGGGGACAAGTACCAGCTGAGCACGGATGAT
CCGCTGTTCCTGGAGTCGCATCATCTGGTGGCGTTGCGGGCAGTGAGCGG
GGCAACGGACCTGGAGGCGCCGGATTGGTTTGTCCCGCACTGGGGCTCGA
ATTGGCTGCTCGAGCTGGCGACGCCGTCTGCTGGCCAGGTGCCAGAGGAG
TGGAACGTCACGGTGCCGCTGCATCTGCGGTACCTGCGGCCGTCGGAGAG
TGGGTACCGCTCCGCGGGGGTGCCGTGGCCGGTGGTGTTCTGGGCTTGCA
CGGCGGAAGAGGGCACGAAGATGGGCACAAACCCGTTCGATCGCCTGAAC
CTCGGCTGGGATGGGATGTTTGGCCCACGGACGATGTTCTACCAGGTGCA
TCCTAGTGGAGAGAAGACCCGACATGTCGAAGACTTGGATGTCCCGGTGC
TCCGGTTAGAGGAGGGCGGATTCTTCAGTAGCAAGACAGTGGAGCTGGGC
ACGATGGCAGCGATCGTCCTGGGATTGCTGTGGGTGCTGTGGAAGCTGGG
TAGTGTTGCACGGTCTTCCGGACGGAAGAAGAGCGACAAGGAGAAGAAGT
CGCAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:505378..507135+ >CAN33_8655-T1 ID=CAN33_8655-T1|Name=CAN33_8655-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3969bp|location=Sequence derived from alignment at NKJJ01000012.1:505378..507135+ (Aspergillus niger FDAARGOS_311)
ATGAAAACAAGAATAACCTACCTCCAACCCCCCTCCTCGCCATTCACCTC
CACCCAAGCGACCCTCACCCCGTCATCACTCAAGATCAGCGATCTAGATG
CTGCAAAAGAAGTCCGCGTTACGGTTGATCTGAGTGAGGTGGATGATGAT
GAGGACTCATTCACCAGCCCTCCCGTTGTCTCTACGCGTTTCGCGTCCAC
GTCCACGTATCAATTCCACTCTTCCCTGCCGGAACATAATCTTGGGGAGT
ATATAGTGAAGAATATCTGTCGCGAGGAGGGTGCTGCGTGCGCTGCGGAA
TGGGGTGCCGCTGATAGCATCGACGTTGACTATGATGCTGTGTCGCGGGC
GCTAGTGGTCTCCGGGTACTGGGGCCAGCCTGTTACTCCGGAGGGATGGA
CGGAGGAGATTCGTGCGCCGGGGAGGGATCGTGATCGCGTGGAGGTCGGG
TTGTTGGGGACGGAGAAGGCGGTCGAGGCGGAGGAGATTAAGGTTGGTGG
GTTGTTGGGTGTTGTGGGTGTTGATAAGGAGTTGAAACCAACGCTATTCT
CCTTCCCCTCCAGACACCATGTCCTCCCTCGCGAGGCGACTTTCGACGTC
TCCTTCCCCCGTCCGACGGGCACGCATCCAACCATGACCATTTCCCTGTC
CCCGGCTGCGTTGGAGTACCCCGCTGCGCCGGAGGACACGACCTGTGCGC
TGCATGCGTATCTGACGCTGCCGTCGTATATCTTCGGGGACAAGTACCAG
CTGAGCACGGATGATCCGCTGTTCCTGGAGTCGCATCATCTGGTGGCGTT
GCGGGCAGTGAGCGGGGCAACGGACCTGGAGGCGCCGGATTGGTTTGTCC
CGCACTGGGGCTCGAATTGGCTGCTCGAGCTGGCGACGCCGTCTGCTGGC
CAGGTGCCAGAGGAGTGGAACGTCACGGTGCCGCTGCATCTGCGGTACCT
GCGGCCGTCGGAGAGTGGGTACCGCTCCGCGGGGGTGCCGTGGCCGGTGG
TGTTCTGGGCTTGCACGGCGGAAGAGGGCACGAAGATGGGCACAAACCCG
TTCGATCGCCTGAACCTCGGCTGGGATGGGATGTTTGGCCCACGGACGAT
GTTCTACCAGGTGCATCCTAGTGGAGAGAAGACCCGACATGTCGAAGACT
TGGATGTCCCGGTGCTCCGGTTAGAGGAGGGCGGATTCTTCAGTAGCAAG
ACAGTGGAGCTGGGCACGATGGCAGCGATCGTCCTGGGATTGCTGTGGGT
GCTGTGGAAGCTGGGTAGTGTTGCACGGTCTTCCGGACGGAAGAAGAGCG
ACAAGGAGAAGAAGTCGCAGTAAATGAAAACAAGAATAACCTACCTCCAA
CCCCCCTCCTCGCCATTCACCTCCACCCAAGCGACCCTCACCCCGTCATC
ACTCAAGATCAGCGATCTAGATGCTGCAAAAGAAGTCCGCGTTACGGTTG
ATCTGAGTGAGGTGGATGATGATGAGGACTCATTCACCAGCCCTCCCGTT
GTCTCTACGCGTTTCGCGTCCACGTCCACGTATCAATTCCACTCTTCCCT
GCCGGAACATAATCTTGGGGAGTATATAGTGAAGAATATCTGTCGCGAGG
AGGGTGCTGCGTGCGCTGCGGAATGGGGTGCCGCTGATAGCATCGACGTT
GACTATGATGCTGTGTCGCGGGCGCTAGTGGTCTCCGGGTACTGGGGCCA
GCCTGTTACTCCGGAGGGATGGACGGAGGAGATTCGTGCGCCGGGGAGGG
ATCGTGATCGCGTGGAGGTCGGGTTGTTGGGGACGGAGAAGGCGGTCGAG
GCGGAGGAGATTAAGGTTGGTGGGTTGTTGGGTGTTGTGGGTGTTGATAA
GGAGTTGAAACCAACGCTATTCTCCTTCCCCTCCAGACACCATGTCCTCC
CTCGCGAGGCGACTTTCGACGTCTCCTTCCCCCGTCCGACGGGCACGCAT
CCAACCATGACCATTTCCCTGTCCCCGGCTGCGTTGGAGTACCCCGCTGC
GCCGGAGGACACGACCTGTGCGCTGCATGCGTATCTGACGCTGCCGTCGT
ATATCTTCGGGGACAAGTACCAGCTGAGCACGGATGATCCGCTGTTCCTG
GAGTCGCATCATCTGGTGGCGTTGCGGGCAGTGAGCGGGGCAACGGACCT
GGAGGCGCCGGATTGGTTTGTCCCGCACTGGGGCTCGAATTGGCTGCTCG
AGCTGGCGACGCCGTCTGCTGGCCAGGTGCCAGAGGAGTGGAACGTCACG
GTGCCGCTGCATCTGCGGTACCTGCGGCCGTCGGAGAGTGGGTACCGCTC
CGCGGGGGTGCCGTGGCCGGTGGTGTTCTGGGCTTGCACGGCGGAAGAGG
GCACGAAGATGGGCACAAACCCGTTCGATCGCCTGAACCTCGGCTGGGAT
GGGATGTTTGGCCCACGGACGATGTTCTACCAGGTGCATCCTAGTGGAGA
GAAGACCCGACATGTCGAAGACTTGGATGTCCCGGTGCTCCGGTTAGAGG
AGGGCGGATTCTTCAGTAGCAAGACAGTGGAGCTGGGCACGATGGCAGCG
ATCGTCCTGGGATTGCTGTGGGTGCTGTGGAAGCTGGGTAGTGTTGCACG
GTCTTCCGGACGGAAGAAGAGCGACAAGGAGAAGAAGTCGCAGTAAATGA
AAACAAGAATAACCTACCTCCAACCCCCCTCCTCGCCATTCACCTCCACC
CAAGCGACCCTCACCCCGTCATCACTCAAGATCAGCGATCTAGATGCTGC
AAAAGAAGTCCGCGTTACGGTTGATCTGAGTGAGGTGGATGATGATGAGG
ACTCATTCACCAGCCCTCCCGTTGTCTCTACGCGTTTCGCGTCCACGTCC
ACGTATCAATTCCACTCTTCCCTGCCGGAACATAATCTTGGGGAGTATAT
AGTGAAGAATATCTGTCGCGAGGAGGGTGCTGCGTGCGCTGCGGAATGGG
GTGCCGCTGATAGCATCGACGTTGACTATGATGCTGTGTCGCGGGCGCTA
GTGGTCTCCGGGTACTGGGGCCAGCCTGTTACTCCGGAGGGATGGACGGA
GGAGATTCGTGCGCCGGGGAGGGATCGTGATCGCGTGGAGGTCGGGTTGT
TGGGGACGGAGAAGGCGGTCGAGGCGGAGGAGATTAAGGTTGGTGGGTTG
TTGGGTGTTGTGGGTGTTGATAAGGAGTTGAAACCAACGCTATTCTCCTT
CCCCTCCAGACACCATGTCCTCCCTCGCGAGGCGACTTTCGACGTCTCCT
TCCCCCGTCCGACGGGCACGCATCCAACCATGACCATTTCCCTGTCCCCG
GCTGCGTTGGAGTACCCCGCTGCGCCGGAGGACACGACCTGTGCGCTGCA
TGCGTATCTGACGCTGCCGTCGTATATCTTCGGGGACAAGTACCAGCTGA
GCACGGATGATCCGCTGTTCCTGGAGTCGCATCATCTGGTGGCGTTGCGG
GCAGTGAGCGGGGCAACGGACCTGGAGGCGCCGGATTGGTTTGTCCCGCA
CTGGGGCTCGAATTGGCTGCTCGAGCTGGCGACGCCGTCTGCTGGCCAGG
TGCCAGAGGAGTGGAACGTCACGGTGCCGCTGCATCTGCGGTACCTGCGG
CCGTCGGAGAGTGGGTACCGCTCCGCGGGGGTGCCGTGGCCGGTGGTGTT
CTGGGCTTGCACGGCGGAAGAGGGCACGAAGATGGGCACAAACCCGTTCG
ATCGCCTGAACCTCGGCTGGGATGGGATGTTTGGCCCACGGACGATGTTC
TACCAGGTGCATCCTAGTGGAGAGAAGACCCGACATGTCGAAGACTTGGA
TGTCCCGGTGCTCCGGTTAGAGGAGGGCGGATTCTTCAGTAGCAAGACAG
TGGAGCTGGGCACGATGGCAGCGATCGTCCTGGGATTGCTGTGGGTGCTG
TGGAAGCTGGGTAGTGTTGCACGGTCTTCCGGACGGAAGAAGAGCGACAA
GGAGAAGAAGTCGCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005789 | endoplasmic reticulum membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006506 | GPI anchor biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013233 |
| DBxref | PFAM:PF08320 |
| Product | PIG-X / PBN1 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:505378..507135 + |
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