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CAN33_8805-T1, CAN33_8805-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_8805-T1
Unique NameCAN33_8805-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:588256..589797-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_8805-T1 ID=CAN33_8805-T1|Name=CAN33_8805-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1542bp|location=Sequence derived from alignment at NKJJ01000012.1:588256..589797- (Aspergillus niger FDAARGOS_311)
ATGCCTCCCCGGAAGCAGTGGATGTAGGTTGCCCCTCCACATTCACCTAC
TCAAATCTATGTACCCAACTAACCCACTCTCAGCGACAAGAAAACCGCAA
CTACCTACCAACTCTTCCACCGTTCCCAACATGACCCTCTCATTCACGAT
CCCTCTGCTGACGACCGCGTCCTGCACCCTGTCTACGGTCCTCCCATCAC
CCCCAGTGAATCTTCCTCCGCCTCCAAGCACCGCGGCCAAAGTCTCGCCG
AGCTGAATCAAACCTTCGGCGATGCCGCGCGCAAAAACGAAGGTGAAGCC
GCCAACTACGGCATTTTCTACGATGACTCGCAATACGACTACATGCAGCA
CTTGCGCGAGCTGGGCACCGGCGCCGGCGACGCTTACTTCGTCGAAGCCA
AGACGAAGGGCAAGGACAAGGGCAAAGGATTGAAGCTGGAGGATGCTTTG
AAACAGGTATCGCTGGATGATGGGCGAAGCGAGTTTGGTGGCACCGAAAG
CGTCTACAGCTATGACATGCGCTCGACGGCGTCTTCCTACGTGCGCAAAC
CCACCTACCAGGACCAGCAGAACGTGCCCGATGCTATTGCGGGTTTCCAG
CCGGATATGGACCCGCGGTTGCGCGAAGCCTTGGAGGCGCTGGAGGACGA
GGAGTACGTGGATGAAGATGACGAGGAGGACGTCTTCGGCCAGTTGACTA
CGCGGGCAGAGGAAATGGACCAGGGTGATTGGGAGGATACCATCTTCGAC
GATGTCGAGGAAGAAGACGATGGATGGGAATCCGATGCGACAGAAAAGGC
CCCCGTGCAGATGGACACCACGGCCGCAAAGGCCCGCTACCAAGCCTCAG
AGCAGGAGGATAAGCCCGGCGAGCTTCCCGAACACAACGAGCCCGCGCCC
GACATGCACCCCGAAGACCAAGGCTGGATGCGCGAATTCGCCAAGTTCAA
GAAGGACGCCAAGTCTGGCAAAACAGCCGGCGTCCCCGCCGGTCCTCCCA
GCGTCGTCCCCTCCCATCAGGGCAGCACCCTCGCCTCGACCGTGTTCACC
GTCGGAGGCACCCCCATCCGCCGCAAGAAGCGCAAGGGCGCCCTCACCAA
CCCCTCCGCCTACTCCATGACTTCGTCCTCCCTCGCCCGTACAGAAGGCC
ACCGTCTCCTCGACGACCGCTTCGAGCGCGTCGAAGCCCTCTACTCCCTC
GACGAGGAGGATGAGTTCGACGACAACATGTCCATGGTCAGTGGAATGAC
CGGTATGACCGGTATGACTGGTGTCTCGGGCATTTCGACTGCCTCGTCTC
AGGCACCGAGTCTCGTTGACGCGAACGGTGATGCCGTTCGTCCTTCCCAC
AACTTCAACAACATCATGGATGATTTCCTTGCTGGGTGGGATGACAAGAC
GAGTTCCCAGGCTAAGCGGAAGGGCGCAAAGGCGAAGCGCGGAAAGAACG
GTAATGAGGCGATTGGCATTCGCATGCTGGATGAGGTTCGGCAGGGATTG
GGCCCTGCTAGGGTTACTGGGAAGGTGTCGGGCAGGGCGTAG
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Coding sequence (CDS) from alignment at NKJJ01000012.1:588256..589797-

>CAN33_8805-T1 ID=CAN33_8805-T1|Name=CAN33_8805-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4095bp|location=Sequence derived from alignment at NKJJ01000012.1:588256..589797- (Aspergillus niger FDAARGOS_311)
AGGAAATGGACCAGGGTGATTGGGAGGATACCATCTTCGACGATGTCGAG
GAAGAAGACGATGGATGGGAATCCGATGCGACAGAAAAGGCCCCCGTGCA
GATGGACACCACGGCCGCAAAGGCCCGCTACCAAGCCTCAGAGCAGGAGG
ATAAGCCCGGCGAGCTTCCCGAACACAACGAGCCCGCGCCCGACATGCAC
CCCGAAGACCAAGGCTGGATGCGCGAATTCGCCAAGTTCAAGAAGGACGC
CAAGTCTGGCAAAACAGCCGGCGTCCCCGCCGGTCCTCCCAGCGTCGTCC
CCTCCCATCAGGGCAGCACCCTCGCCTCGACCGTGTTCACCGTCGGAGGC
ACCCCCATCCGCCGCAAGAAGCGCAAGGGCGCCCTCACCAACCCCTCCGC
CTACTCCATGACTTCGTCCTCCCTCGCCCGTACAGAAGGCCACCGTCTCC
TCGACGACCGCTTCGAGCGCGTCGAAGCCCTCTACTCCCTCGACGAGGAG
GATGAGTTCGACGACAACATGTCCATGGTCAGTGGAATGACCGGTATGAC
CGGTATGACTGGTGTCTCGGGCATTTCGACTGCCTCGTCTCAGGCACCGA
GTCTCGTTGACGCGAACGGTGATGCCGTTCGTCCTTCCCACAACTTCAAC
AACATCATGGATGATTTCCTTGCTGGGTGGGATGACAAGACGAGTTCCCA
GGCTAAGCGGAAGGGCGCAAAGGCGAAGCGCGGAAAGAACGGTAATGAGG
CGATTGGCATTCGCATGCTGGATGAGGTTCGGCAGGGATTGGGCCCTGCT
AGGGTTACTGGGAAGGTGTCGGGCAGGGCGTAGCGACAAGAAAACCGCAA
CTACCTACCAACTCTTCCACCGTTCCCAACATGACCCTCTCATTCACGAT
CCCTCTGCTGACGACCGCGTCCTGCACCCTGTCTACGGTCCTCCCATCAC
CCCCAGTGAATCTTCCTCCGCCTCCAAGCACCGCGGCCAAAGTCTCGCCG
AGCTGAATCAAACCTTCGGCGATGCCGCGCGCAAAAACGAAGGTGAAGCC
GCCAACTACGGCATTTTCTACGATGACTCGCAATACGACTACATGCAGCA
CTTGCGCGAGCTGGGCACCGGCGCCGGCGACGCTTACTTCGTCGAAGCCA
AGACGAAGGGCAAGGACAAGGGCAAAGGATTGAAGCTGGAGGATGCTTTG
AAACAGGTATCGCTGGATGATGGGCGAAGCGAGTTTGGTGGCACCGAAAG
CGTCTACAGCTATGACATGCGCTCGACGGCGTCTTCCTACGTGCGCAAAC
CCACCTACCAGGACCAGCAGAACGTGCCCGATGCTATTGCGGATGCCTCC
CCGGAAGCAGTGGATAGGAAATGGACCAGGGTGATTGGGAGGATACCATC
TTCGACGATGTCGAGGAAGAAGACGATGGATGGGAATCCGATGCGACAGA
AAAGGCCCCCGTGCAGATGGACACCACGGCCGCAAAGGCCCGCTACCAAG
CCTCAGAGCAGGAGGATAAGCCCGGCGAGCTTCCCGAACACAACGAGCCC
GCGCCCGACATGCACCCCGAAGACCAAGGCTGGATGCGCGAATTCGCCAA
GTTCAAGAAGGACGCCAAGTCTGGCAAAACAGCCGGCGTCCCCGCCGGTC
CTCCCAGCGTCGTCCCCTCCCATCAGGGCAGCACCCTCGCCTCGACCGTG
TTCACCGTCGGAGGCACCCCCATCCGCCGCAAGAAGCGCAAGGGCGCCCT
CACCAACCCCTCCGCCTACTCCATGACTTCGTCCTCCCTCGCCCGTACAG
AAGGCCACCGTCTCCTCGACGACCGCTTCGAGCGCGTCGAAGCCCTCTAC
TCCCTCGACGAGGAGGATGAGTTCGACGACAACATGTCCATGGTCAGTGG
AATGACCGGTATGACCGGTATGACTGGTGTCTCGGGCATTTCGACTGCCT
CGTCTCAGGCACCGAGTCTCGTTGACGCGAACGGTGATGCCGTTCGTCCT
TCCCACAACTTCAACAACATCATGGATGATTTCCTTGCTGGGTGGGATGA
CAAGACGAGTTCCCAGGCTAAGCGGAAGGGCGCAAAGGCGAAGCGCGGAA
AGAACGGTAATGAGGCGATTGGCATTCGCATGCTGGATGAGGTTCGGCAG
GGATTGGGCCCTGCTAGGGTTACTGGGAAGGTGTCGGGCAGGGCGTAGCG
ACAAGAAAACCGCAACTACCTACCAACTCTTCCACCGTTCCCAACATGAC
CCTCTCATTCACGATCCCTCTGCTGACGACCGCGTCCTGCACCCTGTCTA
CGGTCCTCCCATCACCCCCAGTGAATCTTCCTCCGCCTCCAAGCACCGCG
GCCAAAGTCTCGCCGAGCTGAATCAAACCTTCGGCGATGCCGCGCGCAAA
AACGAAGGTGAAGCCGCCAACTACGGCATTTTCTACGATGACTCGCAATA
CGACTACATGCAGCACTTGCGCGAGCTGGGCACCGGCGCCGGCGACGCTT
ACTTCGTCGAAGCCAAGACGAAGGGCAAGGACAAGGGCAAAGGATTGAAG
CTGGAGGATGCTTTGAAACAGGTATCGCTGGATGATGGGCGAAGCGAGTT
TGGTGGCACCGAAAGCGTCTACAGCTATGACATGCGCTCGACGGCGTCTT
CCTACGTGCGCAAACCCACCTACCAGGACCAGCAGAACGTGCCCGATGCT
ATTGCGGATGCCTCCCCGGAAGCAGTGGATAGGAAATGGACCAGGGTGAT
TGGGAGGATACCATCTTCGACGATGTCGAGGAAGAAGACGATGGATGGGA
ATCCGATGCGACAGAAAAGGCCCCCGTGCAGATGGACACCACGGCCGCAA
AGGCCCGCTACCAAGCCTCAGAGCAGGAGGATAAGCCCGGCGAGCTTCCC
GAACACAACGAGCCCGCGCCCGACATGCACCCCGAAGACCAAGGCTGGAT
GCGCGAATTCGCCAAGTTCAAGAAGGACGCCAAGTCTGGCAAAACAGCCG
GCGTCCCCGCCGGTCCTCCCAGCGTCGTCCCCTCCCATCAGGGCAGCACC
CTCGCCTCGACCGTGTTCACCGTCGGAGGCACCCCCATCCGCCGCAAGAA
GCGCAAGGGCGCCCTCACCAACCCCTCCGCCTACTCCATGACTTCGTCCT
CCCTCGCCCGTACAGAAGGCCACCGTCTCCTCGACGACCGCTTCGAGCGC
GTCGAAGCCCTCTACTCCCTCGACGAGGAGGATGAGTTCGACGACAACAT
GTCCATGGTCAGTGGAATGACCGGTATGACCGGTATGACTGGTGTCTCGG
GCATTTCGACTGCCTCGTCTCAGGCACCGAGTCTCGTTGACGCGAACGGT
GATGCCGTTCGTCCTTCCCACAACTTCAACAACATCATGGATGATTTCCT
TGCTGGGTGGGATGACAAGACGAGTTCCCAGGCTAAGCGGAAGGGCGCAA
AGGCGAAGCGCGGAAAGAACGGTAATGAGGCGATTGGCATTCGCATGCTG
GATGAGGTTCGGCAGGGATTGGGCCCTGCTAGGGTTACTGGGAAGGTGTC
GGGCAGGGCGTAGCGACAAGAAAACCGCAACTACCTACCAACTCTTCCAC
CGTTCCCAACATGACCCTCTCATTCACGATCCCTCTGCTGACGACCGCGT
CCTGCACCCTGTCTACGGTCCTCCCATCACCCCCAGTGAATCTTCCTCCG
CCTCCAAGCACCGCGGCCAAAGTCTCGCCGAGCTGAATCAAACCTTCGGC
GATGCCGCGCGCAAAAACGAAGGTGAAGCCGCCAACTACGGCATTTTCTA
CGATGACTCGCAATACGACTACATGCAGCACTTGCGCGAGCTGGGCACCG
GCGCCGGCGACGCTTACTTCGTCGAAGCCAAGACGAAGGGCAAGGACAAG
GGCAAAGGATTGAAGCTGGAGGATGCTTTGAAACAGGTATCGCTGGATGA
TGGGCGAAGCGAGTTTGGTGGCACCGAAAGCGTCTACAGCTATGACATGC
GCTCGACGGCGTCTTCCTACGTGCGCAAACCCACCTACCAGGACCAGCAG
AACGTGCCCGATGCTATTGCGGATGCCTCCCCGGAAGCAGTGGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042274ribosomal small subunit biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_8805CAN33_8805Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8805-T1CAN33_8805-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8805-T1.cdsCAN33_8805-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8805-T1.exon3CAN33_8805-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_8805-T1.exon2CAN33_8805-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_8805-T1.exon1CAN33_8805-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09262VVF
DBxrefInterPro:IPR007307
ProductLow temperature viability protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:588256..589797 -
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