|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:590272..592266+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_8810-T1 ID=CAN33_8810-T1|Name=CAN33_8810-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1995bp|location=Sequence derived from alignment at NKJJ01000012.1:590272..592266+ (Aspergillus niger FDAARGOS_311)
ATGGTGCTCGCCAAATCCAAGAACTCCGTCGGGCTGGGCAACAGCCTGAT
GAACGACCGTTTCGGCAAAGGCAAGGCCTCCTCCATGAAAAAGGCCTCGC
ACAATGCCGGCATTGCCCGCAAGAACGAAAAGGGCGAGACCTACATCACC
AACGCTCCCACCGAAGCTGCCTGGGTGAAGATGCGCAGTATTACCGAGCA
GGCTGCCCTCGATGAGTTCCTCAGTACCGCCGAACTGGCCGGCACCGATT
TCACCGCCGAGAAGATGAACAACGTCAAGATCATCCACACCGACCAGAAG
AATCCCTACCTGCTGTCCGCTGCCGAAGAGAAGTCCGCCGTGAAGAAGCA
CAAGCAGAACAAGAACCGTCTTACCGTTCCCCGTCGGCCCAAGTGGGACC
AGTCCACCACCCGTCAGCAACTGGAGCTGATGGAGCGCGAGAGTTTCCTG
AACTGGCGTCGTGGCCTGGCCGAGTTGCAGGAGAACCAGGATCTGTTGAT
GACTCCTTTCGAGCGCAACTTGGAGGTCTGGCGCCAGCTGTGGCGTGTTA
TTGAACGTTCCGATTTGGTGGTCCAGATTGTCGATGCCCGTAACCCGCTG
CTCTACCGCTCTGAGGATCTGGAAAGCTACGTCAAGGAGATCGACCCCAA
GAAGCAAAACCTGCTGCTTGTCAACAAGGCCGACATGCTGACTGAGGCCC
AACGTGCCATGTGGGCTGACCACTTTGAGCGCCAGAACATCAGCTTCCGT
TTCTTCTCCGCCCATCTGGCCAAGGAGCGCAACGAACGCCTCCAGCAGGG
TCTTGATTCGGAGGACGAAAGCGAAGAGGACATTCCCGAGGAGGAGCAGT
TGGCTGAGGGTGCCAAGTCTCTGGACATTAAGGACGGCGAAGAGCCTCAA
GAAGAGCACGACGGTGGTCTTGAACTCAACCCCAGCGCCAGCTCCAGCTC
TTCCCGACGCACAGAGATTCTTGACGTCGAAGAACTGGAAGAGCTCTTCC
TTTCCAATACCCCCGAAACTCTTCCCGACAACGACTCGCCCGAGGGGCCG
GTCAAGAAGAAGACGACCATCGGTCTGGTCGGATACCCCAACGTCGGTAA
ATCCAGCACGATCAACGCCCTGCTCGGTGCCAAGAAGGTCTCCGTTTCCG
CCACCCCCGGTAAGACCAAGCACTTCCAGACTCTTTACCTGTCTCCCGAG
ATCATGCTTTGCGATTGTCCCGGTCTCGTCTTCCCCAACTTTGCCACCAC
CAAGGCTGAGCTGGTCGTCAACGGTGTGCTCCCCATCGACCAGCAGCGCG
AGTTTACCGGCCCGGCCGCCCTCGTCGCCCAGCGCATTCCCAAGCACTTT
GTCGAGAACGTCTACGGCGTGAAGATCAACACCCGCCCCATCGAAGAAGG
AGGAACTGGCATCCCCACTTCCCACGAACTTCTTCGCGCCTATGCCCGCG
CCCGTGGCTTCGCCACCACCGGCCAGGGTCAGCCCGACGAGTCGCGCGCG
GCTCGTTACATTCTCAAGGACTACGTCAACGGAAAGCTCCTCTTCTGCCA
CCCGCCGCCCACGCCCGAAGGCTCCGACCCCATTGACCCTATTGAATTCA
ACAAAGACCTCTACGACATGGCTCACCTACCGGCCCGGCGACAAGCGCAA
CTCGCCAAAATGCTCCAGAACGAGGAGGTCACAGACCCGGAACTGCTCGC
TCTCCTCAAGCCGGTCGAGAAGGGCGCGCGATCCCGCAACCTCGACTCGG
GTTTCTTCGGCCCCGGCGCCAAGTCCTCCACCGGCCGTCTCACCCTTCCT
TTCAATGCCCAGTACACGGAGCAGGGCCAGGAGATGCGCAAGCAGCTGAC
AGGTCGTAAGGAGCGCATGATGGTTGCTTTGGAGCGCGGAGTCGATGTAT
CGGAGGTGAAGAGCGGTTCGTCGAAGAAGCATTTCAAGGCGAATAAGCGG
CGGGCTAAGAAGGTGCGCAAGAATGCGGCGGATGAGGATTATTAG back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:590272..592266+ >CAN33_8810-T1 ID=CAN33_8810-T1|Name=CAN33_8810-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1995bp|location=Sequence derived from alignment at NKJJ01000012.1:590272..592266+ (Aspergillus niger FDAARGOS_311)
ATGGTGCTCGCCAAATCCAAGAACTCCGTCGGGCTGGGCAACAGCCTGAT
GAACGACCGTTTCGGCAAAGGCAAGGCCTCCTCCATGAAAAAGGCCTCGC
ACAATGCCGGCATTGCCCGCAAGAACGAAAAGGGCGAGACCTACATCACC
AACGCTCCCACCGAAGCTGCCTGGGTGAAGATGCGCAGTATTACCGAGCA
GGCTGCCCTCGATGAGTTCCTCAGTACCGCCGAACTGGCCGGCACCGATT
TCACCGCCGAGAAGATGAACAACGTCAAGATCATCCACACCGACCAGAAG
AATCCCTACCTGCTGTCCGCTGCCGAAGAGAAGTCCGCCGTGAAGAAGCA
CAAGCAGAACAAGAACCGTCTTACCGTTCCCCGTCGGCCCAAGTGGGACC
AGTCCACCACCCGTCAGCAACTGGAGCTGATGGAGCGCGAGAGTTTCCTG
AACTGGCGTCGTGGCCTGGCCGAGTTGCAGGAGAACCAGGATCTGTTGAT
GACTCCTTTCGAGCGCAACTTGGAGGTCTGGCGCCAGCTGTGGCGTGTTA
TTGAACGTTCCGATTTGGTGGTCCAGATTGTCGATGCCCGTAACCCGCTG
CTCTACCGCTCTGAGGATCTGGAAAGCTACGTCAAGGAGATCGACCCCAA
GAAGCAAAACCTGCTGCTTGTCAACAAGGCCGACATGCTGACTGAGGCCC
AACGTGCCATGTGGGCTGACCACTTTGAGCGCCAGAACATCAGCTTCCGT
TTCTTCTCCGCCCATCTGGCCAAGGAGCGCAACGAACGCCTCCAGCAGGG
TCTTGATTCGGAGGACGAAAGCGAAGAGGACATTCCCGAGGAGGAGCAGT
TGGCTGAGGGTGCCAAGTCTCTGGACATTAAGGACGGCGAAGAGCCTCAA
GAAGAGCACGACGGTGGTCTTGAACTCAACCCCAGCGCCAGCTCCAGCTC
TTCCCGACGCACAGAGATTCTTGACGTCGAAGAACTGGAAGAGCTCTTCC
TTTCCAATACCCCCGAAACTCTTCCCGACAACGACTCGCCCGAGGGGCCG
GTCAAGAAGAAGACGACCATCGGTCTGGTCGGATACCCCAACGTCGGTAA
ATCCAGCACGATCAACGCCCTGCTCGGTGCCAAGAAGGTCTCCGTTTCCG
CCACCCCCGGTAAGACCAAGCACTTCCAGACTCTTTACCTGTCTCCCGAG
ATCATGCTTTGCGATTGTCCCGGTCTCGTCTTCCCCAACTTTGCCACCAC
CAAGGCTGAGCTGGTCGTCAACGGTGTGCTCCCCATCGACCAGCAGCGCG
AGTTTACCGGCCCGGCCGCCCTCGTCGCCCAGCGCATTCCCAAGCACTTT
GTCGAGAACGTCTACGGCGTGAAGATCAACACCCGCCCCATCGAAGAAGG
AGGAACTGGCATCCCCACTTCCCACGAACTTCTTCGCGCCTATGCCCGCG
CCCGTGGCTTCGCCACCACCGGCCAGGGTCAGCCCGACGAGTCGCGCGCG
GCTCGTTACATTCTCAAGGACTACGTCAACGGAAAGCTCCTCTTCTGCCA
CCCGCCGCCCACGCCCGAAGGCTCCGACCCCATTGACCCTATTGAATTCA
ACAAAGACCTCTACGACATGGCTCACCTACCGGCCCGGCGACAAGCGCAA
CTCGCCAAAATGCTCCAGAACGAGGAGGTCACAGACCCGGAACTGCTCGC
TCTCCTCAAGCCGGTCGAGAAGGGCGCGCGATCCCGCAACCTCGACTCGG
GTTTCTTCGGCCCCGGCGCCAAGTCCTCCACCGGCCGTCTCACCCTTCCT
TTCAATGCCCAGTACACGGAGCAGGGCCAGGAGATGCGCAAGCAGCTGAC
AGGTCGTAAGGAGCGCATGATGGTTGCTTTGGAGCGCGGAGTCGATGTAT
CGGAGGTGAAGAGCGGTTCGTCGAAGAAGCATTTCAAGGCGAATAAGCGG
CGGGCTAAGAAGGTGCGCAAGAATGCGGCGGATGAGGATTATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262I5I |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR030378 |
| DBxref | InterPro:IPR006073 |
| Product | 50S ribosome-binding GTPase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:590272..592266 + |
|
