|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:657593..658724+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_8895-T1 ID=CAN33_8895-T1|Name=CAN33_8895-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1132bp|location=Sequence derived from alignment at NKJJ01000012.1:657593..658724+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGGTAAGTCGTGTGTGCGTTTTCTGGTTTTGTGTCCTATTCCTCCTCC
CTGTCTCCCCCCAATCGGTTTGCGAAAGGGGTTTCCTTTCTACCTGCATT
GTATCTGCTCGTTTATTCCTGTCTTACAATGTTTATTCATCACGGATTGG
AATCGTCGGAGAGCTGGAGGATGGGATGAAGTCGTGTTGTTGTTCTCCGA
TTTCTGCCTACTTGCATATTTCTCAGCCGCCAGTTTCGAAGCTAAACTAA
CCATCTCCTCTTCACACTTTAGCTCTCCAAGTACCCTGTCCTCAACAACT
TGGAGCGCCAGACCTCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTC
GGCGTCTACTTCTTCTTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGT
CAACCTCGCTGGTTTCCTCATCCCTGGTTACTACTCCCTGAACGCTCTGT
TCACCGCCGGAAAGGCCGACGACACACAGGTATGCTCCATCTCTTTATTC
CCTACTGTTTTCTTAGATGATAATTGTGCTGATGATCGTGACCCTGCGTT
TAGTGGTTGACGGTATGTTTCTCGTGATCCCCGTTATCGCGACATGACTC
GGGCGTTTCATACGCCTAGGTTATCTTTCTGCACGTGACGACGTGCGCTC
GTCAGCTAGCGGTTATACTGATTGGCATGTGATTCTTCTAGTACTGGGTT
GTTTACGCCTTCTTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTG
GTTCCGTAAGTATTCGCAACGTTTGATGTGATTCCTACAGTGGAAAGTAC
ATAAACTGATCGCGACGCTTCAACACAGCCTTCTACTATATCTTCAAGTT
CGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAAGTAAGCTATCCACT
TCCCGCAGCTCCGAAACCCATTATTATTATCATCACCAGAACTCCGACTG
ACCCTCTTCTCCAGCGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCC
CGTGCTCGGCCGCTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCG
CCCAGGCCGAGGCTGCTGCTAAGGACCAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:657593..658724+ >CAN33_8895-T1 ID=CAN33_8895-T1|Name=CAN33_8895-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3060bp|location=Sequence derived from alignment at NKJJ01000012.1:657593..658724+ (Aspergillus niger FDAARGOS_311)
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCG
TCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTG
GTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCT
CATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCG
ACGACACACAGTGGTTGACGTACTGGGTTGTTTACGCCTTCTTCACCGTC
ATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTT
CAAGTTCGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTC
AAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAG
GGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAA
GGACCAGTAAATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCC
AGCTCGACAAGGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGC
CAGACCTCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTA
CTTCTTCTTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCG
CTGGTTTCCTCATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCC
GGAAAGGCCGACGACACACAGTGGTTGACGTACTGGGTTGTTTACGCCTT
CTTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCT
ACTATATCTTCAAGTTCGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACC
AACGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCG
CTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGG
CTGCTGCTAAGGACCAGTAAATGGCCTCTTTCCAGGATCGTGCTCAGCAC
GCCATTGCCCAGCTCGACAAGGAGCTCTCCAAGTACCCTGTCCTCAACAA
CTTGGAGCGCCAGACCTCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGG
TCGGCGTCTACTTCTTCTTGGTCTTCTTCAACATCGCCGGTGAATTCCTC
GTCAACCTCGCTGGTTTCCTCATCCCTGGTTACTACTCCCTGAACGCTCT
GTTCACCGCCGGAAAGGCCGACGACACACAGTGGTTGACGTACTGGGTTG
TTTACGCCTTCTTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTGG
TTCCCCTTCTACTATATCTTCAAGTTCGCCCTTGTCCTCTGGATGTCTCT
TCCCCAGACCAACGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCCCG
TGCTCGGCCGCTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCGCC
CAGGCCGAGGCTGCTGCTAAGGACCAGTAAATGGCCTCTTTCCAGGATCG
TGCTCAGCACGCCATTGCCCAGCTCGACAAGGAGCTCTCCAAGTACCCTG
TCCTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGTCTACGTGATC
CTGGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCAACATCGCCGG
TGAATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGTTACTACTCCC
TGAACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACAGTGGTTGACG
TACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGAGCGCCATCTCTGC
CCCCTACTGGTTCCCCTTCTACTATATCTTCAAGTTCGCCCTTGTCCTCT
GGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTTGTCTTCCACTCCTTC
ATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTTCCACTTCGGCCAA
CCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAGTAAATGGCCTCTT
TCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAAGGAGCTCTCC
AAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGT
CTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCA
ACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGT
TACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACA
GTGGTTGACGTACTGGGTTGTTTACGCCTTCTTCACCGTCATTGAGAGCG
CCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTTCAAGTTCGCC
CTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTCAAGTTGTCTT
CCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAGGGCGGTTCCA
CTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAAGGACCAGTAA
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGCTCTCCAAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCG
TCCCCAAGGTCTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTG
GTCTTCTTCAACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCT
CATCCCTGGTTACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCG
ACGACACACAGTGGTTGACGTACTGGGTTGTTTACGCCTTCTTCACCGTC
ATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCCTTCTACTATATCTT
CAAGTTCGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAACGGTGCTC
AAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCTTCTTCCAG
GGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCTGCTGCTAA
GGACCAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264USX |
| DBxref | InterPro:IPR004345 |
| DBxref | PFAM:PF03134 |
| Product | ER membrane protein DP1/Yop1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:657593..658724 + |
|
