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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:668450..670084+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_8915-T1 ID=CAN33_8915-T1|Name=CAN33_8915-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1635bp|location=Sequence derived from alignment at NKJJ01000012.1:668450..670084+ (Aspergillus niger FDAARGOS_311)
ATGCCGTCCGATAAGGTTGAAAAGAAGCGCAAGCGCGCTTCCGATCGCCA
TGAGAGGCCCAGCAAGAAGCCCGCGCTTGAGCTGCAAGATCTGCCTCCGC
TGGCCTCCAGCGTCGTCGAGGATGATAGCGAACTAGCTCCGGTGATCAGT
ATGCTGCACCTTTTCACACATTAACTTTCTTACCTTCACGGCATATTCAT
ATGAAATGGGAAAGGTCTAATATAATCCACTGCAGTCACTACTCCCGGTC
TCAACGCCCCGCGCAATCTCCGCCTCAACCCATACCTCAAGACCCGCAGC
AAAACCTCCTCCTCGTCGTCACGGAACAAGGGCATCGTCTCATCGGAATT
GCTGCTACAGTCCTCCGAGCACCCCAAGCTGGACTTCGTGGGTCGCGAGG
CCGAGGAGGATGCCGACTCCCAACTGAAGCACTACGTCGCGGTCGTGGAC
CCGGAGAACAAAACCTGGCAGTTCATCGAAGTGCGGAAGATGACTCTGCG
TGGCGCCGTTCGCAAGATGAGAGCCATTGAAGAAGAGGAAGAGGAGGAGA
GTGACGAGGAAGAAATGGTACGCTCAATCCTCTCCTCTACGCTCTTCACT
CGGACTATAAGCTGACCCTTCACCCTTCAAATAGAAAACTATGCGCGCTC
AAAGAACAGAGCTCACCAACACCTTCGGTACCAAACAATCCCGCAAGGCC
GCTCAATCGCTTGCCGAAAACGCCCAGCTCTCCAACGTGCCCTCAGGCGC
CGCCTCCGCCGCTGAAACCGCCATTCTGGGCGCAATGCCCGCCGACGCAG
CCACAGATATCGCCTCCAAGACCGCCGCCCTGCAAGCGCAGGTTCAAGCC
GCGAAGCCTCTGCCCCAGGCTAACCTGGACGCCGCGCACCCGTCAGAAGT
CTACCCACTTGATGTCCTCGTCCCCAACGGCCTGGCCACTCTGCGCCAAC
TTCCCAACATCAAAGAATGGCAAGACAGCGTTAACTCCGGCGCCGCCGTC
AACACCACCTCGCGGTACGTCTCCCGCCGCGTCGAAGCCGTCGCCCTCTC
CGGAAACACCACCCACCTCCAAATCCTCCGCTTCATCCTCCTCCTCCTGG
AACTCGCCCGCGGTCTCCGTCCCGGCCGCGACAAGTCCGCCGGCCCAGGC
AGCAAGCGTCTTCCTCCCCGCGAAGACCTCCGCCGCATCCTCTCCGGTGG
AACAACCAGCGAGAACTCCGCCAGCGGCGAACAGCTCGCGGACCCCGTCA
TCGACGCCGTGCGCCGCAAGTTCGCGCCCCAGGGTGCTTCCCTCTCCAAG
AACGACATCACCTTCCTCCACACTACCATCTGCGCCCTGTCGCTGCACAT
CCCACCCCAACCTTCCAAGGATGGCGGCAATAGCTCCGCCGGCGGAAACG
CCCCAACGAGCTGGCCACCGATCCCTCGGATCTCCGTGATGATCTGCGCC
TGGATAACGTCGCTATCACGCAGTACTTCCGCGAGTTGGGCTGCCGCGTC
GACAAGCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATCAAGGGTGGTAA
GGCTGAGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGATTCCAGTTGAGT
TCCCGAAGGTTAGTCGTGGTGGTGGACGGAGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:668450..670084+ >CAN33_8915-T1 ID=CAN33_8915-T1|Name=CAN33_8915-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6225bp|location=Sequence derived from alignment at NKJJ01000012.1:668450..670084+ (Aspergillus niger FDAARGOS_311)
ATGCCGTCCGATAAGGTTGAAAAGAAGCGCAAGCGCGCTTCCGATCGCCA
TGAGAGGCCCAGCAAGAAGCCCGCGCTTGAGCTGCAAGATCTGCCTCCGC
TGGCCTCCAGCGTCGTCGAGGATGATAGCGAACTAGCTCCGGTGATCATC
ACTACTCCCGGTCTCAACGCCCCGCGCAATCTCCGCCTCAACCCATACCT
CAAGACCCGCAGCAAAACCTCCTCCTCGTCGTCACGGAACAAGGGCATCG
TCTCATCGGAATTGCTGCTACAGTCCTCCGAGCACCCCAAGCTGGACTTC
GTGGGTCGCGAGGCCGAGGAGGATGCCGACTCCCAACTGAAGCACTACGT
CGCGGTCGTGGACCCGGAGAACAAAACCTGGCAGTTCATCGAAGTGCGGA
AGATGACTCTGCGTGGCGCCAAAACTATGCGCGCTCAAAGAACAGAGCTC
ACCAACACCTTCGGTACCAAACAATCCCGCAAGGCCGCTCAATCGCTTGC
CGAAAACGCCCAGCTCTCCAACGTGCCCTCAGGCGCCGCCTCCGCCGCTG
AAACCGCCATTCTGGGCGCAATGCCCGCCGACGCAGCCACAGATATCGCC
TCCAAGACCGCCGCCCTGCAAGCGCAGGTTCAAGCCGCGAAGCCTCTGCC
CCAGGCTAACCTGGACGCCGCGCACCCGTCAGAAGTCTACCCACTTGATG
TCCTCGTCCCCAACGGCCTGGCCACTCTGCGCCAACTTCCCAACATCAAA
GAATGGCAAGACAGCGTTAACTCCGGCGCCGCCGTCAACACCACCTCGCG
CAAGCGTCTTCCTCCCCGCGAAGACCTCCGCCGCATCCTCTCCGGTGGAA
CAACCAGCGAGAACTCCGCCAGCGGCGAACAGCTCGCGGACCCCGTCATC
GACGCCGTGCGCCGCAAGTTCGCGCCCCAGGGTGCTTCCCTCTCCAAGAA
CGACATCACCTTCCTCCACACTACCATCTGCGCCCTGTCGCTGCACATCC
CACCCCAACCTTCCAAGGATGGCGGCAATAGCTCCGCCGGCGGAAACGCC
CCAACGAGCTGGCCACCGATCCCTCGGATCTCCTACTTCCGCGAGTTGGG
CTGCCGCGTCGACAAGCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATCA
AGGGTGGTAAGGCTGAGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGATT
CCAGTTGAGTTCCCGAAGGTTAGTCGTGGTGGTGGACGGAGGTAGATGCC
GTCCGATAAGGTTGAAAAGAAGCGCAAGCGCGCTTCCGATCGCCATGAGA
GGCCCAGCAAGAAGCCCGCGCTTGAGCTGCAAGATCTGCCTCCGCTGGCC
TCCAGCGTCGTCGAGGATGATAGCGAACTAGCTCCGGTGATCATCACTAC
TCCCGGTCTCAACGCCCCGCGCAATCTCCGCCTCAACCCATACCTCAAGA
CCCGCAGCAAAACCTCCTCCTCGTCGTCACGGAACAAGGGCATCGTCTCA
TCGGAATTGCTGCTACAGTCCTCCGAGCACCCCAAGCTGGACTTCGTGGG
TCGCGAGGCCGAGGAGGATGCCGACTCCCAACTGAAGCACTACGTCGCGG
TCGTGGACCCGGAGAACAAAACCTGGCAGTTCATCGAAGTGCGGAAGATG
ACTCTGCGTGGCGCCAAAACTATGCGCGCTCAAAGAACAGAGCTCACCAA
CACCTTCGGTACCAAACAATCCCGCAAGGCCGCTCAATCGCTTGCCGAAA
ACGCCCAGCTCTCCAACGTGCCCTCAGGCGCCGCCTCCGCCGCTGAAACC
GCCATTCTGGGCGCAATGCCCGCCGACGCAGCCACAGATATCGCCTCCAA
GACCGCCGCCCTGCAAGCGCAGGTTCAAGCCGCGAAGCCTCTGCCCCAGG
CTAACCTGGACGCCGCGCACCCGTCAGAAGTCTACCCACTTGATGTCCTC
GTCCCCAACGGCCTGGCCACTCTGCGCCAACTTCCCAACATCAAAGAATG
GCAAGACAGCGTTAACTCCGGCGCCGCCGTCAACACCACCTCGCGCAAGC
GTCTTCCTCCCCGCGAAGACCTCCGCCGCATCCTCTCCGGTGGAACAACC
AGCGAGAACTCCGCCAGCGGCGAACAGCTCGCGGACCCCGTCATCGACGC
CGTGCGCCGCAAGTTCGCGCCCCAGGGTGCTTCCCTCTCCAAGAACGACA
TCACCTTCCTCCACACTACCATCTGCGCCCTGTCGCTGCACATCCCACCC
CAACCTTCCAAGGATGGCGGCAATAGCTCCGCCGGCGGAAACGCCCCAAC
GAGCTGGCCACCGATCCCTCGGATCTCCTACTTCCGCGAGTTGGGCTGCC
GCGTCGACAAGCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATCAAGGGT
GGTAAGGCTGAGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGATTCCAGT
TGAGTTCCCGAAGGTTAGTCGTGGTGGTGGACGGAGGTAGATGCCGTCCG
ATAAGGTTGAAAAGAAGCGCAAGCGCGCTTCCGATCGCCATGAGAGGCCC
AGCAAGAAGCCCGCGCTTGAGCTGCAAGATCTGCCTCCGCTGGCCTCCAG
CGTCGTCGAGGATGATAGCGAACTAGCTCCGGTGATCATCACTACTCCCG
GTCTCAACGCCCCGCGCAATCTCCGCCTCAACCCATACCTCAAGACCCGC
AGCAAAACCTCCTCCTCGTCGTCACGGAACAAGGGCATCGTCTCATCGGA
ATTGCTGCTACAGTCCTCCGAGCACCCCAAGCTGGACTTCGTGGGTCGCG
AGGCCGAGGAGGATGCCGACTCCCAACTGAAGCACTACGTCGCGGTCGTG
GACCCGGAGAACAAAACCTGGCAGTTCATCGAAGTGCGGAAGATGACTCT
GCGTGGCGCCAAAACTATGCGCGCTCAAAGAACAGAGCTCACCAACACCT
TCGGTACCAAACAATCCCGCAAGGCCGCTCAATCGCTTGCCGAAAACGCC
CAGCTCTCCAACGTGCCCTCAGGCGCCGCCTCCGCCGCTGAAACCGCCAT
TCTGGGCGCAATGCCCGCCGACGCAGCCACAGATATCGCCTCCAAGACCG
CCGCCCTGCAAGCGCAGGTTCAAGCCGCGAAGCCTCTGCCCCAGGCTAAC
CTGGACGCCGCGCACCCGTCAGAAGTCTACCCACTTGATGTCCTCGTCCC
CAACGGCCTGGCCACTCTGCGCCAACTTCCCAACATCAAAGAATGGCAAG
ACAGCGTTAACTCCGGCGCCGCCGTCAACACCACCTCGCGCAAGCGTCTT
CCTCCCCGCGAAGACCTCCGCCGCATCCTCTCCGGTGGAACAACCAGCGA
GAACTCCGCCAGCGGCGAACAGCTCGCGGACCCCGTCATCGACGCCGTGC
GCCGCAAGTTCGCGCCCCAGGGTGCTTCCCTCTCCAAGAACGACATCACC
TTCCTCCACACTACCATCTGCGCCCTGTCGCTGCACATCCCACCCCAACC
TTCCAAGGATGGCGGCAATAGCTCCGCCGGCGGAAACGCCCCAACGAGCT
GGCCACCGATCCCTCGGATCTCCTACTTCCGCGAGTTGGGCTGCCGCGTC
GACAAGCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATCAAGGGTGGTAA
GGCTGAGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGATTCCAGTTGAGT
TCCCGAAGGTTAGTCGTGGTGGTGGACGGAGGTAGATGCCGTCCGATAAG
GTTGAAAAGAAGCGCAAGCGCGCTTCCGATCGCCATGAGAGGCCCAGCAA
GAAGCCCGCGCTTGAGCTGCAAGATCTGCCTCCGCTGGCCTCCAGCGTCG
TCGAGGATGATAGCGAACTAGCTCCGGTGATCATCACTACTCCCGGTCTC
AACGCCCCGCGCAATCTCCGCCTCAACCCATACCTCAAGACCCGCAGCAA
AACCTCCTCCTCGTCGTCACGGAACAAGGGCATCGTCTCATCGGAATTGC
TGCTACAGTCCTCCGAGCACCCCAAGCTGGACTTCGTGGGTCGCGAGGCC
GAGGAGGATGCCGACTCCCAACTGAAGCACTACGTCGCGGTCGTGGACCC
GGAGAACAAAACCTGGCAGTTCATCGAAGTGCGGAAGATGACTCTGCGTG
GCGCCAAAACTATGCGCGCTCAAAGAACAGAGCTCACCAACACCTTCGGT
ACCAAACAATCCCGCAAGGCCGCTCAATCGCTTGCCGAAAACGCCCAGCT
CTCCAACGTGCCCTCAGGCGCCGCCTCCGCCGCTGAAACCGCCATTCTGG
GCGCAATGCCCGCCGACGCAGCCACAGATATCGCCTCCAAGACCGCCGCC
CTGCAAGCGCAGGTTCAAGCCGCGAAGCCTCTGCCCCAGGCTAACCTGGA
CGCCGCGCACCCGTCAGAAGTCTACCCACTTGATGTCCTCGTCCCCAACG
GCCTGGCCACTCTGCGCCAACTTCCCAACATCAAAGAATGGCAAGACAGC
GTTAACTCCGGCGCCGCCGTCAACACCACCTCGCGCAAGCGTCTTCCTCC
CCGCGAAGACCTCCGCCGCATCCTCTCCGGTGGAACAACCAGCGAGAACT
CCGCCAGCGGCGAACAGCTCGCGGACCCCGTCATCGACGCCGTGCGCCGC
AAGTTCGCGCCCCAGGGTGCTTCCCTCTCCAAGAACGACATCACCTTCCT
CCACACTACCATCTGCGCCCTGTCGCTGCACATCCCACCCCAACCTTCCA
AGGATGGCGGCAATAGCTCCGCCGGCGGAAACGCCCCAACGAGCTGGCCA
CCGATCCCTCGGATCTCCTACTTCCGCGAGTTGGGCTGCCGCGTCGACAA
GCCCCGCGAGTCGGAGTTTGCTAAATGGGGTATCAAGGGTGGTAAGGCTG
AGGCTGCGGCTAGACGGGTTGCTAGGTTGAAGATTCCAGTTGAGTTCCCG
AAGGTTAGTCGTGGTGGTGGACGGAGGTAGATGCCGTCCGATAAGGTTGA
AAAGAAGCGCAAGCGCGCTTCCGATCGCCATGAGAGGCCCAGCAAGAAGC
CCGCGCTTGAGCTGCAAGATCTGCCTCCGCTGGCCTCCAGCGTCGTCGAG
GATGATAGCGAACTAGCTCCGGTGATCATCACTACTCCCGGTCTCAACGC
CCCGCGCAATCTCCGCCTCAACCCATACCTCAAGACCCGCAGCAAAACCT
CCTCCTCGTCGTCACGGAACAAGGGCATCGTCTCATCGGAATTGCTGCTA
CAGTCCTCCGAGCACCCCAAGCTGGACTTCGTGGGTCGCGAGGCCGAGGA
GGATGCCGACTCCCAACTGAAGCACTACGTCGCGGTCGTGGACCCGGAGA
ACAAAACCTGGCAGTTCATCGAAGTGCGGAAGATGACTCTGCGTGGCGCC
AAAACTATGCGCGCTCAAAGAACAGAGCTCACCAACACCTTCGGTACCAA
ACAATCCCGCAAGGCCGCTCAATCGCTTGCCGAAAACGCCCAGCTCTCCA
ACGTGCCCTCAGGCGCCGCCTCCGCCGCTGAAACCGCCATTCTGGGCGCA
ATGCCCGCCGACGCAGCCACAGATATCGCCTCCAAGACCGCCGCCCTGCA
AGCGCAGGTTCAAGCCGCGAAGCCTCTGCCCCAGGCTAACCTGGACGCCG
CGCACCCGTCAGAAGTCTACCCACTTGATGTCCTCGTCCCCAACGGCCTG
GCCACTCTGCGCCAACTTCCCAACATCAAAGAATGGCAAGACAGCGTTAA
CTCCGGCGCCGCCGTCAACACCACCTCGCGCAAGCGTCTTCCTCCCCGCG
AAGACCTCCGCCGCATCCTCTCCGGTGGAACAACCAGCGAGAACTCCGCC
AGCGGCGAACAGCTCGCGGACCCCGTCATCGACGCCGTGCGCCGCAAGTT
CGCGCCCCAGGGTGCTTCCCTCTCCAAGAACGACATCACCTTCCTCCACA
CTACCATCTGCGCCCTGTCGCTGCACATCCCACCCCAACCTTCCAAGGAT
GGCGGCAATAGCTCCGCCGGCGGAAACGCCCCAACGAGCTGGCCACCGAT
CCCTCGGATCTCCTACTTCCGCGAGTTGGGCTGCCGCGTCGACAAGCCCC
GCGAGTCGGAGTTTGCTAAATGGGGTATCAAGGGTGGTAAGGCTGAGGCT
GCGGCTAGACGGGTTGCTAGGTTGAAGATTCCAGTTGAGTTCCCGAAGGT
TAGTCGTGGTGGTGGACGGAGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262BVA |
| DBxref | InterPro:IPR009668 |
| Product | A49-like RNA polymerase I associated factor family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:668450..670084 + |
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