You are here

Home

CAN33_8975-T1, CAN33_8975-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_8975-T1
Unique NameCAN33_8975-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:713477..714907+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_8975-T1 ID=CAN33_8975-T1|Name=CAN33_8975-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1431bp|location=Sequence derived from alignment at NKJJ01000012.1:713477..714907+ (Aspergillus niger FDAARGOS_311)
ATGCAGGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGC
CACGCAGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGA
CTGTGAACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGT
TTCACTGGAAAGCAGGGAACGTACGTCTTTTTTGCCCGATCCGCAGGGAA
CGCTGTTTATCATGCATGACATGCTGACATTGCCATTTTTCGTCTTTCCG
CAGTTTCCACGCTGAGCAAGCTATCGCCTATGGTATTATCTCTTCCTACG
TCTGCACCAATTAGATAGGTGTCTCCGGCGGTTTCACATGGGAAACTCAC
AACTGCTAGGCACCAAGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGC
TCGATGCACCTTGACCGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAA
GGAGACTGGAGCTACCGCTACTGCTCTCTTCGTCCCGTATGCATCCGGTG
TCTTAATCGAGGAAAGAAGGATCATTTGCTAATTCCATGACTCTAGCCCC
CCTTGGCCGCTAAGGGTATCGAGGAGGCCATCGAGGCCGAAATTCCTCTG
GCTGTCTGGTAGGCGACTCCTTCTCAATGACGATAGAACAACCCAGCATG
TGCTAACAACCGGGATAGTATCACCGAGGGTATCCCTCAGCACGGTATGT
TTATTAGCCATGACTTAGCGTCGACGATCTCTGCATGTTGGGTGTAGGAC
TGACCAACAATCAACCAGACATGGTTCGTATCACCGATATCCTGAAGACG
CAGAACAAGACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCC
TGTAAGTCGCATCCAAAAACCACTAGGCGATCCTTTTGGACAGGGGTCAA
GATATTAATGGTGAAATTTGCGATGTGTAGGGCCAATGCAAGATTGGTAT
CATGCCTGGATTCATTCACAAGCGTGGACGTATCGGTATTGTGTCTCGGT
CCGGTACCCTGACCTACGAGGCCGTCAACCAGACCACCCAGGCTGGTCTT
GGTCAGTCCCTGGTCGTCGGTATCGGTGGTGACCCCTTCTCCGGCACCAA
CTTCATCGACTGCCTGAAGATCTTCCTCGAGGACGAGGAGACCGACGGTA
TCATCATGATTGGTGAGATCGGTGGTAGCGCCGAGGAGGATGCTGCCGAG
TTCCTCAAGGCCAACAACAAGTACAACAAGCCCGCCGTTGGTTTCATCGC
CGGCATTAGCGCTCCCCCGGGCCGTCGTATGGGTCACGCCGGAGCCATCG
TCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGATCGCCGCTCTCGAGGCG
GCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCCTGGGCAAGGCCCTCCT
GAACGAATTCGTCAAGAGGGACCTGGTCTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000012.1:713477..714907+

>CAN33_8975-T1 ID=CAN33_8975-T1|Name=CAN33_8975-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6951bp|location=Sequence derived from alignment at NKJJ01000012.1:713477..714907+ (Aspergillus niger FDAARGOS_311)
ATGCAGGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGC
CACGCAGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGA
CTGTGAACAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGT
TTCACTGGAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGG
CACCAAGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACC
TTGACCGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGA
GCTACCGCTACTGCTCTCTTCCCCCCCTTGGCCGCTAAGGGTATCGAGGA
GGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGAGGGTATCC
CTCAGCACGACATGGTTCGTATCACCGATATCCTGAAGACGCAGAACAAG
ACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCTGGCCAATG
CAAGATTGGTATCATGCCTGGATTCATTCACAAGCGTGGACGTATCGGTA
TTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCCGTCAACCAGACCACC
CAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGACCCCTT
CTCCGGCACCAACTTCATCGACTGCCTGAAGATCTTCCTCGAGGACGAGG
AGACCGACGGTATCATCATGATTGGTGAGATCGGTGGTAGCGCCGAGGAG
GATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTACAACAAGCCCGCCGT
TGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTATGGGTCACG
CCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGATCGCC
GCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCCTGGG
CAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTAGATGCAGG
CCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGCCACGCAG
CGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGACTGTGAA
CAACCTTCGCATTAATGGAGACACCAAGGTTATCTTCCAGGGTTTCACTG
GAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGGCACCAAG
GTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACCTTGACCG
TCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGAGCTACCG
CTACTGCTCTCTTCCCCCCCTTGGCCGCTAAGGGTATCGAGGAGGCCATC
GAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGAGGGTATCCCTCAGCA
CGACATGGTTCGTATCACCGATATCCTGAAGACGCAGAACAAGACCCGTC
TGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCTGGCCAATGCAAGATT
GGTATCATGCCTGGATTCATTCACAAGCGTGGACGTATCGGTATTGTGTC
TCGGTCCGGTACCCTGACCTACGAGGCCGTCAACCAGACCACCCAGGCTG
GTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGTGACCCCTTCTCCGGC
ACCAACTTCATCGACTGCCTGAAGATCTTCCTCGAGGACGAGGAGACCGA
CGGTATCATCATGATTGGTGAGATCGGTGGTAGCGCCGAGGAGGATGCTG
CCGAGTTCCTCAAGGCCAACAACAAGTACAACAAGCCCGCCGTTGGTTTC
ATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTATGGGTCACGCCGGAGC
CATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTAAGATCGCCGCTCTCG
AGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCCTGGGCAAGGCC
CTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTAGATGCAGGCCGTCCG
CCGTAACACCGTCGCTGCCCTTCGCAATGCTGCTGCCACGCAGCGCCGGG
CATACTCTGCCTCGGCCAGCCCGGCTTACGCTGAGACTGTGAACAACCTT
CGCATTAATGGAGACACCAAGGTTATCTTCCAGGGTTTCACTGGAAAGCA
GGGAACTTTCCACGCTGAGCAAGCTATCGCCTATGGCACCAAGGTCGTTG
GTGGAACCAACCCGAAGAAGGCCGGCTCGATGCACCTTGACCGTCCCGTC
TTCGCGAACGTGAGCGAGGCCGTTAAGGAGACTGGAGCTACCGCTACTGC
TCTCTTCCCCCCCTTGGCCGCTAAGGGTATCGAGGAGGCCATCGAGGCCG
AAATTCCTCTGGCTGTCTGTATCACCGAGGGTATCCCTCAGCACGACATG
GTTCGTATCACCGATATCCTGAAGACGCAGAACAAGACCCGTCTGGTGGG
TCCTAACTGCCCTGGTATCATCGCTCCTGGCCAATGCAAGATTGGTATCA
TGCCTGGATTCATTCACAAGCGTGGACGTATCGGTATTGTGTCTCGGTCC
GGTACCCTGACCTACGAGGCCGTCAACCAGACCACCCAGGCTGGTCTTGG
TCAGTCCCTGGTCGTCGGTATCGGTGGTGACCCCTTCTCCGGCACCAACT
TCATCGACTGCCTGAAGATCTTCCTCGAGGACGAGGAGACCGACGGTATC
ATCATGATTGGTGAGATCGGTGGTAGCGCCGAGGAGGATGCTGCCGAGTT
CCTCAAGGCCAACAACAAGTACAACAAGCCCGCCGTTGGTTTCATCGCCG
GCATTAGCGCTCCCCCGGGCCGTCGTATGGGTCACGCCGGAGCCATCGTC
AGCGGCGGCAAGGGTGGCGCTGACTCTAAGATCGCCGCTCTCGAGGCGGC
TGGTGTTGTTGTCGAGCGCAGCCCCGCTTCCCTGGGCAAGGCCCTCCTGA
ACGAATTCGTCAAGAGGGACCTGGTCTAGATGCAGGCCGTCCGCCGTAAC
ACCGTCGCTGCCCTTCGCAATGCTGCTGCCACGCAGCGCCGGGCATACTC
TGCCTCGGCCAGCCCGGCTTACGCTGAGACTGTGAACAACCTTCGCATTA
ATGGAGACACCAAGGTTATCTTCCAGGGTTTCACTGGAAAGCAGGGAACT
TTCCACGCTGAGCAAGCTATCGCCTATGGCACCAAGGTCGTTGGTGGAAC
CAACCCGAAGAAGGCCGGCTCGATGCACCTTGACCGTCCCGTCTTCGCGA
ACGTGAGCGAGGCCGTTAAGGAGACTGGAGCTACCGCTACTGCTCTCTTC
CCCCCCTTGGCCGCTAAGGGTATCGAGGAGGCCATCGAGGCCGAAATTCC
TCTGGCTGTCTGTATCACCGAGGGTATCCCTCAGCACGACATGGTTCGTA
TCACCGATATCCTGAAGACGCAGAACAAGACCCGTCTGGTGGGTCCTAAC
TGCCCTGGTATCATCGCTCCTGGCCAATGCAAGATTGGTATCATGCCTGG
ATTCATTCACAAGCGTGGACGTATCGGTATTGTGTCTCGGTCCGGTACCC
TGACCTACGAGGCCGTCAACCAGACCACCCAGGCTGGTCTTGGTCAGTCC
CTGGTCGTCGGTATCGGTGGTGACCCCTTCTCCGGCACCAACTTCATCGA
CTGCCTGAAGATCTTCCTCGAGGACGAGGAGACCGACGGTATCATCATGA
TTGGTGAGATCGGTGGTAGCGCCGAGGAGGATGCTGCCGAGTTCCTCAAG
GCCAACAACAAGTACAACAAGCCCGCCGTTGGTTTCATCGCCGGCATTAG
CGCTCCCCCGGGCCGTCGTATGGGTCACGCCGGAGCCATCGTCAGCGGCG
GCAAGGGTGGCGCTGACTCTAAGATCGCCGCTCTCGAGGCGGCTGGTGTT
GTTGTCGAGCGCAGCCCCGCTTCCCTGGGCAAGGCCCTCCTGAACGAATT
CGTCAAGAGGGACCTGGTCTAGATGCAGGCCGTCCGCCGTAACACCGTCG
CTGCCCTTCGCAATGCTGCTGCCACGCAGCGCCGGGCATACTCTGCCTCG
GCCAGCCCGGCTTACGCTGAGACTGTGAACAACCTTCGCATTAATGGAGA
CACCAAGGTTATCTTCCAGGGTTTCACTGGAAAGCAGGGAACTTTCCACG
CTGAGCAAGCTATCGCCTATGGCACCAAGGTCGTTGGTGGAACCAACCCG
AAGAAGGCCGGCTCGATGCACCTTGACCGTCCCGTCTTCGCGAACGTGAG
CGAGGCCGTTAAGGAGACTGGAGCTACCGCTACTGCTCTCTTCCCCCCCT
TGGCCGCTAAGGGTATCGAGGAGGCCATCGAGGCCGAAATTCCTCTGGCT
GTCTGTATCACCGAGGGTATCCCTCAGCACGACATGGTTCGTATCACCGA
TATCCTGAAGACGCAGAACAAGACCCGTCTGGTGGGTCCTAACTGCCCTG
GTATCATCGCTCCTGGCCAATGCAAGATTGGTATCATGCCTGGATTCATT
CACAAGCGTGGACGTATCGGTATTGTGTCTCGGTCCGGTACCCTGACCTA
CGAGGCCGTCAACCAGACCACCCAGGCTGGTCTTGGTCAGTCCCTGGTCG
TCGGTATCGGTGGTGACCCCTTCTCCGGCACCAACTTCATCGACTGCCTG
AAGATCTTCCTCGAGGACGAGGAGACCGACGGTATCATCATGATTGGTGA
GATCGGTGGTAGCGCCGAGGAGGATGCTGCCGAGTTCCTCAAGGCCAACA
ACAAGTACAACAAGCCCGCCGTTGGTTTCATCGCCGGCATTAGCGCTCCC
CCGGGCCGTCGTATGGGTCACGCCGGAGCCATCGTCAGCGGCGGCAAGGG
TGGCGCTGACTCTAAGATCGCCGCTCTCGAGGCGGCTGGTGTTGTTGTCG
AGCGCAGCCCCGCTTCCCTGGGCAAGGCCCTCCTGAACGAATTCGTCAAG
AGGGACCTGGTCTAGATGCAGGCCGTCCGCCGTAACACCGTCGCTGCCCT
TCGCAATGCTGCTGCCACGCAGCGCCGGGCATACTCTGCCTCGGCCAGCC
CGGCTTACGCTGAGACTGTGAACAACCTTCGCATTAATGGAGACACCAAG
GTTATCTTCCAGGGTTTCACTGGAAAGCAGGGAACTTTCCACGCTGAGCA
AGCTATCGCCTATGGCACCAAGGTCGTTGGTGGAACCAACCCGAAGAAGG
CCGGCTCGATGCACCTTGACCGTCCCGTCTTCGCGAACGTGAGCGAGGCC
GTTAAGGAGACTGGAGCTACCGCTACTGCTCTCTTCCCCCCCTTGGCCGC
TAAGGGTATCGAGGAGGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTA
TCACCGAGGGTATCCCTCAGCACGACATGGTTCGTATCACCGATATCCTG
AAGACGCAGAACAAGACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCAT
CGCTCCTGGCCAATGCAAGATTGGTATCATGCCTGGATTCATTCACAAGC
GTGGACGTATCGGTATTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCC
GTCAACCAGACCACCCAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTAT
CGGTGGTGACCCCTTCTCCGGCACCAACTTCATCGACTGCCTGAAGATCT
TCCTCGAGGACGAGGAGACCGACGGTATCATCATGATTGGTGAGATCGGT
GGTAGCGCCGAGGAGGATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTA
CAACAAGCCCGCCGTTGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCC
GTCGTATGGGTCACGCCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCT
GACTCTAAGATCGCCGCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAG
CCCCGCTTCCCTGGGCAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACC
TGGTCTAGATGCAGGCCGTCCGCCGTAACACCGTCGCTGCCCTTCGCAAT
GCTGCTGCCACGCAGCGCCGGGCATACTCTGCCTCGGCCAGCCCGGCTTA
CGCTGAGACTGTGAACAACCTTCGCATTAATGGAGACACCAAGGTTATCT
TCCAGGGTTTCACTGGAAAGCAGGGAACTTTCCACGCTGAGCAAGCTATC
GCCTATGGCACCAAGGTCGTTGGTGGAACCAACCCGAAGAAGGCCGGCTC
GATGCACCTTGACCGTCCCGTCTTCGCGAACGTGAGCGAGGCCGTTAAGG
AGACTGGAGCTACCGCTACTGCTCTCTTCCCCCCCTTGGCCGCTAAGGGT
ATCGAGGAGGCCATCGAGGCCGAAATTCCTCTGGCTGTCTGTATCACCGA
GGGTATCCCTCAGCACGACATGGTTCGTATCACCGATATCCTGAAGACGC
AGAACAAGACCCGTCTGGTGGGTCCTAACTGCCCTGGTATCATCGCTCCT
GGCCAATGCAAGATTGGTATCATGCCTGGATTCATTCACAAGCGTGGACG
TATCGGTATTGTGTCTCGGTCCGGTACCCTGACCTACGAGGCCGTCAACC
AGACCACCCAGGCTGGTCTTGGTCAGTCCCTGGTCGTCGGTATCGGTGGT
GACCCCTTCTCCGGCACCAACTTCATCGACTGCCTGAAGATCTTCCTCGA
GGACGAGGAGACCGACGGTATCATCATGATTGGTGAGATCGGTGGTAGCG
CCGAGGAGGATGCTGCCGAGTTCCTCAAGGCCAACAACAAGTACAACAAG
CCCGCCGTTGGTTTCATCGCCGGCATTAGCGCTCCCCCGGGCCGTCGTAT
GGGTCACGCCGGAGCCATCGTCAGCGGCGGCAAGGGTGGCGCTGACTCTA
AGATCGCCGCTCTCGAGGCGGCTGGTGTTGTTGTCGAGCGCAGCCCCGCT
TCCCTGGGCAAGGCCCTCCTGAACGAATTCGTCAAGAGGGACCTGGTCTA
G
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0048037obsolete cofactor binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TCA8CAN33_8975Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8975-T1CAN33_8975-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8975-T1.exon1CAN33_8975-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_8975-T1.exon2CAN33_8975-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_8975-T1.exon3CAN33_8975-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_8975-T1.exon4CAN33_8975-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_8975-T1.exon5CAN33_8975-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_8975-T1.exon6CAN33_8975-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_8975-T1.exon7CAN33_8975-T1.exon7Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_8975-T1.cdsCAN33_8975-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteBUSCO:EOG092638CT
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR017440
DBxrefInterPro:IPR033847
DBxrefInterPro:IPR016102
DBxrefInterPro:IPR005811
DBxrefInterPro:IPR005810
DBxrefInterPro:IPR003781
DBxrefPFAM:PF13607
DBxrefPFAM:PF00549
DBxrefPFAM:PF02629
Product mitochondrial
ProductSuccinate--CoA ligase [ADP-forming] subunit alpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:713477..714907 +
Powered by Drupal