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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000012.1:751527..753069- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_9025-T1 ID=CAN33_9025-T1|Name=CAN33_9025-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1543bp|location=Sequence derived from alignment at NKJJ01000012.1:751527..753069- (Aspergillus niger FDAARGOS_311) ATGAAGCTCACGTTTAAGGTACGCGTGATTCCTACCCCACCCCCTCTACT
TATCCTCGAGTCTGACATGTTCGTTCTCTCCCTCTAGGACCTGAAACAAC
AAAAGTTTGTAATCGATGCAGAGCCCTCAGAGACGGTAGGCGGTTCCTTT
CTCTCAGCGTCGTGACTTTGCCGGCGTCAGTGCGGGGCTAAATGAATTAT
CCGACAGGTCGGGCAAGTGAAGGAAAAGATCTCCAAGGAGAAGGGATGGG
AGGTTCCTCAGCTTAAGCTCATCTACTCTGGTAAGTAAAGCAACTTTGGC
GTCCTACACTTGCTGCTCTATTTCCGATAGCCTTCTGCCACTCTGTTTGG
CCGGTATTTCAGCGCTGACCGTTCTTCCCCCCAACAGGAAAGATCCTTCA
GGATGACAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTCATAG
TGTGCATGGTCTCTAAGGTACGTACACCCTAGGCCAAGGATATATTTCGT
ATGAATGAAGGACTAAATTCTCGTGGTGTAGCCCAAGGCTACTTCCTCCG
GCACCTCGTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTACC
CCTGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGGC
TGTTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAGG
GCTCCGCATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGAG
GCTGTCGTGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAAA
CCGTGCAATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATACC
TTTTGAATGTGAGTTCATGGCGCTGGTAGCCGGCTATTGGGTTGCCCGAT
CTTGCGCTGACTTTAAGCAGGGTATTCCGGAAAACATCCAACAGGAACAG
CAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAG
CGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTG
CTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGT
GGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCA
GCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTCGAACCCATCC
TCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAA
AATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGAGCCTGATGATGATGA
GGCGCTCCCCCCTGGTACGACTCAAATTCATGTTACGGAAGAAGAGAGAG
ATGCCATTGAACGTGTGCGTATAATATACTCTGGTAATTCCTTGTGGAAA
TGTAGCTGACATGTTTCTGCTAGCTCTGCCGGCTTGGATTCTCTCGGGAC
TTGGTCATTCAAGCTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAGC
TAACTATCTGTTTGAGAACCCCGACGATCCCGAAGATATGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000012.1:751527..753069- >CAN33_9025-T1 ID=CAN33_9025-T1|Name=CAN33_9025-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7770bp|location=Sequence derived from alignment at NKJJ01000012.1:751527..753069- (Aspergillus niger FDAARGOS_311) CTCTGCCGGCTTGGATTCTCTCGGGACTTGGTCATTCAAGCTTATTTCGC TTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCG ACGATCCCGAAGATATGTGAGGTATTCCGGAAAACATCCAACAGGAACAG CAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAG CGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTG CTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGT GGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCA GCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTCGAACCCATCC TCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAA AATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGAGCCTGATGATGATGA GGCGCTCCCCCCTGGTACGACTCAAATTCATGTTACGGAAGAAGAGAGAG ATGCCATTGAACGTCCCAAGGCTACTTCCTCCGGCACCTCGTCACAAGCG CCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTGCGCCTCCCGC CCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCTTCGACTCCCT CCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGCATTCAATGAC CCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCGTGGCTCAGAT GGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCAATGAGGGCTG CTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAATGAAAGATCC TTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTC ATAGTGTGCATGGTCTCTAAGGTCGGGCAAGTGAAGGAAAAGATCTCCAA GGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGGACCTG AAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGACGATGAAGCT CACGTTTAAGCTCTGCCGGCTTGGATTCTCTCGGGACTTGGTCATTCAAG CTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTT GAGAACCCCGACGATCCCGAAGATATGTGAGGTATTCCGGAAAACATCCA ACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTG CTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTC GAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCG TGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACC CCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTC GAACCCATCCTCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCT CATTGGCCAAAATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGAGCCTG ATGATGATGAGGCGCTCCCCCCTGGTACGACTCAAATTCATGTTACGGAA GAAGAGAGAGATGCCATTGAACGTCCCAAGGCTACTTCCTCCGGCACCTC GTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTG CGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCT TCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGC ATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCG TGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCA ATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAA TGAAAGATCCTTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGA GAAGGGGTTCATAGTGTGCATGGTCTCTAAGGTCGGGCAAGTGAAGGAAA AGATCTCCAAGGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTAC TCTGGACCTGAAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGA CGATGAAGCTCACGTTTAAGCTCTGCCGGCTTGGATTCTCTCGGGACTTG GTCATTCAAGCTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAGCTAA CTATCTGTTTGAGAACCCCGACGATCCCGAAGATATGTGAGGTATTCCGG AAAACATCCAACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGCGCACCC CAGTCTGCTGCTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGAACCGGT CAACCTGTTCGAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAGGAGGCC GAGGAGCTCGTGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAATTTCTG CGGAATAACCCCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACAACAACC ACAAATGCTCGAACCCATCCTCCAACAAGTCGCCGCTGGAAACCCCCAAA TTGCGCAGCTCATTGGCCAAAATGAGGAACAGTTCCTACAGCTCCTGAGT GAGGAGCCTGATGATGATGAGGCGCTCCCCCCTGGTACGACTCAAATTCA TGTTACGGAAGAAGAGAGAGATGCCATTGAACGTCCCAAGGCTACTTCCT CCGGCACCTCGTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCT ACCCCTGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACC GGCTGTTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCAC AGGGCTCCGCATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGC GAGGCTGTCGTGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGT AAACCGTGCAATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAAT ACCTTTTGAATGAAAGATCCTTCAGGATGACAAGACGATCGAGTCATACA ACATCGAGGAGAAGGGGTTCATAGTGTGCATGGTCTCTAAGGTCGGGCAA GTGAAGGAAAAGATCTCCAAGGAGAAGGGATGGGAGGTTCCTCAGCTTAA GCTCATCTACTCTGGACCTGAAACAACAAAAGTTTGTAATCGATGCAGAG CCCTCAGAGACGATGAAGCTCACGTTTAAGCTCTGCCGGCTTGGATTCTC TCGGGACTTGGTCATTCAAGCTTATTTCGCTTGCGATAAGAATGAAGAGC TCGCAGCTAACTATCTGTTTGAGAACCCCGACGATCCCGAAGATATGTGA GGTATTCCGGAAAACATCCAACAGGAACAGCAGCAGCAAGCCGCCGCCGC TAGCGCACCCCAGTCTGCTGCTCCCGAAAGCGCCCCGTCCGCTGGTGACG ACGAACCGGTCAACCTGTTCGAAGCTGCTGCTCAGGCTGGTGGCCAGGAG GGAGGAGGCCGAGGAGCTCGTGCTGCCGGTGGTGCTGAACTCCCGAGCCT CGAATTTCTGCGGAATAACCCCCACTTCCAGCAGCTTCGTCAGTTGGTCC AACAACAACCACAAATGCTCGAACCCATCCTCCAACAAGTCGCCGCTGGA AACCCCCAAATTGCGCAGCTCATTGGCCAAAATGAGGAACAGTTCCTACA GCTCCTGAGTGAGGAGCCTGATGATGATGAGGCGCTCCCCCCTGGTACGA CTCAAATTCATGTTACGGAAGAAGAGAGAGATGCCATTGAACGTCCCAAG GCTACTTCCTCCGGCACCTCGTCACAAGCGCCCTCCACCCCATCCAGAGC CGTCACCTCTACCCCTGCTGCGCCTCCCGCCCCAGCCCCTTCTGCGGCTT CCACTACACCGGCTGTTCCTTCGACTCCCTCCCCGGCCGCCGCGGGGACC TCCCAGGCACAGGGCTCCGCATTCAATGACCCCTCCGCATTGCTGAGTGG CACTCAGAGCGAGGCTGTCGTGGCTCAGATGGAGGCAATGGGTTTCGCCC GGAGTGATGTAAACCGTGCAATGAGGGCTGCTTTCTTTAACCCCGATCGT GCCATCGAATACCTTTTGAATGAAAGATCCTTCAGGATGACAAGACGATC GAGTCATACAACATCGAGGAGAAGGGGTTCATAGTGTGCATGGTCTCTAA GGTCGGGCAAGTGAAGGAAAAGATCTCCAAGGAGAAGGGATGGGAGGTTC CTCAGCTTAAGCTCATCTACTCTGGACCTGAAACAACAAAAGTTTGTAAT CGATGCAGAGCCCTCAGAGACGATGAAGCTCACGTTTAAGCTCTGCCGGC TTGGATTCTCTCGGGACTTGGTCATTCAAGCTTATTTCGCTTGCGATAAG AATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCGACGATCCCGA AGATATGTGAGGTATTCCGGAAAACATCCAACAGGAACAGCAGCAGCAAG CCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAGCGCCCCGTCC GCTGGTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTGCTCAGGCTGG TGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGTGGTGCTGAAC TCCCGAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCAGCAGCTTCGT CAGTTGGTCCAACAACAACCACAAATGCTCGAACCCATCCTCCAACAAGT CGCCGCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAAAATGAGGAAC AGTTCCTACAGCTCCTGAGTGAGGAGCCTGATGATGATGAGGCGCTCCCC CCTGGTACGACTCAAATTCATGTTACGGAAGAAGAGAGAGATGCCATTGA ACGTCCCAAGGCTACTTCCTCCGGCACCTCGTCACAAGCGCCCTCCACCC CATCCAGAGCCGTCACCTCTACCCCTGCTGCGCCTCCCGCCCCAGCCCCT TCTGCGGCTTCCACTACACCGGCTGTTCCTTCGACTCCCTCCCCGGCCGC CGCGGGGACCTCCCAGGCACAGGGCTCCGCATTCAATGACCCCTCCGCAT TGCTGAGTGGCACTCAGAGCGAGGCTGTCGTGGCTCAGATGGAGGCAATG GGTTTCGCCCGGAGTGATGTAAACCGTGCAATGAGGGCTGCTTTCTTTAA CCCCGATCGTGCCATCGAATACCTTTTGAATGAAAGATCCTTCAGGATGA CAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTCATAGTGTGCA TGGTCTCTAAGGTCGGGCAAGTGAAGGAAAAGATCTCCAAGGAGAAGGGA TGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGGACCTGAAACAACAAA AGTTTGTAATCGATGCAGAGCCCTCAGAGACGATGAAGCTCACGTTTAAG CTCTGCCGGCTTGGATTCTCTCGGGACTTGGTCATTCAAGCTTATTTCGC TTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTTGAGAACCCCG ACGATCCCGAAGATATGTGAGGTATTCCGGAAAACATCCAACAGGAACAG CAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTGCTCCCGAAAG CGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTCGAAGCTGCTG CTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCGTGCTGCCGGT GGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACCCCCACTTCCA GCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTCGAACCCATCC TCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCTCATTGGCCAA AATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGAGCCTGATGATGATGA GGCGCTCCCCCCTGGTACGACTCAAATTCATGTTACGGAAGAAGAGAGAG ATGCCATTGAACGTCCCAAGGCTACTTCCTCCGGCACCTCGTCACAAGCG CCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTGCGCCTCCCGC CCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCTTCGACTCCCT CCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGCATTCAATGAC CCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCGTGGCTCAGAT GGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCAATGAGGGCTG CTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAATGAAAGATCC TTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGAGAAGGGGTTC ATAGTGTGCATGGTCTCTAAGGTCGGGCAAGTGAAGGAAAAGATCTCCAA GGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTACTCTGGACCTG AAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGACGATGAAGCT CACGTTTAAGCTCTGCCGGCTTGGATTCTCTCGGGACTTGGTCATTCAAG CTTATTTCGCTTGCGATAAGAATGAAGAGCTCGCAGCTAACTATCTGTTT GAGAACCCCGACGATCCCGAAGATATGTGAGGTATTCCGGAAAACATCCA ACAGGAACAGCAGCAGCAAGCCGCCGCCGCTAGCGCACCCCAGTCTGCTG CTCCCGAAAGCGCCCCGTCCGCTGGTGACGACGAACCGGTCAACCTGTTC GAAGCTGCTGCTCAGGCTGGTGGCCAGGAGGGAGGAGGCCGAGGAGCTCG TGCTGCCGGTGGTGCTGAACTCCCGAGCCTCGAATTTCTGCGGAATAACC CCCACTTCCAGCAGCTTCGTCAGTTGGTCCAACAACAACCACAAATGCTC GAACCCATCCTCCAACAAGTCGCCGCTGGAAACCCCCAAATTGCGCAGCT CATTGGCCAAAATGAGGAACAGTTCCTACAGCTCCTGAGTGAGGAGCCTG ATGATGATGAGGCGCTCCCCCCTGGTACGACTCAAATTCATGTTACGGAA GAAGAGAGAGATGCCATTGAACGTCCCAAGGCTACTTCCTCCGGCACCTC GTCACAAGCGCCCTCCACCCCATCCAGAGCCGTCACCTCTACCCCTGCTG CGCCTCCCGCCCCAGCCCCTTCTGCGGCTTCCACTACACCGGCTGTTCCT TCGACTCCCTCCCCGGCCGCCGCGGGGACCTCCCAGGCACAGGGCTCCGC ATTCAATGACCCCTCCGCATTGCTGAGTGGCACTCAGAGCGAGGCTGTCG TGGCTCAGATGGAGGCAATGGGTTTCGCCCGGAGTGATGTAAACCGTGCA ATGAGGGCTGCTTTCTTTAACCCCGATCGTGCCATCGAATACCTTTTGAA TGAAAGATCCTTCAGGATGACAAGACGATCGAGTCATACAACATCGAGGA GAAGGGGTTCATAGTGTGCATGGTCTCTAAGGTCGGGCAAGTGAAGGAAA AGATCTCCAAGGAGAAGGGATGGGAGGTTCCTCAGCTTAAGCTCATCTAC TCTGGACCTGAAACAACAAAAGTTTGTAATCGATGCAGAGCCCTCAGAGA CGATGAAGCTCACGTTTAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0003684 | damaged DNA binding |
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
| GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process |
| GO:0006289 | nucleotide-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
| Note | BUSCO:EOG09264CST |
| DBxref | InterPro:IPR009060 |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR036353 |
| DBxref | InterPro:IPR015360 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR006636 |
| DBxref | InterPro:IPR015940 |
| DBxref | InterPro:IPR004806 |
| DBxref | PFAM:PF09280 |
| DBxref | PFAM:PF00240 |
| DBxref | PFAM:PF00627 |
| DBxref | PFAM:PF11976 |
| Product | UV excision repair protein Rad23 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| NKJJ01000012.1 | supercontig | NKJJ01000012.1:751527..753069 - |
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