You are here

Home

CAN33_9180-T1, CAN33_9180-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9180-T1
Unique NameCAN33_9180-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:867477..868823-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9180-T1 ID=CAN33_9180-T1|Name=CAN33_9180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1347bp|location=Sequence derived from alignment at NKJJ01000012.1:867477..868823- (Aspergillus niger FDAARGOS_311)
ATGGACCAGTTTTGGGCTGCTCCTCCTGTTACTAGGTACGCCACATCACT
CGTGTTTGATATCAGGACCCATAACTGACTCTCTTTTAGAACACTCACTG
CACTTACCTTTCTACAGTCTATACTGGTACATGGTGGCCTTCTCAGCGGT
TACTATGTACTGTTCCTTCGTCGCCTTGTCTTCAAGACTCTACCAGAGAT
ATGGAGGCTGTTCTCGCCGTTTATGATCACTGGACCAGGCCTTTCCCTGA
TCTTTGATCTCTACTTTAGTATGGCTTTTGCGCTGTTCCGATGAACGGGC
GTGCTAACTGCCGGTAGTGTTTACCTATGGCAGTCGCCTGGAGACTGAAT
CTCCCCGGTTCAGTGCACCCGGTGATTTTTTCACTTATGTGTCCTTCGTA
GCCTCCATCATCATGGTAAGTTGTGGGAACATCCCAGTCTCATCTGCAAG
CGATGACTTCGACCCTCGTTGTCTCCCAATCTTGCTCTGCGCCTATCTTT
GTTATTGTTGTCATTTCTTTTTTTCATCTGTTTACTTGCCACCTCGTATA
TCTGCCCGCCCAGCGCAGCATCAGCTGAAGCGGTTCCTGGAAACGAGGGA
GATCGCCCCTGCATCCCGTATAGCTCCACAACTGATTTTTACCGGAGCTA
TATGCGTTGTGGGTATGGTGGGACGACCAGTGAGATAGCTAGTGTGATGA
ACCTGTTCACACTGGTGGTTATGGTGCCCTACATCTCTATAACTATATAT
CCTATTGATTTGTCACTATTTTCATAGACCCTTCCTGCTTTCCAATGTAG
CCTCCTTGAATTGCCAGTACTGACAGCCCAAAGCTCACGGCAGGTTGTCT
ATTGAATAGTGTAATTTTCACTTCTGGTGAGCTTGCCGTGGTACCAAAAT
TATGCTTGCCTATACTGATATTTTCTCGACTCAGCGTTGATCATGGCTTT
CGTTTACACGTATTCCCAAGACAACCGAGGGAGAAAGGCGAGCTTTTTCA
TCGTCCAAATACCCGTCGAGTTCTTGCCATGGGCAATGCTCACATTAACG
CTGGTCGTTTCCGGATGGCCTGCGGCGTTAAGGGACGGCATGGGCATAGT
AGCTGCCCACTTCTACGATTTTCTTACCCGTATTTATCCAACTTTCGGAG
GTGGTAAGAATTACCTCGTCACTCCAGAATTTGTGAGGCGGTTCTTTGCT
GCTCGCAAGCCGCGGAGCGAACCTCGCGCCTTTGGGACCGCCTACCGTGC
GACGGACCAGGCCCAGGGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCAGA
GCCCTTGGAGCAGAAGAGGGCCAGGAAGAAGACTTGGTGGTGACTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000012.1:867477..868823-

>CAN33_9180-T1 ID=CAN33_9180-T1|Name=CAN33_9180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3840bp|location=Sequence derived from alignment at NKJJ01000012.1:867477..868823- (Aspergillus niger FDAARGOS_311)
CGTTGATCATGGCTTTCGTTTACACGTATTCCCAAGACAACCGAGGGAGA
AAGGCGAGCTTTTTCATCGTCCAAATACCCGTCGAGTTCTTGCCATGGGC
AATGCTCACATTAACGCTGGTCGTTTCCGGATGGCCTGCGGCGTTAAGGG
ACGGCATGGGCATAGTAGCTGCCCACTTCTACGATTTTCTTACCCGTATT
TATCCAACTTTCGGAGGTGGTAAGAATTACCTCGTCACTCCAGAATTTGT
GAGGCGGTTCTTTGCTGCTCGCAAGCCGCGGAGCGAACCTCGCGCCTTTG
GGACCGCCTACCGTGCGACGGACCAGGCCCAGGGTTCTTCGGGAAGTTGG
GCTTCGTCTTTTCAGAGCCCTTGGAGCAGAAGAGGGCCAGGAAGAAGACT
TGGTGGTGACTGACTCACGGCAGGTTGTCTATTGAATAGTGTAATTTTCA
CTTCTGTGTTTACCTATGGCAGTCGCCTGGAGACTGAATCTCCCCGGTTC
AGTGCACCCGGTGATTTTTTCACTTATGTGTCCTTCGTAGCCTCCATCAT
CATGAACACTCACTGCACTTACCTTTCTACAGTCTATACTGGTACATGGT
GGCCTTCTCAGCGGTTACTATGTACTGTTCCTTCGTCGCCTTGTCTTCAA
GACTCTACCAGAGATATGGAGGCTGTTCTCGCCGTTTATGATCACTGGAC
CAGGCCTTTCCCTGATCTTTGATCTCTACTTTAATGGACCAGTTTTGGGC
TGCTCCTCCTGTTACTAGCGTTGATCATGGCTTTCGTTTACACGTATTCC
CAAGACAACCGAGGGAGAAAGGCGAGCTTTTTCATCGTCCAAATACCCGT
CGAGTTCTTGCCATGGGCAATGCTCACATTAACGCTGGTCGTTTCCGGAT
GGCCTGCGGCGTTAAGGGACGGCATGGGCATAGTAGCTGCCCACTTCTAC
GATTTTCTTACCCGTATTTATCCAACTTTCGGAGGTGGTAAGAATTACCT
CGTCACTCCAGAATTTGTGAGGCGGTTCTTTGCTGCTCGCAAGCCGCGGA
GCGAACCTCGCGCCTTTGGGACCGCCTACCGTGCGACGGACCAGGCCCAG
GGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCAGAGCCCTTGGAGCAGAAG
AGGGCCAGGAAGAAGACTTGGTGGTGACTGACTCACGGCAGGTTGTCTAT
TGAATAGTGTAATTTTCACTTCTGTGTTTACCTATGGCAGTCGCCTGGAG
ACTGAATCTCCCCGGTTCAGTGCACCCGGTGATTTTTTCACTTATGTGTC
CTTCGTAGCCTCCATCATCATGAACACTCACTGCACTTACCTTTCTACAG
TCTATACTGGTACATGGTGGCCTTCTCAGCGGTTACTATGTACTGTTCCT
TCGTCGCCTTGTCTTCAAGACTCTACCAGAGATATGGAGGCTGTTCTCGC
CGTTTATGATCACTGGACCAGGCCTTTCCCTGATCTTTGATCTCTACTTT
AATGGACCAGTTTTGGGCTGCTCCTCCTGTTACTAGCGTTGATCATGGCT
TTCGTTTACACGTATTCCCAAGACAACCGAGGGAGAAAGGCGAGCTTTTT
CATCGTCCAAATACCCGTCGAGTTCTTGCCATGGGCAATGCTCACATTAA
CGCTGGTCGTTTCCGGATGGCCTGCGGCGTTAAGGGACGGCATGGGCATA
GTAGCTGCCCACTTCTACGATTTTCTTACCCGTATTTATCCAACTTTCGG
AGGTGGTAAGAATTACCTCGTCACTCCAGAATTTGTGAGGCGGTTCTTTG
CTGCTCGCAAGCCGCGGAGCGAACCTCGCGCCTTTGGGACCGCCTACCGT
GCGACGGACCAGGCCCAGGGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCA
GAGCCCTTGGAGCAGAAGAGGGCCAGGAAGAAGACTTGGTGGTGACTGAC
TCACGGCAGGTTGTCTATTGAATAGTGTAATTTTCACTTCTGTGTTTACC
TATGGCAGTCGCCTGGAGACTGAATCTCCCCGGTTCAGTGCACCCGGTGA
TTTTTTCACTTATGTGTCCTTCGTAGCCTCCATCATCATGAACACTCACT
GCACTTACCTTTCTACAGTCTATACTGGTACATGGTGGCCTTCTCAGCGG
TTACTATGTACTGTTCCTTCGTCGCCTTGTCTTCAAGACTCTACCAGAGA
TATGGAGGCTGTTCTCGCCGTTTATGATCACTGGACCAGGCCTTTCCCTG
ATCTTTGATCTCTACTTTAATGGACCAGTTTTGGGCTGCTCCTCCTGTTA
CTAGCGTTGATCATGGCTTTCGTTTACACGTATTCCCAAGACAACCGAGG
GAGAAAGGCGAGCTTTTTCATCGTCCAAATACCCGTCGAGTTCTTGCCAT
GGGCAATGCTCACATTAACGCTGGTCGTTTCCGGATGGCCTGCGGCGTTA
AGGGACGGCATGGGCATAGTAGCTGCCCACTTCTACGATTTTCTTACCCG
TATTTATCCAACTTTCGGAGGTGGTAAGAATTACCTCGTCACTCCAGAAT
TTGTGAGGCGGTTCTTTGCTGCTCGCAAGCCGCGGAGCGAACCTCGCGCC
TTTGGGACCGCCTACCGTGCGACGGACCAGGCCCAGGGTTCTTCGGGAAG
TTGGGCTTCGTCTTTTCAGAGCCCTTGGAGCAGAAGAGGGCCAGGAAGAA
GACTTGGTGGTGACTGACTCACGGCAGGTTGTCTATTGAATAGTGTAATT
TTCACTTCTGTGTTTACCTATGGCAGTCGCCTGGAGACTGAATCTCCCCG
GTTCAGTGCACCCGGTGATTTTTTCACTTATGTGTCCTTCGTAGCCTCCA
TCATCATGAACACTCACTGCACTTACCTTTCTACAGTCTATACTGGTACA
TGGTGGCCTTCTCAGCGGTTACTATGTACTGTTCCTTCGTCGCCTTGTCT
TCAAGACTCTACCAGAGATATGGAGGCTGTTCTCGCCGTTTATGATCACT
GGACCAGGCCTTTCCCTGATCTTTGATCTCTACTTTAATGGACCAGTTTT
GGGCTGCTCCTCCTGTTACTAGCGTTGATCATGGCTTTCGTTTACACGTA
TTCCCAAGACAACCGAGGGAGAAAGGCGAGCTTTTTCATCGTCCAAATAC
CCGTCGAGTTCTTGCCATGGGCAATGCTCACATTAACGCTGGTCGTTTCC
GGATGGCCTGCGGCGTTAAGGGACGGCATGGGCATAGTAGCTGCCCACTT
CTACGATTTTCTTACCCGTATTTATCCAACTTTCGGAGGTGGTAAGAATT
ACCTCGTCACTCCAGAATTTGTGAGGCGGTTCTTTGCTGCTCGCAAGCCG
CGGAGCGAACCTCGCGCCTTTGGGACCGCCTACCGTGCGACGGACCAGGC
CCAGGGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCAGAGCCCTTGGAGCA
GAAGAGGGCCAGGAAGAAGACTTGGTGGTGACTGACTCACGGCAGGTTGT
CTATTGAATAGTGTAATTTTCACTTCTGTGTTTACCTATGGCAGTCGCCT
GGAGACTGAATCTCCCCGGTTCAGTGCACCCGGTGATTTTTTCACTTATG
TGTCCTTCGTAGCCTCCATCATCATGAACACTCACTGCACTTACCTTTCT
ACAGTCTATACTGGTACATGGTGGCCTTCTCAGCGGTTACTATGTACTGT
TCCTTCGTCGCCTTGTCTTCAAGACTCTACCAGAGATATGGAGGCTGTTC
TCGCCGTTTATGATCACTGGACCAGGCCTTTCCCTGATCTTTGATCTCTA
CTTTAATGGACCAGTTTTGGGCTGCTCCTCCTGTTACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_9180CAN33_9180Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9180-T1CAN33_9180-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9180-T1.cdsCAN33_9180-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9180-T1.exon5CAN33_9180-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_9180-T1.exon4CAN33_9180-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_9180-T1.exon3CAN33_9180-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_9180-T1.exon2CAN33_9180-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_9180-T1.exon1CAN33_9180-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR007599
DBxrefPFAM:PF04511
ProductDer1-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:867477..868823 -
Powered by Drupal