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CAN33_9295-T1, CAN33_9295-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9295-T1
Unique NameCAN33_9295-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000012.1:925884..926964+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9295-T1 ID=CAN33_9295-T1|Name=CAN33_9295-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1081bp|location=Sequence derived from alignment at NKJJ01000012.1:925884..926964+ (Aspergillus niger FDAARGOS_311)
ATGGCCGTTGGAAAGTACGTGAATGCCCTACTCTATTATGATTTATGTTG
CAGCAATTCGATTGTAGTAGTCTCTTACTGATTTTATGGCAGGAACAAGC
GCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTC
ACCCGGAAAGACGAGTACTCTGTGAAGGTAAGTGTGCAACTTGAAGGTGT
GTGGATTTTGCTGACAGGAATAGGCTCCCTCGACCTTCCAGACCAGAGAG
TATGGCATCGCCCCTCCCCCCCAAATTTCGTCGTCGGGACTTTCAGATAT
TCTTTCGCCTCGTTATAATTATTTTTTGTCGCATTCCCCATGTGCAAACC
AGTCACTGACCAGTTCTTGTTGAAGTGTTGGAAAGACTCTGGTGAACCGT
ACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGA
AGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGG
TCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTC
CACGGTCTGGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTG
GCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATC
TTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATC
AAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAA
GATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGC
TTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCT
ACCCAGGGAATTTACCCCCTGCAGAACGTTCGTCCCCTCGACCCTCGTAT
TCTATCAAATGATTGCGATCCATCTAATACTCTATTAGGTCCACATTCGC
AAGGTCAAGCTTCTTAAGTCCCCAAGTTCGACCTCGGTGCCCTCCTTAAC
TTGCACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAGAGAGA
GTTCAAGGAACAGGTTCTTGAGAGCGTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000012.1:925884..926964+

>CAN33_9295-T1 ID=CAN33_9295-T1|Name=CAN33_9295-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3795bp|location=Sequence derived from alignment at NKJJ01000012.1:925884..926964+ (Aspergillus niger FDAARGOS_311)
ATGGCCGTTGGAAAGAACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAA
GAAGAGAACTGTCGACCCTTTCACCCGGAAAGACGAGTACTCTGTGAAGG
CTCCCTCGACCTTCCAGACCAGAGATGTTGGAAAGACTCTGGTGAACCGT
ACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGA
AGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGG
TCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCCTGACCAACTTC
CACGGTCTGGATTTCACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTG
GCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACGACCGATGACTATC
TTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCCCCAACCAAATC
AAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAA
GATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGC
TTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCT
ACCCAGGGAATTTACCCCCTGCAGAACGTTCGTCCCCTCGACCCTCTCCC
CAAGTTCGACCTCGGTGCCCTCCTTAACTTGCACGGCGAGTCTACAACCG
ATGATAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAACAGGTTCTTGAG
AGCGTGTAAATGGCCGTTGGAAAGAACAAGCGCTTGTCGAAGGGCAAGAA
GGGTGTTAAGAAGAGAACTGTCGACCCTTTCACCCGGAAAGACGAGTACT
CTGTGAAGGCTCCCTCGACCTTCCAGACCAGAGATGTTGGAAAGACTCTG
GTGAACCGTACCAGTGGTCTGAAGAACGCGAACGATTCCCTGAAGGGCCG
TATCTTCGAAGTCTCCCTTGCCGACTTGCAGAATGACGAGGACCATGCCT
TCCGTAAGGTCAAGCTCCGCGTGGACGAAATCCAGGGAAAGAACTGCCTG
ACCAACTTCCACGGTCTGGATTTCACGACCGACAAGCTGCGATCCCTTGT
GCGCAAGTGGCAGTCGCTGATTGAAGCCAACGTCACTGTGAAGACGACCG
ATGACTATCTTCTCCGTCTGTTCGCCATCGCCTTCACGAAGAGACGCCCC
AACCAAATCAAGAAGACTACATATGCTCGCTCGTCCCAAATCCGCGCTAT
TCGCAAGAAGATGACCGAGATCATGCAGCGCGAGGCCGCTAGCTGCTCTC
TCGCTCAGCTTACTACCAAGTTGATCCCCGAAGTCATCGGTCGTGAGATT
GAGAAGGCTACCCAGGGAATTTACCCCCTGCAGAACGTTCGTCCCCTCGA
CCCTCTCCCCAAGTTCGACCTCGGTGCCCTCCTTAACTTGCACGGCGAGT
CTACAACCGATGATAAGGGACACAAGGTTGAGAGAGAGTTCAAGGAACAG
GTTCTTGAGAGCGTGTAAATGGCCGTTGGAAAGAACAAGCGCTTGTCGAA
GGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTCACCCGGAAAG
ACGAGTACTCTGTGAAGGCTCCCTCGACCTTCCAGACCAGAGATGTTGGA
AAGACTCTGGTGAACCGTACCAGTGGTCTGAAGAACGCGAACGATTCCCT
GAAGGGCCGTATCTTCGAAGTCTCCCTTGCCGACTTGCAGAATGACGAGG
ACCATGCCTTCCGTAAGGTCAAGCTCCGCGTGGACGAAATCCAGGGAAAG
AACTGCCTGACCAACTTCCACGGTCTGGATTTCACGACCGACAAGCTGCG
ATCCCTTGTGCGCAAGTGGCAGTCGCTGATTGAAGCCAACGTCACTGTGA
AGACGACCGATGACTATCTTCTCCGTCTGTTCGCCATCGCCTTCACGAAG
AGACGCCCCAACCAAATCAAGAAGACTACATATGCTCGCTCGTCCCAAAT
CCGCGCTATTCGCAAGAAGATGACCGAGATCATGCAGCGCGAGGCCGCTA
GCTGCTCTCTCGCTCAGCTTACTACCAAGTTGATCCCCGAAGTCATCGGT
CGTGAGATTGAGAAGGCTACCCAGGGAATTTACCCCCTGCAGAACGTTCG
TCCCCTCGACCCTCTCCCCAAGTTCGACCTCGGTGCCCTCCTTAACTTGC
ACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAGAGAGAGTTC
AAGGAACAGGTTCTTGAGAGCGTGTAAATGGCCGTTGGAAAGAACAAGCG
CTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCGACCCTTTCA
CCCGGAAAGACGAGTACTCTGTGAAGGCTCCCTCGACCTTCCAGACCAGA
GATGTTGGAAAGACTCTGGTGAACCGTACCAGTGGTCTGAAGAACGCGAA
CGATTCCCTGAAGGGCCGTATCTTCGAAGTCTCCCTTGCCGACTTGCAGA
ATGACGAGGACCATGCCTTCCGTAAGGTCAAGCTCCGCGTGGACGAAATC
CAGGGAAAGAACTGCCTGACCAACTTCCACGGTCTGGATTTCACGACCGA
CAAGCTGCGATCCCTTGTGCGCAAGTGGCAGTCGCTGATTGAAGCCAACG
TCACTGTGAAGACGACCGATGACTATCTTCTCCGTCTGTTCGCCATCGCC
TTCACGAAGAGACGCCCCAACCAAATCAAGAAGACTACATATGCTCGCTC
GTCCCAAATCCGCGCTATTCGCAAGAAGATGACCGAGATCATGCAGCGCG
AGGCCGCTAGCTGCTCTCTCGCTCAGCTTACTACCAAGTTGATCCCCGAA
GTCATCGGTCGTGAGATTGAGAAGGCTACCCAGGGAATTTACCCCCTGCA
GAACGTTCGTCCCCTCGACCCTCTCCCCAAGTTCGACCTCGGTGCCCTCC
TTAACTTGCACGGCGAGTCTACAACCGATGATAAGGGACACAAGGTTGAG
AGAGAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAAATGGCCGTTGGAAA
GAACAAGCGCTTGTCGAAGGGCAAGAAGGGTGTTAAGAAGAGAACTGTCG
ACCCTTTCACCCGGAAAGACGAGTACTCTGTGAAGGCTCCCTCGACCTTC
CAGACCAGAGATGTTGGAAAGACTCTGGTGAACCGTACCAGTGGTCTGAA
GAACGCGAACGATTCCCTGAAGGGCCGTATCTTCGAAGTCTCCCTTGCCG
ACTTGCAGAATGACGAGGACCATGCCTTCCGTAAGGTCAAGCTCCGCGTG
GACGAAATCCAGGGAAAGAACTGCCTGACCAACTTCCACGGTCTGGATTT
CACGACCGACAAGCTGCGATCCCTTGTGCGCAAGTGGCAGTCGCTGATTG
AAGCCAACGTCACTGTGAAGACGACCGATGACTATCTTCTCCGTCTGTTC
GCCATCGCCTTCACGAAGAGACGCCCCAACCAAATCAAGAAGACTACATA
TGCTCGCTCGTCCCAAATCCGCGCTATTCGCAAGAAGATGACCGAGATCA
TGCAGCGCGAGGCCGCTAGCTGCTCTCTCGCTCAGCTTACTACCAAGTTG
ATCCCCGAAGTCATCGGTCGTGAGATTGAGAAGGCTACCCAGGGAATTTA
CCCCCTGCAGAACGTTCGTCCCCTCGACCCTCTCCCCAAGTTCGACCTCG
GTGCCCTCCTTAACTTGCACGGCGAGTCTACAACCGATGATAAGGGACAC
AAGGTTGAGAGAGAGTTCAAGGAACAGGTTCTTGAGAGCGTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS1CAN33_9295Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9295-T1CAN33_9295-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9295-T1.exon1CAN33_9295-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_9295-T1.exon2CAN33_9295-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_9295-T1.exon3CAN33_9295-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_9295-T1.exon4CAN33_9295-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_9295-T1.exon5CAN33_9295-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9295-T1.cdsCAN33_9295-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR027500
DBxrefInterPro:IPR018281
DBxrefInterPro:IPR001593
DBxrefPFAM:PF01015
Productribosomal 40S subunit protein S1B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000012.1supercontigNKJJ01000012.1:925884..926964 +
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