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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:19754..21107- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_9315-T1 ID=CAN33_9315-T1|Name=CAN33_9315-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1354bp|location=Sequence derived from alignment at NKJJ01000006.1:19754..21107- (Aspergillus niger FDAARGOS_311)
ATGGCAGCTCAAAAGGCCGTTTTCACCGTCTCGGCTCAGGCCACTCAGCT
AGGCAATCGCATCTCGGTGCACATGCTGGACTACCTCAGCACCGAGCACG
ACTTGCCGAACGGCTTTCGCGAACTGTCACAGACTTTCTTAGACACTTGC
CGCGCTTTATGGGCCATTGATGCTGGTCTCACCGAATCCACTGCTGCCGG
TCGCTCCCTGCCCGATGTGATCGTGGAGGAGGTGGCGAAAAAGTTCATGG
CCGCTTATCGTGATTTTCAAAGTCTGGACAAGGTCGTGACTAAACTCATC
CAGTATGAACATCGTGGCGCCCTTGGCAGGCTTCAACGTGGATGGAATCG
CCCCAGCCTCGAACTGCACCGCATTCGCGAGTCGTTGAAAAAGACAACCG
AAACACTTCAAATCAGCGTCCTCGCCTTTCACTGGTCCCTTGGGGAACAG
CCGTTTATGGCGGAATCAGTGGGCATCGGCTACGCCGGGTTGGCTGCCGC
ACTGGACCGCATGGCCAAAGGCCGGTCGGTAATGGGCATCAATAAGGCTA
AATCTCTGGAACAGGTATCGAAGGAGGTGGCTACTTCGTTGTCATCAGCG
TCAGTCCCCTCTGTGCCCCCCAAAGAATCCCCAGAACAACTCTCGGTTGG
GATAGAAAATCACCCGTCCAATACCGATGACATACTCTCCTCTGTGCTTT
CTCTTGACTCCCTCCTTATTACGAACGACAATGGCCAGGACGGTCTTTCT
TTCCCCCCAGTCAACTCTCGTCCTCAGCCTCTGCGACCAAATGGAAATCC
TGTGCGAACGAGCTCGCGCGAGCCGCAAGCGGAATCTGCTACACCTCTCG
ACCACAATATATCTGGGGATACCCTCACACATCGCCAGCTATATGAGTCC
TCAGCCCAACCCCTGCATCGCACCCCTAGCCGAAATAGTGGAGCTAGTGC
GACGCGATTGCGCGGTGCGTTAGCCTCCGCCGTCCGGGGACGGAACCACA
AGTTGCTAGAGCAGTTGCTGGACAGTGGAGTGTCGCCCAATCTTGGGGAG
CATATCCATCCGCTCAACGAGGCCGTGCACCAGCACGATTTCCAGGGCAT
GCGCCTACTTCTGCAGTTTGGTGCGAACCCAAACGAACCAGACCGGCAGG
GAGAGACGCCCTTGTTTGTCGCAGTGGATGAGTCATTTATCGACGGGGCG
AACTTATTGCTAAAGTATCGCGCCAACCCCAACTATGCATCAGAGCCGGG
ACGAGACTCTCCCTTGAGTCGTGCACTGGCAAAGGGCAAGCTCAATATGG
TGCAGCAGCTGCTTGCGCATGGGGCAATGCAGATACTGAAACCCCAAGCG
GTAG back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:19754..21107- >CAN33_9315-T1 ID=CAN33_9315-T1|Name=CAN33_9315-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2610bp|location=Sequence derived from alignment at NKJJ01000006.1:19754..21107- (Aspergillus niger FDAARGOS_311)
CGGTAGATGGCAGCTCAAAAGGCCGTTTTCACCGTCTCGGCTCAGGCCAC
TCAGCTAGGCAATCGCATCTCGGTGCACATGCTGGACTACCTCAGCACCG
AGCACGACTTGCCGAACGGCTTTCGCGAACTGTCACAGACTTTCTTAGAC
ACTTGCCGCGCTTTATGGGCCATTGATGCTGGTCTCACCGAATCCACTGC
TGCCGGTCGCTCCCTGCCCGATGTGATCGTGGAGGAGGTGGCGAAAAAGT
TCATGGCCGCTTATCGTGATTTTCAAAGTCTGGACAAGGTCGTGACTAAA
CTCATCCAGTATGAACATCGTGGCGCCCTTGGCAGGCTTCAACGTGGATG
GAATCGCCCCAGCCTCGAACTGCACCGCATTCGCGAGTCGTTGAAAAAGA
CAACCGAAACACTTCAAATCAGCGTCCTCGCCTTTCACTGGTCCCTTGGG
GAACAGCCGTTTATGGCGGAATCAGTGGGCATCGGCTACGCCGGGTTGGC
TGCCGCACTGGACCGCATGGCCAAAGGCCGGTCGGTAATGGGCATCAATA
AGGCTAAATCTCTGGAACAGGTATCGAAGGAGGTGGCTACTTCGTTGTCA
TCAGCGTCAGTCCCCTCTGTGCCCCCCAAAGAATCCCCAGAACAACTCTC
GGTTGGGATAGAAAATCACCCGTCCAATACCGATGACATACTCTCCTCTG
TGCTTTCTCTTGACTCCCTCCTTATTACGAACGACAATGGCCAGGACGGT
CTTTCTTTCCCCCCAGTCAACTCTCGTCCTCAGCCTCTGCGACCAAATGG
AAATCCTGTGCGAACGAGCTCGCGCGAGCCGCAAGCGGAATCTGCTACAC
CTCTCGACCACAATATATCTGGGGATACCCTCACACATCGCCAGCTATAT
GAGTCCTCAGCCCAACCCCTGCATCGCACCCCTAGCCGAAATAGTGGAGC
TAGTGCGACGCGATTGCGCGGTGCGTTAGCCTCCGCCGTCCGGGGACGGA
ACCACAAGTTGCTAGAGCAGTTGCTGGACAGTGGAGTGTCGCCCAATCTT
GGGGAGCATATCCATCCGCTCAACGAGGCCGTGCACCAGCACGATTTCCA
GGGCATGCGCCTACTTCTGCAGTTTGGTGCGAACCCAAACGAACCAGACC
GGCAGGGAGAGACGCCCTTGTTTGTCGCAGTGGATGAGTCATTTATCGAC
GGGGCGAACTTATTGCTAAAGTATCGCGCCAACCCCAACTATGCATCAGA
GCCGGGACGAGACTCTCCCTTGAGTCGTGCACTGGCAAAGGGCAAGCTCA
ATATGCGGTAGATGGCAGCTCAAAAGGCCGTTTTCACCGTCTCGGCTCAG
GCCACTCAGCTAGGCAATCGCATCTCGGTGCACATGCTGGACTACCTCAG
CACCGAGCACGACTTGCCGAACGGCTTTCGCGAACTGTCACAGACTTTCT
TAGACACTTGCCGCGCTTTATGGGCCATTGATGCTGGTCTCACCGAATCC
ACTGCTGCCGGTCGCTCCCTGCCCGATGTGATCGTGGAGGAGGTGGCGAA
AAAGTTCATGGCCGCTTATCGTGATTTTCAAAGTCTGGACAAGGTCGTGA
CTAAACTCATCCAGTATGAACATCGTGGCGCCCTTGGCAGGCTTCAACGT
GGATGGAATCGCCCCAGCCTCGAACTGCACCGCATTCGCGAGTCGTTGAA
AAAGACAACCGAAACACTTCAAATCAGCGTCCTCGCCTTTCACTGGTCCC
TTGGGGAACAGCCGTTTATGGCGGAATCAGTGGGCATCGGCTACGCCGGG
TTGGCTGCCGCACTGGACCGCATGGCCAAAGGCCGGTCGGTAATGGGCAT
CAATAAGGCTAAATCTCTGGAACAGGTATCGAAGGAGGTGGCTACTTCGT
TGTCATCAGCGTCAGTCCCCTCTGTGCCCCCCAAAGAATCCCCAGAACAA
CTCTCGGTTGGGATAGAAAATCACCCGTCCAATACCGATGACATACTCTC
CTCTGTGCTTTCTCTTGACTCCCTCCTTATTACGAACGACAATGGCCAGG
ACGGTCTTTCTTTCCCCCCAGTCAACTCTCGTCCTCAGCCTCTGCGACCA
AATGGAAATCCTGTGCGAACGAGCTCGCGCGAGCCGCAAGCGGAATCTGC
TACACCTCTCGACCACAATATATCTGGGGATACCCTCACACATCGCCAGC
TATATGAGTCCTCAGCCCAACCCCTGCATCGCACCCCTAGCCGAAATAGT
GGAGCTAGTGCGACGCGATTGCGCGGTGCGTTAGCCTCCGCCGTCCGGGG
ACGGAACCACAAGTTGCTAGAGCAGTTGCTGGACAGTGGAGTGTCGCCCA
ATCTTGGGGAGCATATCCATCCGCTCAACGAGGCCGTGCACCAGCACGAT
TTCCAGGGCATGCGCCTACTTCTGCAGTTTGGTGCGAACCCAAACGAACC
AGACCGGCAGGGAGAGACGCCCTTGTTTGTCGCAGTGGATGAGTCATTTA
TCGACGGGGCGAACTTATTGCTAAAGTATCGCGCCAACCCCAACTATGCA
TCAGAGCCGGGACGAGACTCTCCCTTGAGTCGTGCACTGGCAAAGGGCAA
GCTCAATATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF12796 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:19754..21107 - |
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