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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:35636..36324+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_9345-T1 ID=CAN33_9345-T1|Name=CAN33_9345-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=689bp|location=Sequence derived from alignment at NKJJ01000006.1:35636..36324+ (Aspergillus niger FDAARGOS_311)
ATGCTACTTCCTCGTCTCTGGCTGGCGTGCCTCACGCTGCTCGTGGCTGG
GGTCGCTGCCGTCAAGTTCAATCCCTTACCAGCTCCACGCAACATCAACT
GGGCTTCGTCGGGCCCTAAGCAGCTGGCCGGCTTCGTCAGTCTCCGTGCT
TCCCAGAACACGTCTGATTTTATTCTGGCCAATGGATGGGACCGTGCTTG
GGATTCTATCGTCTCCCTGCAATGGGTACCTGCAGCGACCGAAGGTCCCG
TGCCATCTTTTCAACCCTTCCCCACCGGTACGGCCGGGGTCGCTAGAAGG
TCCTCGCAGGCACTGCCATCGCTCCAGTTTGTCGATGTGGATGTGTTGGA
TTTGGCGCAGATCTCCAGCATGGGGTGGATGAGTCTTACACCCTCGAAGT
CACCGAAAGTGCTACCTCGGTGGTCATTGAGGCTCCCACCGTGTGGGGGG
CGCTCCATGCCTTTACCACTCTCCAGCAGCTGGTCATCTCCGACGGACAG
GGGGGCTTGTTGATCGAGCAGCCCGTTAAGATTCAGGATGCCCCGCTCTA
TCCCTACCGAGGGATTATGCTTGATAGTGGTCGAAACTTCATCTCGGTCA
ACAAGATTTACGAGCAGCTGGACGGCATGTCCTTTCAAAACTCAACGTTC
TACACTGGCACATGGAAGACACCTAATCGTGGCCCATAG back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:35636..36324+ >CAN33_9345-T1 ID=CAN33_9345-T1|Name=CAN33_9345-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1278bp|location=Sequence derived from alignment at NKJJ01000006.1:35636..36324+ (Aspergillus niger FDAARGOS_311)
ATGCTACTTCCTCGTCTCTGGCTGGCGTGCCTCACGCTGCTCGTGGCTGG
GGTCGCTGCCGTCAAGTTCAATCCCTTACCAGCTCCACGCAACATCAACT
GGGCTTCGTCGGGCCCTAAGCAGCTGGCCGGCTTCGTCAGTCTCCGTGCT
TCCCAGAACACGTCTGATTTTATTCTGGCCAATGGATGGGACCGTGCTTG
GGATTCTATCGTCTCCCTGCAATGGGTACCTGCAGCGACCGAAGGTCCCG
TGCCATCTTTTCAACCCTTCCCCACCGTTTGTCGATGTGGATGTGTTGGA
TTTGGCGCAGATCTCCAGCATGGGGTGGATGAGTCTTACACCCTCGAAGT
CACCGAAAGTGCTACCTCGGTGGTCATTGAGGCTCCCACCGTGTGGGGGG
CGCTCCATGCCTTTACCACTCTCCAGCAGCTGGTCATCTCCGACGGACAG
GGGGGCTTGTTGATCGAGCAGCCCGTTAAGATTCAGGATGCCCCGCTCTA
TCCCTACCGAGGGATTATGCTTGATAGTGGTCGAAACTTCATCTCGGTCA
ACAAGATTTACGAGCAGCTGGACGGCATGTCCTTTCAAAACTCAACGTTC
TACACTGGCACATGGAAGACACCTAATCGTGGCCCATAGATGCTACTTCC
TCGTCTCTGGCTGGCGTGCCTCACGCTGCTCGTGGCTGGGGTCGCTGCCG
TCAAGTTCAATCCCTTACCAGCTCCACGCAACATCAACTGGGCTTCGTCG
GGCCCTAAGCAGCTGGCCGGCTTCGTCAGTCTCCGTGCTTCCCAGAACAC
GTCTGATTTTATTCTGGCCAATGGATGGGACCGTGCTTGGGATTCTATCG
TCTCCCTGCAATGGGTACCTGCAGCGACCGAAGGTCCCGTGCCATCTTTT
CAACCCTTCCCCACCGTTTGTCGATGTGGATGTGTTGGATTTGGCGCAGA
TCTCCAGCATGGGGTGGATGAGTCTTACACCCTCGAAGTCACCGAAAGTG
CTACCTCGGTGGTCATTGAGGCTCCCACCGTGTGGGGGGCGCTCCATGCC
TTTACCACTCTCCAGCAGCTGGTCATCTCCGACGGACAGGGGGGCTTGTT
GATCGAGCAGCCCGTTAAGATTCAGGATGCCCCGCTCTATCCCTACCGAG
GGATTATGCTTGATAGTGGTCGAAACTTCATCTCGGTCAACAAGATTTAC
GAGCAGCTGGACGGCATGTCCTTTCAAAACTCAACGTTCTACACTGGCAC
ATGGAAGACACCTAATCGTGGCCCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004563 | beta-N-acetylhexosaminidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR029019 |
| DBxref | InterPro:IPR015883 |
| DBxref | InterPro:IPR029018 |
| DBxref | InterPro:IPR025705 |
| DBxref | PFAM:PF14845 |
| Product | Glycosyl hydrolase family 20 domain 2 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:35636..36324 + |
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