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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:60117..61389+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_9395-T1 ID=CAN33_9395-T1|Name=CAN33_9395-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1273bp|location=Sequence derived from alignment at NKJJ01000006.1:60117..61389+ (Aspergillus niger FDAARGOS_311)
ATGGTTGTTGCAGGATCGAATCTGCGGGATGATGAGTGCAAGGGTCTATT
GACTTCAGTGACTTGCACTCCTGCAAGCCCACCACCACCACCATCGGACG
ATGTGAAGCTTGAGTTGGGATACTATTCGTACGAGGACGAAAAGAGACCT
GAAGTGTTGTCTGAGGAGCCGGAAAAGCAGATAGGGAGTGTTCGACTTCT
TGTATGGATGACAATCAATATTGTTGCGACTGTTGCCATCGTATGTTCCT
ATCATGCTGAACTTGAACATGAATAATAGTCACTGACAAACACGCAGGTA
TTCACCAACAAATCCATCCTCTCCAATGCATCTTTCCGCAACTCGCAAGT
ATCCTTCGCCGCCTATCATTTCACCATCACCGGGCTCACACTATGGCTGG
CATCGCGGCCATGCTGCGGCTGGTTCGAACCCAAGCACGTATCGCCCTAC
CGCATCCTCCACCTCGTCGCGGCTATGTGCATCCAGGTCATCTTTCAGAA
CCTGGCACTGGCTTATTCGTCGGTGATCTTTCACCAGCTGGCGCGGTTGC
TCCTTACGCCTGCTACGGCGTTGTTGAATTTTGCGCTGTTCCAGTCCAGC
ATCCCCAGAGCGGCGTTCCTTCCCCTGGTCCTACTGTGCACGGGAGTTGG
AATTGTCTCCTACTTTGATTCGCTCCCGTCCGCGAAAGGCAACGATACCA
CGACACCAGAGGGTATTTTCTTCGCTTTGTCTGGTGTGTGCGCTAGTGCA
CTGTACACGGTCCTGGTGGGCCGGTATCATAAGAAGCTGGAGATGAGCAG
TATGCAGCTTCTACTTAATCAGGCCCCTGTCAGTGCTGCTGTCCTATTGT
GTGTTGTTCCATGGATGGAGACGTTTCCGGAGGTTGCGGCTGTCCCTGGG
TCGTTGTGGACTTCGATACTTGCGGTAAGCTGACTTTTATGTGCTTTTTG
TCTGACAATCGATTAAGATAGAAAAGTGGCTGATGTATGCTTTGCAGAGT
GGAATATTCGCTTGTCTGGTGAACCTATCTCAGTTCTATATTATTGATGC
TGCCGGGCCGGTTACGAGCACGGTGATCGGACAGCTCAAGACCTGCGTCA
TTGTAGGGTTGGGATGGGTGCTGAGTGACCATGAGATTCTGCGGCAGAGT
GTCGCGGGTATTTTGATGGCTTTGACGGGGATGAGCTTGTGAGTTACCTT
GTCTTTATGGTTGATTCTGATATGACTGACGTTCTGTAGGTACATGAAGA
TAATTCTAAGGCATCAATCATGA back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:60117..61389+ >CAN33_9395-T1 ID=CAN33_9395-T1|Name=CAN33_9395-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4368bp|location=Sequence derived from alignment at NKJJ01000006.1:60117..61389+ (Aspergillus niger FDAARGOS_311)
ATGGTTGTTGCAGGATCGAATCTGCGGGATGATGAGTGCAAGGGTCTATT
GACTTCAGTGACTTGCACTCCTGCAAGCCCACCACCACCACCATCGGACG
ATGTGAAGCTTGAGTTGGGATACTATTCGTACGAGGACGAAAAGAGACCT
GAAGTGTTGTCTGAGGAGCCGGAAAAGCAGATAGGGAGTGTTCGACTTCT
TGTATGGATGACAATCAATATTGTTGCGACTGTTGCCATCGTATTCACCA
ACAAATCCATCCTCTCCAATGCATCTTTCCGCAACTCGCAAGTATCCTTC
GCCGCCTATCATTTCACCATCACCGGGCTCACACTATGGCTGGCATCGCG
GCCATGCTGCGGCTGGTTCGAACCCAAGCACGTATCGCCCTACCGCATCC
TCCACCTCGTCGCGGCTATGTGCATCCAGGTCATCTTTCAGAACCTGGCA
CTGGCTTATTCGTCGGTGATCTTTCACCAGCTGGCGCGGTTGCTCCTTAC
GCCTGCTACGGCGTTGTTGAATTTTGCGCTGTTCCAGTCCAGCATCCCCA
GAGCGGCGTTCCTTCCCCTGGTCCTACTGTGCACGGGAGTTGGAATTGTC
TCCTACTTTGATTCGCTCCCGTCCGCGAAAGGCAACGATACCACGACACC
AGAGGGTATTTTCTTCGCTTTGTCTGGTGTGTGCGCTAGTGCACTGTACA
CGGTCCTGGTGGGCCGGTATCATAAGAAGCTGGAGATGAGCAGTATGCAG
CTTCTACTTAATCAGGCCCCTGTCAGTGCTGCTGTCCTATTGTGTGTTGT
TCCATGGATGGAGACGTTTCCGGAGGTTGCGGCTGTCCCTGGGTCGTTGT
GGACTTCGATACTTGCGAGTGGAATATTCGCTTGTCTGGTGAACCTATCT
CAGTTCTATATTATTGATGCTGCCGGGCCGGTTACGAGCACGGTGATCGG
ACAGCTCAAGACCTGCGTCATTGTAGGGTTGGGATGGGTGCTGAGTGACC
ATGAGATTCTGCGGCAGAGTGTCGCGGGTATTTTGATGGCTTTGACGGGG
ATGAGCTTGTACATGAAGATAATTCTAAGGCATCAATCATGAATGGTTGT
TGCAGGATCGAATCTGCGGGATGATGAGTGCAAGGGTCTATTGACTTCAG
TGACTTGCACTCCTGCAAGCCCACCACCACCACCATCGGACGATGTGAAG
CTTGAGTTGGGATACTATTCGTACGAGGACGAAAAGAGACCTGAAGTGTT
GTCTGAGGAGCCGGAAAAGCAGATAGGGAGTGTTCGACTTCTTGTATGGA
TGACAATCAATATTGTTGCGACTGTTGCCATCGTATTCACCAACAAATCC
ATCCTCTCCAATGCATCTTTCCGCAACTCGCAAGTATCCTTCGCCGCCTA
TCATTTCACCATCACCGGGCTCACACTATGGCTGGCATCGCGGCCATGCT
GCGGCTGGTTCGAACCCAAGCACGTATCGCCCTACCGCATCCTCCACCTC
GTCGCGGCTATGTGCATCCAGGTCATCTTTCAGAACCTGGCACTGGCTTA
TTCGTCGGTGATCTTTCACCAGCTGGCGCGGTTGCTCCTTACGCCTGCTA
CGGCGTTGTTGAATTTTGCGCTGTTCCAGTCCAGCATCCCCAGAGCGGCG
TTCCTTCCCCTGGTCCTACTGTGCACGGGAGTTGGAATTGTCTCCTACTT
TGATTCGCTCCCGTCCGCGAAAGGCAACGATACCACGACACCAGAGGGTA
TTTTCTTCGCTTTGTCTGGTGTGTGCGCTAGTGCACTGTACACGGTCCTG
GTGGGCCGGTATCATAAGAAGCTGGAGATGAGCAGTATGCAGCTTCTACT
TAATCAGGCCCCTGTCAGTGCTGCTGTCCTATTGTGTGTTGTTCCATGGA
TGGAGACGTTTCCGGAGGTTGCGGCTGTCCCTGGGTCGTTGTGGACTTCG
ATACTTGCGAGTGGAATATTCGCTTGTCTGGTGAACCTATCTCAGTTCTA
TATTATTGATGCTGCCGGGCCGGTTACGAGCACGGTGATCGGACAGCTCA
AGACCTGCGTCATTGTAGGGTTGGGATGGGTGCTGAGTGACCATGAGATT
CTGCGGCAGAGTGTCGCGGGTATTTTGATGGCTTTGACGGGGATGAGCTT
GTACATGAAGATAATTCTAAGGCATCAATCATGAATGGTTGTTGCAGGAT
CGAATCTGCGGGATGATGAGTGCAAGGGTCTATTGACTTCAGTGACTTGC
ACTCCTGCAAGCCCACCACCACCACCATCGGACGATGTGAAGCTTGAGTT
GGGATACTATTCGTACGAGGACGAAAAGAGACCTGAAGTGTTGTCTGAGG
AGCCGGAAAAGCAGATAGGGAGTGTTCGACTTCTTGTATGGATGACAATC
AATATTGTTGCGACTGTTGCCATCGTATTCACCAACAAATCCATCCTCTC
CAATGCATCTTTCCGCAACTCGCAAGTATCCTTCGCCGCCTATCATTTCA
CCATCACCGGGCTCACACTATGGCTGGCATCGCGGCCATGCTGCGGCTGG
TTCGAACCCAAGCACGTATCGCCCTACCGCATCCTCCACCTCGTCGCGGC
TATGTGCATCCAGGTCATCTTTCAGAACCTGGCACTGGCTTATTCGTCGG
TGATCTTTCACCAGCTGGCGCGGTTGCTCCTTACGCCTGCTACGGCGTTG
TTGAATTTTGCGCTGTTCCAGTCCAGCATCCCCAGAGCGGCGTTCCTTCC
CCTGGTCCTACTGTGCACGGGAGTTGGAATTGTCTCCTACTTTGATTCGC
TCCCGTCCGCGAAAGGCAACGATACCACGACACCAGAGGGTATTTTCTTC
GCTTTGTCTGGTGTGTGCGCTAGTGCACTGTACACGGTCCTGGTGGGCCG
GTATCATAAGAAGCTGGAGATGAGCAGTATGCAGCTTCTACTTAATCAGG
CCCCTGTCAGTGCTGCTGTCCTATTGTGTGTTGTTCCATGGATGGAGACG
TTTCCGGAGGTTGCGGCTGTCCCTGGGTCGTTGTGGACTTCGATACTTGC
GAGTGGAATATTCGCTTGTCTGGTGAACCTATCTCAGTTCTATATTATTG
ATGCTGCCGGGCCGGTTACGAGCACGGTGATCGGACAGCTCAAGACCTGC
GTCATTGTAGGGTTGGGATGGGTGCTGAGTGACCATGAGATTCTGCGGCA
GAGTGTCGCGGGTATTTTGATGGCTTTGACGGGGATGAGCTTGTACATGA
AGATAATTCTAAGGCATCAATCATGAATGGTTGTTGCAGGATCGAATCTG
CGGGATGATGAGTGCAAGGGTCTATTGACTTCAGTGACTTGCACTCCTGC
AAGCCCACCACCACCACCATCGGACGATGTGAAGCTTGAGTTGGGATACT
ATTCGTACGAGGACGAAAAGAGACCTGAAGTGTTGTCTGAGGAGCCGGAA
AAGCAGATAGGGAGTGTTCGACTTCTTGTATGGATGACAATCAATATTGT
TGCGACTGTTGCCATCGTATTCACCAACAAATCCATCCTCTCCAATGCAT
CTTTCCGCAACTCGCAAGTATCCTTCGCCGCCTATCATTTCACCATCACC
GGGCTCACACTATGGCTGGCATCGCGGCCATGCTGCGGCTGGTTCGAACC
CAAGCACGTATCGCCCTACCGCATCCTCCACCTCGTCGCGGCTATGTGCA
TCCAGGTCATCTTTCAGAACCTGGCACTGGCTTATTCGTCGGTGATCTTT
CACCAGCTGGCGCGGTTGCTCCTTACGCCTGCTACGGCGTTGTTGAATTT
TGCGCTGTTCCAGTCCAGCATCCCCAGAGCGGCGTTCCTTCCCCTGGTCC
TACTGTGCACGGGAGTTGGAATTGTCTCCTACTTTGATTCGCTCCCGTCC
GCGAAAGGCAACGATACCACGACACCAGAGGGTATTTTCTTCGCTTTGTC
TGGTGTGTGCGCTAGTGCACTGTACACGGTCCTGGTGGGCCGGTATCATA
AGAAGCTGGAGATGAGCAGTATGCAGCTTCTACTTAATCAGGCCCCTGTC
AGTGCTGCTGTCCTATTGTGTGTTGTTCCATGGATGGAGACGTTTCCGGA
GGTTGCGGCTGTCCCTGGGTCGTTGTGGACTTCGATACTTGCGAGTGGAA
TATTCGCTTGTCTGGTGAACCTATCTCAGTTCTATATTATTGATGCTGCC
GGGCCGGTTACGAGCACGGTGATCGGACAGCTCAAGACCTGCGTCATTGT
AGGGTTGGGATGGGTGCTGAGTGACCATGAGATTCTGCGGCAGAGTGTCG
CGGGTATTTTGATGGCTTTGACGGGGATGAGCTTGTACATGAAGATAATT
CTAAGGCATCAATCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000620 |
| DBxref | PFAM:PF00892 |
| Product | Triose-phosphate Transporter family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:60117..61389 + |
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