You are here

Home

CAN33_9445-T1, CAN33_9445-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9445-T1
Unique NameCAN33_9445-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000006.1:87044..88684+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9445-T1 ID=CAN33_9445-T1|Name=CAN33_9445-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1641bp|location=Sequence derived from alignment at NKJJ01000006.1:87044..88684+ (Aspergillus niger FDAARGOS_311)
ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCC
CGAGGATTTCGAGGACAGTCAAACGGGATTGGAAATACCTTCGACCCCTT
CAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA
TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACT
GACATTGTCTCAACCATCGCAGCACAGTACACCAATGGATCATCCACCAA
AGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA
ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATC
TTCAGCTTCACTCGCTCTAGAACCAGAAAATAAGGACAAAGAGGGAGGGT
CTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT
ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCT
GGATGCCAACAAAGGGAAAGGAGACAGATCTGGTTTCTTTACACCGGAGG
AAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC
ATGTCGAGCGATACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAA
GTCAAACCCCTTCCCTTGTCCTACGGAAATCACCACAAAACCGGCTTTCT
GGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT
CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTG
GACTGCCGAACAAGATGACGAACTCATCTTACTTCATGAACGCCACGGGC
CCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG
ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGG
GCCTTGGTCTGAATGGGAAGTATCTGCACTACTAGAGCATCTACAGGCCT
GGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT
GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGA
CAACTGCCGTTCCAGGCAGCAGTGTGGAGACAAATTTCGCAAGATCAGGC
GCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC
CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGAT
TACGTCTTCTCAGAGCCAATCAAACAAGCACTTTAAAAGTTCTGAATACG
TGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT
TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTC
TTCGAAGTCGCTGAAATCTGCACCCAAGAACGTCAATCATTCAGTTCATT
CCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA
GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGA
TACCGGTAGTCTTCGTTCGGTACAACCGTCTGGCAAGAAGCAGTCTTCGG
GACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000006.1:87044..88684+

>CAN33_9445-T1 ID=CAN33_9445-T1|Name=CAN33_9445-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1641bp|location=Sequence derived from alignment at NKJJ01000006.1:87044..88684+ (Aspergillus niger FDAARGOS_311)
ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCC
CGAGGATTTCGAGGACAGTCAAACGGGATTGGAAATACCTTCGACCCCTT
CAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA
TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACT
GACATTGTCTCAACCATCGCAGCACAGTACACCAATGGATCATCCACCAA
AGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA
ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATC
TTCAGCTTCACTCGCTCTAGAACCAGAAAATAAGGACAAAGAGGGAGGGT
CTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT
ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCT
GGATGCCAACAAAGGGAAAGGAGACAGATCTGGTTTCTTTACACCGGAGG
AAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC
ATGTCGAGCGATACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAA
GTCAAACCCCTTCCCTTGTCCTACGGAAATCACCACAAAACCGGCTTTCT
GGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT
CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTG
GACTGCCGAACAAGATGACGAACTCATCTTACTTCATGAACGCCACGGGC
CCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG
ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGG
GCCTTGGTCTGAATGGGAAGTATCTGCACTACTAGAGCATCTACAGGCCT
GGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT
GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGA
CAACTGCCGTTCCAGGCAGCAGTGTGGAGACAAATTTCGCAAGATCAGGC
GCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC
CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGAT
TACGTCTTCTCAGAGCCAATCAAACAAGCACTTTAAAAGTTCTGAATACG
TGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT
TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTC
TTCGAAGTCGCTGAAATCTGCACCCAAGAACGTCAATCATTCAGTTCATT
CCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA
GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGA
TACCGGTAGTCTTCGTTCGGTACAACCGTCTGGCAAGAAGCAGTCTTCGG
GACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_9445CAN33_9445Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9445-T1.exon1CAN33_9445-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9445-T1.cdsCAN33_9445-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9445-T1CAN33_9445-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017930
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR001005
DBxrefPFAM:PF13921
DBxrefPFAM:PF00249
ProductMyb-like DNA-binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000006.1supercontigNKJJ01000006.1:87044..88684 +
Powered by Drupal