You are here

Home

CAN33_9470-T1, CAN33_9470-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9470-T1
Unique NameCAN33_9470-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000006.1:102480..104885+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9470-T1 ID=CAN33_9470-T1|Name=CAN33_9470-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2406bp|location=Sequence derived from alignment at NKJJ01000006.1:102480..104885+ (Aspergillus niger FDAARGOS_311)
ATGGATCACCGCGGTTCTTTCTTCTTCTTTCTGGTAGTTTTCTACCTGCT
TCTGAGCTCGCAGTCGCATTCGCCTCTGGTCTCCCAGGATGAAGAACACC
AAAGGGAGCTGGTGAGGGAGCGGAATGCGCTTCACATGTTGAACCAGTCT
CAGTATGGCGACTTCGATCCGATCACCGACAGATGGCTCCCGTTTTCCGG
TGTTAGGAAGAATGATAGCTATGCTTGGGATCTTCTTCCAGATGTTCAGG
ATAGAGCTCGGTCTCAATTGCGGTCCACCATGGCAGAGGCGGGCTTGAGG
CCTCCCAAGGCCCTTGCGGTGCCTGACGCTTTTTCCGGTCTTAACTTGAC
CCAATTACTCCTCCCAGTCTATCGTAATGCGACCGGTAAGCTGCGCGGGG
AATGGGTACGCCACAGACAGAACAAAGAACATGCCCTGTTGAACACGACT
GCAATTGCACTGGAGAACGAATACTTCACGCACGAGTTCAGTCACAATGT
TACGGGGGATAGTGGCACATTTTACCTTGATCTCCGGGAGGGCGGTGGTG
AGGAGGTTCAGTTGCCTGAAGGCCAGGTTCGGGAGATTCGAGCAACTTTG
GCTGTAGAGAGTGGCGATTTCTGGGGTAATACCTGGTATCTATCGCTGTT
CGGTGTTCATTTCCCGGAGACGGGTGCCATCATCTTGACTACAACCAGCG
AGAAATTTGGTGGCGTATTCACATTACCGCATCTGATGCTCTCGCCTGAC
GCATACAATCTCACCCACCAGCTTCTCGTCAAGTCCCTCTCGGACACTAT
ATCCGAGAAGCAGAATCGACCTCCTACCCTATTTCCTTGGTCCTCACTTG
TCGGGACGGAGCAGGTGGAATACCCGGCTCCAAAATGTGAACATATCGTC
TACCTCCAGCTGCACCCCGTCGCGATCCACGGCTACCTCACAGATAAAAC
GATCATCGAGCAGATAGAACAAGAGCTGAGATATCCAATGGGAGCCCCTA
TTCCGTCTCCACCACTGTTAGTCATGTCAGCTGTCGTCTTCTCGCCTGAT
TGTGGGTACATCCTGGAGACCAAGGGAGCTCCTGACTTCCCACCAACAGA
AGCACTCTATTTATCAGGACCGAAGATGGAGGAATTCGGCAAATTCTCTG
CTCGCATCATTTTTATGATCTCGGCCTTTTCTGTTGGCCAGATCGCATTA
CTCTTGCGCCAAATCAAAGAAGCATCCACGCCATCTACTAGAAGCCGGAT
CAGCTTCTACACGATCGCGCTCATGGCGTTCGGCGATTCTTTCGTACTTG
TCTTCATGCTGCTGGAGCTTTATCCGGCCGTTTCATTCCTTGTTATGACA
ACAGCATCCTTCTTGACCTTCCTCTCGGTCAGTTATATCGGAATGAAATT
TATGATGGAAATATGGGCAGTCCAGGCCCCGGAGCGAAGAGAACAAGAAC
GTCGACCGAATCCTACTACGCGGCCAGGGAATCTTCCCCTGCCTGCCACT
ACGACTCGAGTCACTGATACGGGCGCAACACCTATCATTTTGACCCCCGA
CCAGGACCCTCCATCAGAAGAAAACGAACCTCCCGCGAATCGGGGCGCCA
CGCCGAGTGCGCAGGACACGCGGGGTGATATCGGTGCCATGTACGCTCGG
TTCTACTTTATATTGTTTGTCCTCCTCATAATATCCGTCTGGTCCTTCCT
TTGGCCGAACCGTATGGGAGCAATATATGCTCGGACCCTCGGATTTATTT
ATCTGTCCTTCTGGGTACCCCAGATATATCGCAATGTCATGCGCAATTGC
CGCAAAGCACTGCGCTGGGAGTTTGTGGTTGGTCAAAGTTTCCTTCGACT
TTTTCCATTTATTTACTTTTTGACTGCACGCGGGAATGTGCTTTTCATTC
GACCCGACTCGACCACAGCCCTGGCACTGGCTGGCTGGGTGTGGGTTCAG
GTCTGGGTATTGGCTAGCCAGGACATTCTGGGACCCCGTTTCTTTGTTCC
TAGTGGGTGGGCGCCACCCGCCTATGACTATCATCCCGTGCTACGCGACA
GTTCAGGATCAGGTGACGATCTTGAGTCTGGCGGAGTCCTTCCGATTGGG
GCCTTGAGGGCTGACGAGCGGGAATACTCCATGGAAGCCAAGGATGAAGA
TAAGCAACGGGCGAAAGATAAGAAGAAGGCAGTGTTTGACTGTGCCATTT
GCATGCAAGAAATCGAGGTTCCTGTCCTTGCAGCTGCGGGTGGTGCAGGC
AGTAGCAGCATGACGGACGGGGCCACCAGTCTCCTTAGCCGACGGACATA
CATGGTCACCCCATGTCGGCATATCTTCCATAGTACCTGTCTCGAGAGCT
GGATGCGACTTCGATTGCAGTGTCCCATTTGCCGAGAGTCCATTCCACCA
GTGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000006.1:102480..104885+

>CAN33_9470-T1 ID=CAN33_9470-T1|Name=CAN33_9470-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2406bp|location=Sequence derived from alignment at NKJJ01000006.1:102480..104885+ (Aspergillus niger FDAARGOS_311)
ATGGATCACCGCGGTTCTTTCTTCTTCTTTCTGGTAGTTTTCTACCTGCT
TCTGAGCTCGCAGTCGCATTCGCCTCTGGTCTCCCAGGATGAAGAACACC
AAAGGGAGCTGGTGAGGGAGCGGAATGCGCTTCACATGTTGAACCAGTCT
CAGTATGGCGACTTCGATCCGATCACCGACAGATGGCTCCCGTTTTCCGG
TGTTAGGAAGAATGATAGCTATGCTTGGGATCTTCTTCCAGATGTTCAGG
ATAGAGCTCGGTCTCAATTGCGGTCCACCATGGCAGAGGCGGGCTTGAGG
CCTCCCAAGGCCCTTGCGGTGCCTGACGCTTTTTCCGGTCTTAACTTGAC
CCAATTACTCCTCCCAGTCTATCGTAATGCGACCGGTAAGCTGCGCGGGG
AATGGGTACGCCACAGACAGAACAAAGAACATGCCCTGTTGAACACGACT
GCAATTGCACTGGAGAACGAATACTTCACGCACGAGTTCAGTCACAATGT
TACGGGGGATAGTGGCACATTTTACCTTGATCTCCGGGAGGGCGGTGGTG
AGGAGGTTCAGTTGCCTGAAGGCCAGGTTCGGGAGATTCGAGCAACTTTG
GCTGTAGAGAGTGGCGATTTCTGGGGTAATACCTGGTATCTATCGCTGTT
CGGTGTTCATTTCCCGGAGACGGGTGCCATCATCTTGACTACAACCAGCG
AGAAATTTGGTGGCGTATTCACATTACCGCATCTGATGCTCTCGCCTGAC
GCATACAATCTCACCCACCAGCTTCTCGTCAAGTCCCTCTCGGACACTAT
ATCCGAGAAGCAGAATCGACCTCCTACCCTATTTCCTTGGTCCTCACTTG
TCGGGACGGAGCAGGTGGAATACCCGGCTCCAAAATGTGAACATATCGTC
TACCTCCAGCTGCACCCCGTCGCGATCCACGGCTACCTCACAGATAAAAC
GATCATCGAGCAGATAGAACAAGAGCTGAGATATCCAATGGGAGCCCCTA
TTCCGTCTCCACCACTGTTAGTCATGTCAGCTGTCGTCTTCTCGCCTGAT
TGTGGGTACATCCTGGAGACCAAGGGAGCTCCTGACTTCCCACCAACAGA
AGCACTCTATTTATCAGGACCGAAGATGGAGGAATTCGGCAAATTCTCTG
CTCGCATCATTTTTATGATCTCGGCCTTTTCTGTTGGCCAGATCGCATTA
CTCTTGCGCCAAATCAAAGAAGCATCCACGCCATCTACTAGAAGCCGGAT
CAGCTTCTACACGATCGCGCTCATGGCGTTCGGCGATTCTTTCGTACTTG
TCTTCATGCTGCTGGAGCTTTATCCGGCCGTTTCATTCCTTGTTATGACA
ACAGCATCCTTCTTGACCTTCCTCTCGGTCAGTTATATCGGAATGAAATT
TATGATGGAAATATGGGCAGTCCAGGCCCCGGAGCGAAGAGAACAAGAAC
GTCGACCGAATCCTACTACGCGGCCAGGGAATCTTCCCCTGCCTGCCACT
ACGACTCGAGTCACTGATACGGGCGCAACACCTATCATTTTGACCCCCGA
CCAGGACCCTCCATCAGAAGAAAACGAACCTCCCGCGAATCGGGGCGCCA
CGCCGAGTGCGCAGGACACGCGGGGTGATATCGGTGCCATGTACGCTCGG
TTCTACTTTATATTGTTTGTCCTCCTCATAATATCCGTCTGGTCCTTCCT
TTGGCCGAACCGTATGGGAGCAATATATGCTCGGACCCTCGGATTTATTT
ATCTGTCCTTCTGGGTACCCCAGATATATCGCAATGTCATGCGCAATTGC
CGCAAAGCACTGCGCTGGGAGTTTGTGGTTGGTCAAAGTTTCCTTCGACT
TTTTCCATTTATTTACTTTTTGACTGCACGCGGGAATGTGCTTTTCATTC
GACCCGACTCGACCACAGCCCTGGCACTGGCTGGCTGGGTGTGGGTTCAG
GTCTGGGTATTGGCTAGCCAGGACATTCTGGGACCCCGTTTCTTTGTTCC
TAGTGGGTGGGCGCCACCCGCCTATGACTATCATCCCGTGCTACGCGACA
GTTCAGGATCAGGTGACGATCTTGAGTCTGGCGGAGTCCTTCCGATTGGG
GCCTTGAGGGCTGACGAGCGGGAATACTCCATGGAAGCCAAGGATGAAGA
TAAGCAACGGGCGAAAGATAAGAAGAAGGCAGTGTTTGACTGTGCCATTT
GCATGCAAGAAATCGAGGTTCCTGTCCTTGCAGCTGCGGGTGGTGCAGGC
AGTAGCAGCATGACGGACGGGGCCACCAGTCTCCTTAGCCGACGGACATA
CATGGTCACCCCATGTCGGCATATCTTCCATAGTACCTGTCTCGAGAGCT
GGATGCGACTTCGATTGCAGTGTCCCATTTGCCGAGAGTCCATTCCACCA
GTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_9470CAN33_9470Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9470-T1.exon1CAN33_9470-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9470-T1.cdsCAN33_9470-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9470-T1CAN33_9470-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-22)
NoteBUSCO:EOG092619VG
DBxrefInterPro:IPR024766
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001841
DBxrefPFAM:PF14634
DBxrefPFAM:PF13639
DBxrefPFAM:PF12678
DBxrefPFAM:PF13923
DBxrefPFAM:PF00097
ProductZinc finger C3HC4 type (RING finger) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000006.1supercontigNKJJ01000006.1:102480..104885 +
Powered by Drupal