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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:114789..116164+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_9490-T1 ID=CAN33_9490-T1|Name=CAN33_9490-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1376bp|location=Sequence derived from alignment at NKJJ01000006.1:114789..116164+ (Aspergillus niger FDAARGOS_311)
ATGACTGACCCTCCTCAGACTATCCCTCTTCACCACCTTCCCTCATCCAT
CTCCTACAATGCCGCCACCACCACAGCCCTGGAATCTCACCTCAGCACAT
CTGACGAGGAGTCTAGCCCGCCTCCGCGTTACACCCGCGAGAATGACCCC
TTCCAACTAGCCTCGAAGCTGAAAAGTCCCGAAGAAATCGCCCAGATGCA
ACCCCAAGCCAACATCTCCCGCAAACGTCACACCTCCGGCTGCCTCCCGC
ACAACGCCAACCCCCGCAATGCGCTCGCTTCCTCCCTAGCCTCCAAACAA
CTTCAAACGTTCTACGAATCCCAGAATGAGAACATCCAACGCATGCTCAA
GCCCGTCGAAGAACACGTCCGCGATGCCCGTGAAACAAACAGCAGCAACC
AACTCAAGTACAAAATCGCCGTCTGGGGCTCTTTCGCCGCCAATGTCATC
CTCTGCGTTCTTCAACTCTACGGGGCCATTTCCTCCAGCTCACTGTCCTT
GTACACAACCATGGCCGACGCCGTCTTTGATCCTCTCTCCAATATCACTC
TCCTCGTCTCCAACAAGGCCGTCAATCGCGTCGACCCTCGTAAATTCCCC
GCCGGAAAAGCTCGTATCGAAACAGCCGGCAACATCTGCTTCTGTTTTCT
CATGACGGCTGTCTCTTTCATCCTCATTGCTTTCTCTGTCCGCGAACTCG
CCGAAGGATCCAACTCCGAGACGGGATCTTTCCACCTCCCCTCCGTTGTC
GCCGTCATCGTCGCCTTTTGTACTAAATTCGTGCTTTTCCTGTACTGCTT
CGCGCTGAAGGATCAGTATTCCCAGGTCATGATCCTTTGGGAAGACCACC
GCAATGACCTCCTTATCAACGGATTCGGTATCCTTACCAGCGTAGGTGGA
GGTAAACTGCGCTGGTGGATTGACCCCGCGGGAGCTATCGTCCTCTCCGT
GCTTGTCAGTTGTTTGTGGCTGTTCAGCGCGTATCGCGAGTTCCAGTTGC
TTATCGGTGTTACGGCCGATACGAAGATGCAACAGTTGATTACATATATC
TGTGAGCTTATCCCCCTCTCTTATCTCCTTTCCACTCCCGCCTATAGATG
AAAGATAAAAGCTAATAACGTGTTAATCGTAAAGCAATGACCCACTCCCC
CCTCATCACCGCCATCGATACCGTCCGTGCATACACCTCCGGTCCTCGAT
TGCTTGTGGAAGTGGACATCGTCATGGACCCGAACGATTCGCTGCGGGCT
ACGCATGATGTCGCGGAGGAATTGCAGATGAAGTTGGAGTCTTTGCCAGA
CGTGGAGCGTGCGTATGTGCATGTGGATTATGAGACCACGCATAAGCCGG
AGCACTTCTTGAAGAAGGAGTTGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:114789..116164+ >CAN33_9490-T1 ID=CAN33_9490-T1|Name=CAN33_9490-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2586bp|location=Sequence derived from alignment at NKJJ01000006.1:114789..116164+ (Aspergillus niger FDAARGOS_311)
ATGACTGACCCTCCTCAGACTATCCCTCTTCACCACCTTCCCTCATCCAT
CTCCTACAATGCCGCCACCACCACAGCCCTGGAATCTCACCTCAGCACAT
CTGACGAGGAGTCTAGCCCGCCTCCGCGTTACACCCGCGAGAATGACCCC
TTCCAACTAGCCTCGAAGCTGAAAAGTCCCGAAGAAATCGCCCAGATGCA
ACCCCAAGCCAACATCTCCCGCAAACGTCACACCTCCGGCTGCCTCCCGC
ACAACGCCAACCCCCGCAATGCGCTCGCTTCCTCCCTAGCCTCCAAACAA
CTTCAAACGTTCTACGAATCCCAGAATGAGAACATCCAACGCATGCTCAA
GCCCGTCGAAGAACACGTCCGCGATGCCCGTGAAACAAACAGCAGCAACC
AACTCAAGTACAAAATCGCCGTCTGGGGCTCTTTCGCCGCCAATGTCATC
CTCTGCGTTCTTCAACTCTACGGGGCCATTTCCTCCAGCTCACTGTCCTT
GTACACAACCATGGCCGACGCCGTCTTTGATCCTCTCTCCAATATCACTC
TCCTCGTCTCCAACAAGGCCGTCAATCGCGTCGACCCTCGTAAATTCCCC
GCCGGAAAAGCTCGTATCGAAACAGCCGGCAACATCTGCTTCTGTTTTCT
CATGACGGCTGTCTCTTTCATCCTCATTGCTTTCTCTGTCCGCGAACTCG
CCGAAGGATCCAACTCCGAGACGGGATCTTTCCACCTCCCCTCCGTTGTC
GCCGTCATCGTCGCCTTTTGTACTAAATTCGTGCTTTTCCTGTACTGCTT
CGCGCTGAAGGATCAGTATTCCCAGGTCATGATCCTTTGGGAAGACCACC
GCAATGACCTCCTTATCAACGGATTCGGTATCCTTACCAGCGTAGGTGGA
GGTAAACTGCGCTGGTGGATTGACCCCGCGGGAGCTATCGTCCTCTCCGT
GCTTGTCAGTTGTTTGTGGCTGTTCAGCGCGTATCGCGAGTTCCAGTTGC
TTATCGGTGTTACGGCCGATACGAAGATGCAACAGTTGATTACATATATC
TCAATGACCCACTCCCCCCTCATCACCGCCATCGATACCGTCCGTGCATA
CACCTCCGGTCCTCGATTGCTTGTGGAAGTGGACATCGTCATGGACCCGA
ACGATTCGCTGCGGGCTACGCATGATGTCGCGGAGGAATTGCAGATGAAG
TTGGAGTCTTTGCCAGACGTGGAGCGTGCGTATGTGCATGTGGATTATGA
GACCACGCATAAGCCGGAGCACTTCTTGAAGAAGGAGTTGTAGATGACTG
ACCCTCCTCAGACTATCCCTCTTCACCACCTTCCCTCATCCATCTCCTAC
AATGCCGCCACCACCACAGCCCTGGAATCTCACCTCAGCACATCTGACGA
GGAGTCTAGCCCGCCTCCGCGTTACACCCGCGAGAATGACCCCTTCCAAC
TAGCCTCGAAGCTGAAAAGTCCCGAAGAAATCGCCCAGATGCAACCCCAA
GCCAACATCTCCCGCAAACGTCACACCTCCGGCTGCCTCCCGCACAACGC
CAACCCCCGCAATGCGCTCGCTTCCTCCCTAGCCTCCAAACAACTTCAAA
CGTTCTACGAATCCCAGAATGAGAACATCCAACGCATGCTCAAGCCCGTC
GAAGAACACGTCCGCGATGCCCGTGAAACAAACAGCAGCAACCAACTCAA
GTACAAAATCGCCGTCTGGGGCTCTTTCGCCGCCAATGTCATCCTCTGCG
TTCTTCAACTCTACGGGGCCATTTCCTCCAGCTCACTGTCCTTGTACACA
ACCATGGCCGACGCCGTCTTTGATCCTCTCTCCAATATCACTCTCCTCGT
CTCCAACAAGGCCGTCAATCGCGTCGACCCTCGTAAATTCCCCGCCGGAA
AAGCTCGTATCGAAACAGCCGGCAACATCTGCTTCTGTTTTCTCATGACG
GCTGTCTCTTTCATCCTCATTGCTTTCTCTGTCCGCGAACTCGCCGAAGG
ATCCAACTCCGAGACGGGATCTTTCCACCTCCCCTCCGTTGTCGCCGTCA
TCGTCGCCTTTTGTACTAAATTCGTGCTTTTCCTGTACTGCTTCGCGCTG
AAGGATCAGTATTCCCAGGTCATGATCCTTTGGGAAGACCACCGCAATGA
CCTCCTTATCAACGGATTCGGTATCCTTACCAGCGTAGGTGGAGGTAAAC
TGCGCTGGTGGATTGACCCCGCGGGAGCTATCGTCCTCTCCGTGCTTGTC
AGTTGTTTGTGGCTGTTCAGCGCGTATCGCGAGTTCCAGTTGCTTATCGG
TGTTACGGCCGATACGAAGATGCAACAGTTGATTACATATATCTCAATGA
CCCACTCCCCCCTCATCACCGCCATCGATACCGTCCGTGCATACACCTCC
GGTCCTCGATTGCTTGTGGAAGTGGACATCGTCATGGACCCGAACGATTC
GCTGCGGGCTACGCATGATGTCGCGGAGGAATTGCAGATGAAGTTGGAGT
CTTTGCCAGACGTGGAGCGTGCGTATGTGCATGTGGATTATGAGACCACG
CATAAGCCGGAGCACTTCTTGAAGAAGGAGTTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008324 | cation transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006812 | cation transport |
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR027469 |
| DBxref | InterPro:IPR036837 |
| DBxref | InterPro:IPR002524 |
| DBxref | InterPro:IPR027470 |
| DBxref | PFAM:PF16916 |
| DBxref | PFAM:PF01545 |
| Product | Cation efflux family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:114789..116164 + |
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