|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:145339..146317- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_9550-T1 ID=CAN33_9550-T1|Name=CAN33_9550-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=979bp|location=Sequence derived from alignment at NKJJ01000006.1:145339..146317- (Aspergillus niger FDAARGOS_311)
ATGCCCTTCGAAACCGCCATCACCTCCACCTTCCGGGGCTCTTCCACGGC
CCTTGGTTTCTGGCTCACGTATGCTCATCCACATCAACTCTTCTTAGCTC
TTAAGTCCATGAAAAACTCTATCTAACTGAATGAATACAGCCTCCCTAGT
GCCGCTGTCGCCAAGACCATCCTGCACGGCCAACCCCCCAGCCCAGGCCG
ATTCAGCTGGGTCCTAGTAGACGCCGAGCACGGTTTAATATCCGACCGCC
ATTACTATGAGGTTAGTAGATCTGCCATTTATCCAAATTCATGCCATGAC
TGACCAATATTAGCTCTTCAATGCCATCGCATCCGAGAACGTAAGCCCGA
TTGTCCGGGTCCCCTGCGCAGAGGAATGGATGATCAAACGGGCGCTGGAC
GCCGGTGCTCACGGAGTCATGACCCCCATGTGCCATTCAGAAGTGCGTAC
CCAGATCTTCTTATTCACATACTTCCAAAAATGTATTAAGTCTAATAATT
TAAACCAGATCGAAGCGGCCAAAATCGTCCAATGGACCAAATACCCACCC
CTCGGCACACGAGGCTACGGCCCCATGTTCGCGCCGCACGCATTCCCCGG
CGTCGCGCCCGGTGAAGAGTATGACGAAGGCTCGCAAACAGGCACGATTG
TAGTTGTGCAGATTGAGTCGAAGGCTGGTGTCGAGAATGTAGAGAAGATC
GCAGCTGTTGAAGGCGTCGATGTCCTGTTCATCGGACCCTTTGATTTGGC
GAAGCAGATGGGTGTTACGAGGGGCGGGGAGGAGCATGAAGCGGCTATTC
AGCGAATTTTGAAGGCTGCGCATGCAGCGGGTAAGAAGGCCGCTATCTTC
TGTACGGATGGTAAGGATTCCCGCGTGCGTGCGGAGCAGGGATTTGATAT
GATTTCGGTGATTACGGATGTCGGGGTTTTTAGGGCGGGAATGTTGAATG
AGTTGAAGAGCGTTACGGAGGGGCGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:145339..146317- >CAN33_9550-T1 ID=CAN33_9550-T1|Name=CAN33_9550-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3156bp|location=Sequence derived from alignment at NKJJ01000006.1:145339..146317- (Aspergillus niger FDAARGOS_311)
ATCGAAGCGGCCAAAATCGTCCAATGGACCAAATACCCACCCCTCGGCAC
ACGAGGCTACGGCCCCATGTTCGCGCCGCACGCATTCCCCGGCGTCGCGC
CCGGTGAAGAGTATGACGAAGGCTCGCAAACAGGCACGATTGTAGTTGTG
CAGATTGAGTCGAAGGCTGGTGTCGAGAATGTAGAGAAGATCGCAGCTGT
TGAAGGCGTCGATGTCCTGTTCATCGGACCCTTTGATTTGGCGAAGCAGA
TGGGTGTTACGAGGGGCGGGGAGGAGCATGAAGCGGCTATTCAGCGAATT
TTGAAGGCTGCGCATGCAGCGGGTAAGAAGGCCGCTATCTTCTGTACGGA
TGGTAAGGATTCCCGCGTGCGTGCGGAGCAGGGATTTGATATGATTTCGG
TGATTACGGATGTCGGGGTTTTTAGGGCGGGAATGTTGAATGAGTTGAAG
AGCGTTACGGAGGGGCGGTAGCTCTTCAATGCCATCGCATCCGAGAACGT
AAGCCCGATTGTCCGGGTCCCCTGCGCAGAGGAATGGATGATCAAACGGG
CGCTGGACGCCGGTGCTCACGGAGTCATGACCCCCATGTGCCATTCAGAA
CCTCCCTAGTGCCGCTGTCGCCAAGACCATCCTGCACGGCCAACCCCCCA
GCCCAGGCCGATTCAGCTGGGTCCTAGTAGACGCCGAGCACGGTTTAATA
TCCGACCGCCATTACTATGAGATGCCCTTCGAAACCGCCATCACCTCCAC
CTTCCGGGGCTCTTCCACGGCCCTTGGTTTCTGGCTCACATCGAAGCGGC
CAAAATCGTCCAATGGACCAAATACCCACCCCTCGGCACACGAGGCTACG
GCCCCATGTTCGCGCCGCACGCATTCCCCGGCGTCGCGCCCGGTGAAGAG
TATGACGAAGGCTCGCAAACAGGCACGATTGTAGTTGTGCAGATTGAGTC
GAAGGCTGGTGTCGAGAATGTAGAGAAGATCGCAGCTGTTGAAGGCGTCG
ATGTCCTGTTCATCGGACCCTTTGATTTGGCGAAGCAGATGGGTGTTACG
AGGGGCGGGGAGGAGCATGAAGCGGCTATTCAGCGAATTTTGAAGGCTGC
GCATGCAGCGGGTAAGAAGGCCGCTATCTTCTGTACGGATGGTAAGGATT
CCCGCGTGCGTGCGGAGCAGGGATTTGATATGATTTCGGTGATTACGGAT
GTCGGGGTTTTTAGGGCGGGAATGTTGAATGAGTTGAAGAGCGTTACGGA
GGGGCGGTAGCTCTTCAATGCCATCGCATCCGAGAACGTAAGCCCGATTG
TCCGGGTCCCCTGCGCAGAGGAATGGATGATCAAACGGGCGCTGGACGCC
GGTGCTCACGGAGTCATGACCCCCATGTGCCATTCAGAACCTCCCTAGTG
CCGCTGTCGCCAAGACCATCCTGCACGGCCAACCCCCCAGCCCAGGCCGA
TTCAGCTGGGTCCTAGTAGACGCCGAGCACGGTTTAATATCCGACCGCCA
TTACTATGAGATGCCCTTCGAAACCGCCATCACCTCCACCTTCCGGGGCT
CTTCCACGGCCCTTGGTTTCTGGCTCACATCGAAGCGGCCAAAATCGTCC
AATGGACCAAATACCCACCCCTCGGCACACGAGGCTACGGCCCCATGTTC
GCGCCGCACGCATTCCCCGGCGTCGCGCCCGGTGAAGAGTATGACGAAGG
CTCGCAAACAGGCACGATTGTAGTTGTGCAGATTGAGTCGAAGGCTGGTG
TCGAGAATGTAGAGAAGATCGCAGCTGTTGAAGGCGTCGATGTCCTGTTC
ATCGGACCCTTTGATTTGGCGAAGCAGATGGGTGTTACGAGGGGCGGGGA
GGAGCATGAAGCGGCTATTCAGCGAATTTTGAAGGCTGCGCATGCAGCGG
GTAAGAAGGCCGCTATCTTCTGTACGGATGGTAAGGATTCCCGCGTGCGT
GCGGAGCAGGGATTTGATATGATTTCGGTGATTACGGATGTCGGGGTTTT
TAGGGCGGGAATGTTGAATGAGTTGAAGAGCGTTACGGAGGGGCGGTAGC
TCTTCAATGCCATCGCATCCGAGAACGTAAGCCCGATTGTCCGGGTCCCC
TGCGCAGAGGAATGGATGATCAAACGGGCGCTGGACGCCGGTGCTCACGG
AGTCATGACCCCCATGTGCCATTCAGAACCTCCCTAGTGCCGCTGTCGCC
AAGACCATCCTGCACGGCCAACCCCCCAGCCCAGGCCGATTCAGCTGGGT
CCTAGTAGACGCCGAGCACGGTTTAATATCCGACCGCCATTACTATGAGA
TGCCCTTCGAAACCGCCATCACCTCCACCTTCCGGGGCTCTTCCACGGCC
CTTGGTTTCTGGCTCACATCGAAGCGGCCAAAATCGTCCAATGGACCAAA
TACCCACCCCTCGGCACACGAGGCTACGGCCCCATGTTCGCGCCGCACGC
ATTCCCCGGCGTCGCGCCCGGTGAAGAGTATGACGAAGGCTCGCAAACAG
GCACGATTGTAGTTGTGCAGATTGAGTCGAAGGCTGGTGTCGAGAATGTA
GAGAAGATCGCAGCTGTTGAAGGCGTCGATGTCCTGTTCATCGGACCCTT
TGATTTGGCGAAGCAGATGGGTGTTACGAGGGGCGGGGAGGAGCATGAAG
CGGCTATTCAGCGAATTTTGAAGGCTGCGCATGCAGCGGGTAAGAAGGCC
GCTATCTTCTGTACGGATGGTAAGGATTCCCGCGTGCGTGCGGAGCAGGG
ATTTGATATGATTTCGGTGATTACGGATGTCGGGGTTTTTAGGGCGGGAA
TGTTGAATGAGTTGAAGAGCGTTACGGAGGGGCGGTAGCTCTTCAATGCC
ATCGCATCCGAGAACGTAAGCCCGATTGTCCGGGTCCCCTGCGCAGAGGA
ATGGATGATCAAACGGGCGCTGGACGCCGGTGCTCACGGAGTCATGACCC
CCATGTGCCATTCAGAACCTCCCTAGTGCCGCTGTCGCCAAGACCATCCT
GCACGGCCAACCCCCCAGCCCAGGCCGATTCAGCTGGGTCCTAGTAGACG
CCGAGCACGGTTTAATATCCGACCGCCATTACTATGAGATGCCCTTCGAA
ACCGCCATCACCTCCACCTTCCGGGGCTCTTCCACGGCCCTTGGTTTCTG
GCTCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015813 |
| DBxref | InterPro:IPR005000 |
| DBxref | InterPro:IPR040442 |
| DBxref | PFAM:PF03328 |
| Product | HpcH/HpaI aldolase/citrate lyase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:145339..146317 - |
|
