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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:196217..197458- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_9620-T1 ID=CAN33_9620-T1|Name=CAN33_9620-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1242bp|location=Sequence derived from alignment at NKJJ01000006.1:196217..197458- (Aspergillus niger FDAARGOS_311)
ATGAATGTCATTTTGAGTATGGCCGACTATAATCAGTCCACATTCCATGA
CCCATTCGGGGCCTAGTTGGACTCGGAGAGAGAAAGTCTCTGGTTCATTG
ATGTCATCAGGTATAACCCTTGCCATATCCCTGAGAAGGAAAGCATATTA
ATACTGCGCGGTGACCTCCCTCACTTATCTAGCATCAACAGTTTGACAGC
ATCAACTATCCACTCATATCATCCACTCCCACCCTAACACCAGAATAATG
GCTTCCAAATACGCTGCAGCCCACAAATCCCCCAAGGACCCGGTGACGCC
CGTCCTACCGCCTCCCAAATCATCAAAGATCAAAACCTCGAAGACAAGCT
CTCCGACAAGACCATCCTGATCACGGGCTGCTCCTCGGGACTAGGTGTCG
AGACCGCGCGCGCACTCCACCTCACCGGCGCAACCCTCTACCTAACCGTC
CGCGATGTCAAAAAAGCAGAGGCCAACCTTGGTGACCTGGCCAACAGTCC
CCGAGTTCATTTCCTCCACTTAGACCTGAACTCGCTTGACTCCGTGCGCG
CCTGCGCCGAAGACTTCAACTCCAAGAGCAAAAAGCTTAACATTCTAATT
GAAAACGCCGGCGTCATGGCCTGCCCGGAAGGCCGGACAGCAGATGGCTT
CGAGACTCAAATCGGAAGCAACCACCTCGCGCACTTCCTTCTCTTTATCC
TTCTGAAACCTACCCTCTTGGCTTCATCAACACCCGAATTCAACTCCCGT
GTTGTGATACTTTCCTCCGCCGCTCACAGAATTTCAAGCGTCCACCTCGA
CAACATCAGTCTCGAGGGTGAATACGAGCCGTGGAAGGCATATGGCCAGA
GCAAGACCGCTGGGATCTGGGCTGCTAATGAGATCGAAAGACGGTATGGT
GCTCAGGGCCTCCATGCTTTCAGTTTGCATCCGGGTGGCATCAATACGGA
TCTCCAGCGTCATATTTCGCAGGAGCAGCAGGCCGCATGGGGTCAAGATG
AAGCACTGATGAAGACCTTTAAGAGTCCGGAACAGGGCGCTGCTACGACT
GTGCTGGCGGCTGTGGCCAAAGAGCTCGAGGGCCAGGGAGGGAAGTACTT
GGACAATTGTCAGATTGCTGAGCCATATGACCCGAGTAGTGGCACCTGGG
GTCCGGGGTACGCTGCTTGGGCGTATGATGTGGACGGAGAGAGGAAGTTC
TGGAAACTGAGTTTGGAGCTGCTCGGTCTGAAGGATGAGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:196217..197458- >CAN33_9620-T1 ID=CAN33_9620-T1|Name=CAN33_9620-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2076bp|location=Sequence derived from alignment at NKJJ01000006.1:196217..197458- (Aspergillus niger FDAARGOS_311)
CCCACAAATCCCCCAAGGACCCGGTGACGCCCGTCCTACCGCCTCCCAAA
TCATCAAAGATCAAAACCTCGAAGACAAGCTCTCCGACAAGACCATCCTG
ATCACGGGCTGCTCCTCGGGACTAGGTGTCGAGACCGCGCGCGCACTCCA
CCTCACCGGCGCAACCCTCTACCTAACCGTCCGCGATGTCAAAAAAGCAG
AGGCCAACCTTGGTGACCTGGCCAACAGTCCCCGAGTTCATTTCCTCCAC
TTAGACCTGAACTCGCTTGACTCCGTGCGCGCCTGCGCCGAAGACTTCAA
CTCCAAGAGCAAAAAGCTTAACATTCTAATTGAAAACGCCGGCGTCATGG
CCTGCCCGGAAGGCCGGACAGCAGATGGCTTCGAGACTCAAATCGGAAGC
AACCACCTCGCGCACTTCCTTCTCTTTATCCTTCTGAAACCTACCCTCTT
GGCTTCATCAACACCCGAATTCAACTCCCGTGTTGTGATACTTTCCTCCG
CCGCTCACAGAATTTCAAGCGTCCACCTCGACAACATCAGTCTCGAGGGT
GAATACGAGCCGTGGAAGGCATATGGCCAGAGCAAGACCGCTGGGATCTG
GGCTGCTAATGAGATCGAAAGACGGTATGGTGCTCAGGGCCTCCATGCTT
TCAGTTTGCATCCGGGTGGCATCAATACGGATCTCCAGCGTCATATTTCG
CAGGAGCAGCAGGCCGCATGGGGTCAAGATGAAGCACTGATGAAGACCTT
TAAGAGTCCGGAACAGGGCGCTGCTACGACTGTGCTGGCGGCTGTGGCCA
AAGAGCTCGAGGGCCAGGGAGGGAAGTACTTGGACAATTGTCAGATTGCT
GAGCCATATGACCCGAGTAGTGGCACCTGGGGTCCGGGGTACGCTGCTTG
GGCGTATGATGTGGACGGAGAGAGGAAGTTCTGGAAACTGAGTTTGGAGC
TGCTCGGTCTGAAGGATGAGTAGATGAATGTCATTTTGAGTATGGCCGAC
TATAATCAGTCCACATTCCATGACCCATTCGGGGCCTACCCACAAATCCC
CCAAGGACCCGGTGACGCCCGTCCTACCGCCTCCCAAATCATCAAAGATC
AAAACCTCGAAGACAAGCTCTCCGACAAGACCATCCTGATCACGGGCTGC
TCCTCGGGACTAGGTGTCGAGACCGCGCGCGCACTCCACCTCACCGGCGC
AACCCTCTACCTAACCGTCCGCGATGTCAAAAAAGCAGAGGCCAACCTTG
GTGACCTGGCCAACAGTCCCCGAGTTCATTTCCTCCACTTAGACCTGAAC
TCGCTTGACTCCGTGCGCGCCTGCGCCGAAGACTTCAACTCCAAGAGCAA
AAAGCTTAACATTCTAATTGAAAACGCCGGCGTCATGGCCTGCCCGGAAG
GCCGGACAGCAGATGGCTTCGAGACTCAAATCGGAAGCAACCACCTCGCG
CACTTCCTTCTCTTTATCCTTCTGAAACCTACCCTCTTGGCTTCATCAAC
ACCCGAATTCAACTCCCGTGTTGTGATACTTTCCTCCGCCGCTCACAGAA
TTTCAAGCGTCCACCTCGACAACATCAGTCTCGAGGGTGAATACGAGCCG
TGGAAGGCATATGGCCAGAGCAAGACCGCTGGGATCTGGGCTGCTAATGA
GATCGAAAGACGGTATGGTGCTCAGGGCCTCCATGCTTTCAGTTTGCATC
CGGGTGGCATCAATACGGATCTCCAGCGTCATATTTCGCAGGAGCAGCAG
GCCGCATGGGGTCAAGATGAAGCACTGATGAAGACCTTTAAGAGTCCGGA
ACAGGGCGCTGCTACGACTGTGCTGGCGGCTGTGGCCAAAGAGCTCGAGG
GCCAGGGAGGGAAGTACTTGGACAATTGTCAGATTGCTGAGCCATATGAC
CCGAGTAGTGGCACCTGGGGTCCGGGGTACGCTGCTTGGGCGTATGATGT
GGACGGAGAGAGGAAGTTCTGGAAACTGAGTTTGGAGCTGCTCGGTCTGA
AGGATGAGTAGATGAATGTCATTTTGAGTATGGCCGACTATAATCAGTCC
ACATTCCATGACCCATTCGGGGCCTA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:196217..197458 - |
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