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CAN33_9655-T1, CAN33_9655-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9655-T1
Unique NameCAN33_9655-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000006.1:213997..215781-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9655-T1 ID=CAN33_9655-T1|Name=CAN33_9655-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1785bp|location=Sequence derived from alignment at NKJJ01000006.1:213997..215781- (Aspergillus niger FDAARGOS_311)
ATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCC
TTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATAT
GCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT
GTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAA
TAACACTTACCATATCAACTCTGTTATGAACACGATATGGCTCGATGATG
TGGAGATTGATCTACAGGGTACACTCTTGGTAAATAAATTACCTCGGTAT
GTAATATTAGTTTCTTGTTTGTTTCTGACAATGGACAGTGGAGCACCAAC
ATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATC
CACTGCCTGGATCTTGGGTGGCAAAGACATTACCTTTGAAGGACATGGAT
ACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCG
ACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAAT
GGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGTAGG
TATCGTTATTCATATTGCGCCATCTTGCTAAATGAATGCATGTAGCTAAC
AATACAGGACAATGTCTATCATTCACACCTCGAACTCATGGTTCGATTCC
ATCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACGTTAGTACCG
TTCCGCATGTTGAATCGGGATGCAAGTCACGCCTCTGACCCTATTTAAAT
AGAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTCA
CGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAAT
TCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCAT
TGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAAC
GCCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTAC
TTCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGG
CGGGGGTTTGGGATGTACGTCCGCGTAAATTTATCCAAGTCCTTTGTTGA
TTTTAACCATCCTACCATGGCAGATGCATCCGACATCGTCGCAACCAACT
TGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTACG
ACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCG
CGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATGTTG
CGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAG
AATGTAAGTTTGCGAATAGCGGGGAATACGACCCATGCAGAAGAGTATCT
GTGTGGGAATGTGGATGGGACCGTTGGGTTCAATTGCACTGGAGATGTGT
GTGTTGGGTCAAGTGCTACTGGGGGATGTTAGCCTAGCAAACAGGTTCTC
GTTGAGGCGCTTCAAGATTTCCAGTAGCATAAGTACTGAACAGCTTGGTT
CAACATCGTCAGTTATGTATGTCCAGCTACTGATGTGATTGATTAGAATG
TCAGCAAACCTATTTGGTTGCCAACGTAGTTATAGTAATTAGATGTTGAT
GTTGATGGGAATGTACCGATTGCTGATTCTGAACGCCTCCAATATAATAA
CGAAACATACAAACCCATTATTGTTTTAGCTATAG
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Coding sequence (CDS) from alignment at NKJJ01000006.1:213997..215781-

>CAN33_9655-T1 ID=CAN33_9655-T1|Name=CAN33_9655-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7002bp|location=Sequence derived from alignment at NKJJ01000006.1:213997..215781- (Aspergillus niger FDAARGOS_311)
CTATAGATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTC
AAAGGTGCTCCATTTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTC
AGGGAACTGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCG
ATATCTCTGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGT
GCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATAGAACACCGACGGT
GCAAATACTATCTACAGCAAAAACATCACATTCACGAACTGGGAAGTCGT
CAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGA
TCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATT
GGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAAA
CATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGG
GTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATGA
CAATGTCTATCATTCACACCTCGAACTCATGGTTCGATTCCATCTACGTG
AACAATCTGTATGATGACGGCGATTCAGCACTGGAGCACCAACATCTCCT
ACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCC
TGGATCTTGGGTGGCAAAGACATTACCTTTGAAGGACATGGATACGGAAC
ATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGA
ATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCA
GTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGATGGCACCTATA
GCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCCTTCCATCTCGCT
ATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATATGCGAAGTCAAAC
CAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATTGTCGACGCGCTG
ACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACCA
TATCAACTCTGTTATGAACACGATATGGCTCGATGATGTGGAGATTGATC
TACAGGGTACACTCTTGCTATAGATGCATCCGACATCGTCGCAACCAACT
TGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTACG
ACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCG
CGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATGTTG
CGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAG
AATAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTC
ACGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAA
TTCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCA
TTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAA
CGCCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTA
CTTCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCG
GCGGGGGTTTGGGATGACAATGTCTATCATTCACACCTCGAACTCATGGT
TCGATTCCATCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACTG
GAGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACC
AGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTACCTTTGAA
GGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATA
TGTTGGATCGACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCT
CGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAG
ATGTGATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATT
GTCCCTTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAAC
CATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTG
CAATTGTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTC
TCAAATAACACTTACCATATCAACTCTGTTATGAACACGATATGGCTCGA
TGATGTGGAGATTGATCTACAGGGTACACTCTTGCTATAGATGCATCCGA
CATCGTCGCAACCAACTTGAAGACCAACAACCTCAAAGGTGCTCCATTTA
CAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAAT
TCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACGAC
AGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTG
AAGATATCACTATCGAGAATAGAACACCGACGGTGCAAATACTATCTACA
GCAAAAACATCACATTCACGAACTGGGAAGTCGTCAACGGTGATGATAGT
ATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGCACCTT
CACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTG
CTTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACATATGAGAAG
ACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATA
CCCGCCTAATGGAGGCGGCGGGGGTTTGGGATGACAATGTCTATCATTCA
CACCTCGAACTCATGGTTCGATTCCATCTACGTGAACAATCTGTATGATG
ACGGCGATTCAGCACTGGAGCACCAACATCTCCTACTGGCTTAACCACTC
CCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCA
AAGACATTACCTTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGC
CAAACCTGGTATAAATATGTTGGATCGACGTCGAATTACCCACGGCGACC
GAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGC
GATTCGTGCAGAGCCAGATGTGATGGCACCTATAGCGTTGAAAATCCTCC
TCTTTACCTCTCTCATTGTCCCTTCCATCTCGCTATCCGACCAAGCGAGG
AATGGTCATGCAAGAACCATATGCGAAGTCAAACCAGGCGGATCCTCAGA
AATTGATGATGTGCCTGCAATTGTCGACGCGCTGACTACCTGTGGTTCCG
GTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAACTCTGTTATG
AACACGATATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTT
GCTATAGATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCT
CAAAGGTGCTCCATTTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTT
CAGGGAACTGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCACC
GATATCTCTGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAG
TGCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATAGAACACCGACGG
TGCAAATACTATCTACAGCAAAAACATCACATTCACGAACTGGGAAGTCG
TCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACG
ATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTAT
TGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAA
ACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACG
GGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATG
ACAATGTCTATCATTCACACCTCGAACTCATGGTTCGATTCCATCTACGT
GAACAATCTGTATGATGACGGCGATTCAGCACTGGAGCACCAACATCTCC
TACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGC
CTGGATCTTGGGTGGCAAAGACATTACCTTTGAAGGACATGGATACGGAA
CATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCG
AATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGC
AGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGATGGCACCTAT
AGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCCTTCCATCTCGC
TATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATATGCGAAGTCAAA
CCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATTGTCGACGCGCT
GACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACC
ATATCAACTCTGTTATGAACACGATATGGCTCGATGATGTGGAGATTGAT
CTACAGGGTACACTCTTGCTATAGATGCATCCGACATCGTCGCAACCAAC
TTGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTAC
GACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTC
GCGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATGTT
GCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGA
GAATAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATT
CACGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCA
ATTCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGC
ATTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGA
ACGCCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGT
ACTTCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGC
GGCGGGGGTTTGGGATGACAATGTCTATCATTCACACCTCGAACTCATGG
TTCGATTCCATCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACT
GGAGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTAC
CAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTACCTTTGA
AGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAAT
ATGTTGGATCGACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTC
TCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCA
GATGTGATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCAT
TGTCCCTTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAA
CCATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCT
GCAATTGTCGACGCGCTGACTACCTGTGGTTCCGGTGGTCGGGTGATATT
CTCAAATAACACTTACCATATCAACTCTGTTATGAACACGATATGGCTCG
ATGATGTGGAGATTGATCTACAGGGTACACTCTTGCTATAGATGCATCCG
ACATCGTCGCAACCAACTTGAAGACCAACAACCTCAAAGGTGCTCCATTT
ACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAA
TTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACGA
CAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGT
GAAGATATCACTATCGAGAATAGAACACCGACGGTGCAAATACTATCTAC
AGCAAAAACATCACATTCACGAACTGGGAAGTCGTCAACGGTGATGATAG
TATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGCACCT
TCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGT
GCTTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACATATGAGAA
GACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGAT
ACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATGACAATGTCTATCATTC
ACACCTCGAACTCATGGTTCGATTCCATCTACGTGAACAATCTGTATGAT
GACGGCGATTCAGCACTGGAGCACCAACATCTCCTACTGGCTTAACCACT
CCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGC
AAAGACATTACCTTTGAAGGACATGGATACGGAACATTCAATGGAAGTGG
CCAAACCTGGTATAAATATGTTGGATCGACGTCGAATTACCCACGGCGAC
CGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTG
CGATTCGTGCAGAGCCAGATGTGATGGCACCTATAGCGTTGAAAATCCTC
CTCTTTACCTCTCTCATTGTCCCTTCCATCTCGCTATCCGACCAAGCGAG
GAATGGTCATGCAAGAACCATATGCGAAGTCAAACCAGGCGGATCCTCAG
AAATTGATGATGTGCCTGCAATTGTCGACGCGCTGACTACCTGTGGTTCC
GGTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAACTCTGTTAT
GAACACGATATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCT
TG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_9655CAN33_9655Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9655-T1CAN33_9655-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9655-T1.cdsCAN33_9655-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9655-T1.exon6CAN33_9655-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_9655-T1.exon5CAN33_9655-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_9655-T1.exon4CAN33_9655-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_9655-T1.exon3CAN33_9655-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_9655-T1.exon2CAN33_9655-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_9655-T1.exon1CAN33_9655-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefPFAM:PF00295
ProductGlycosyl hydrolases family 28 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000006.1supercontigNKJJ01000006.1:213997..215781 -
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