You are here

Home

CAN33_9665-T1, CAN33_9665-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9665-T1
Unique NameCAN33_9665-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000006.1:218048..220008-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9665-T1 ID=CAN33_9665-T1|Name=CAN33_9665-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1961bp|location=Sequence derived from alignment at NKJJ01000006.1:218048..220008- (Aspergillus niger FDAARGOS_311)
ATGTCTAGGGTCAAGACGGGCACCTCAATTGCATGCGATTATAAAACCAA
TGATATATACTATAGCGCACTTACAGGAATACTTCCGCAGCTTGGGTGCC
GGGATGATGAGCAGAATACTGTTCTGAAAGAATTCCTGGCGATACTGCGA
TCTCAGCCGATGCCCTCTCTCAACCAGATAACATTTGATGCATACAAAGA
ACACAAAAGTAAAAGTAATGCTGGAATGTAAGTGTCTAGGGTTGCGTGCG
ATTGTAGCATAGCGTTGACATAGGGTAAAGGTTTGCTAAACTGGTCATTC
CTATCTGTCACGACCTACATATCAGTGAGAGTGAACAGGCCTCGGTGGCA
TCGCTCATCAAGCTTGGTAGCTTGATTACCGGGCTAGCCAACGATTATGA
AAGTTTTTATAGAGACTTCGAGGAGCATGCCACAAGTGGAAGTCTTGATG
TCATACCCAATGCAATGGCTGTCCTGATGGCCAACTATGACTACACGGAG
GAAGAAGCAAATAACATTCTGAGAAGAGAAATTCTGTCGCTCGAGCGACA
ATTTCTTACAAATTACGATGATTGGAAAGCTTCTCCGGCCTTTAAGTCAG
CTGACCTGCGTGCATACATGGCCCTCTGGGTCACCAGTGTTGGAGGGACA
TGTTATGCCCAGGCTATCTCACCGAGATACCATGGACTTAAGCTGAAAAC
GACTGCAGAAGACCGAGCGCAGCTTGTATGTCGCAACAAGAGAAACTACA
GACTCCATGGTTATCCTCCACCAGCTTCATTTAAGCAAGCTTCAGAGACT
CTCAGAAAAGACAGTACGAATTCTTCAGCCGGAGGCCAGGGGGACATTTT
AGCGCCATTTAAGAAGGCATCAGCGGAGCAGGTAAGAACTTCTTTGGATC
TAGTTCTGACACACTACTGACAACAGAAGCTATGTATGGCTCCGTACGAA
TACACTAGATCAACGCCCGGGAAGTAGACGATTTCAAAATTCATCGAATG
CCTGCGGTCTTGGCTCCACTTGCCGGATGATTCGGCCTCTGTCATAGAGG
ACATCACAAATATGATTTTCCACTCGACCCTCATGTCAGTATAACCCTCG
CTGATCGGCCATTGTATTAGCTCATGCCAGCCAGGATCGACGACATTGAG
GATGACTCAATGCTCCGTCGTGGGAAGCTAGCCGTATATGTAGTGTTTGG
TAAAGCTCAGACTGTCAATAGCGCAACCTATTTATACGCGAAAGCGACTC
GTGACCTAGACCAGCTACAACAGGACGCGTGCAAAGCAGCCTTTCTCGGT
CAGTAACCAAGAAAGCCTACTTCAAACCCTTTCTAAACGTTTGCAGACGA
ACTGGAGACGCTTGCCCTTGGGCAAGCTCTTGATCTTCACTGGAAATTTC
AGAAGACGTGTCCGACAACGGGCGAATATCTTACTATGGTCGATAACAAA
ACTGGGGGGCTCTTCAGGATGACACTACGCCTTCTGGAGATTGAGTCGAA
GGCGGAGCCGTGCCCTGATCTTATGCAACTCATAACGCTGATGGGAAGAT
ACTACCAAATCCGAGATGACTACTTGAATCTGACGTCAGATGAGGTATGT
ACCTAGTAGGATACATTGAGTGAAAGACAGTTCTGACATGACATAGTATA
CCGGAACAAAAGGTTACTGCGAGGATCTCTCGGAGGGCAAATTGTCCTTC
CCTCTTATCCATGCTTTGCAAAACAGTCCCGAGGCGGATATGCTGCGGGG
GCTGTTGTTCCATCGAGAGAATGGCCATGAGCTGTCGCTAGATATGAAGA
GCTATATTGTCGCTGAGATGAGAAAGGTCGGTAGTCTTGCACATGCTCGA
GAAACTGCATTGCAGCTGTTCGATGCAATGATGGGTACGTTGGAACGAGT
TGAGGCTACCCTTGGTCCCAATAAAAGATTGAAGGCCTTATTGCTATGGT
TAAAGCTGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000006.1:218048..220008-

>CAN33_9665-T1 ID=CAN33_9665-T1|Name=CAN33_9665-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7065bp|location=Sequence derived from alignment at NKJJ01000006.1:218048..220008- (Aspergillus niger FDAARGOS_311)
TATACCGGAACAAAAGGTTACTGCGAGGATCTCTCGGAGGGCAAATTGTC
CTTCCCTCTTATCCATGCTTTGCAAAACAGTCCCGAGGCGGATATGCTGC
GGGGGCTGTTGTTCCATCGAGAGAATGGCCATGAGCTGTCGCTAGATATG
AAGAGCTATATTGTCGCTGAGATGAGAAAGGTCGGTAGTCTTGCACATGC
TCGAGAAACTGCATTGCAGCTGTTCGATGCAATGATGGGTACGTTGGAAC
GAGTTGAGGCTACCCTTGGTCCCAATAAAAGATTGAAGGCCTTATTGCTA
TGGTTAAAGCTGTGAACGAACTGGAGACGCTTGCCCTTGGGCAAGCTCTT
GATCTTCACTGGAAATTTCAGAAGACGTGTCCGACAACGGGCGAATATCT
TACTATGGTCGATAACAAAACTGGGGGGCTCTTCAGGATGACACTACGCC
TTCTGGAGATTGAGTCGAAGGCGGAGCCGTGCCCTGATCTTATGCAACTC
ATAACGCTGATGGGAAGATACTACCAAATCCGAGATGACTACTTGAATCT
GACGTCAGATGAGCTCATGCCAGCCAGGATCGACGACATTGAGGATGACT
CAATGCTCCGTCGTGGGAAGCTAGCCGTATATGTAGTGTTTGGTAAAGCT
CAGACTGTCAATAGCGCAACCTATTTATACGCGAAAGCGACTCGTGACCT
AGACCAGCTACAACAGGACGCGTGCAAAGCAGCCTTTCTCGGTTTGCTAA
ACTGGTCATTCCTATCTGTCACGACCTACATATCAGTGAGAGTGAACAGG
CCTCGGTGGCATCGCTCATCAAGCTTGGTAGCTTGATTACCGGGCTAGCC
AACGATTATGAAAGTTTTTATAGAGACTTCGAGGAGCATGCCACAAGTGG
AAGTCTTGATGTCATACCCAATGCAATGGCTGTCCTGATGGCCAACTATG
ACTACACGGAGGAAGAAGCAAATAACATTCTGAGAAGAGAAATTCTGTCG
CTCGAGCGACAATTTCTTACAAATTACGATGATTGGAAAGCTTCTCCGGC
CTTTAAGTCAGCTGACCTGCGTGCATACATGGCCCTCTGGGTCACCAGTG
TTGGAGGGACATGTTATGCCCAGGCTATCTCACCGAGATACCATGGACTT
AAGCTGAAAACGACTGCAGAAGACCGAGCGCAGCTTATGTCTAGGGTCAA
GACGGGCACCTCAATTGCATGCGATTATAAAACCAATGATATATACTATA
GCGCACTTACAGGAATACTTCCGCAGCTTGGGTGCCGGGATGATGAGCAG
AATACTGTTCTGAAAGAATTCCTGGCGATACTGCGATCTCAGCCGATGCC
CTCTCTCAACCAGATAACATTTGATGCATACAAAGAACACAAAAGTAAAA
GTAATGCTGGAATTATACCGGAACAAAAGGTTACTGCGAGGATCTCTCGG
AGGGCAAATTGTCCTTCCCTCTTATCCATGCTTTGCAAAACAGTCCCGAG
GCGGATATGCTGCGGGGGCTGTTGTTCCATCGAGAGAATGGCCATGAGCT
GTCGCTAGATATGAAGAGCTATATTGTCGCTGAGATGAGAAAGGTCGGTA
GTCTTGCACATGCTCGAGAAACTGCATTGCAGCTGTTCGATGCAATGATG
GGTACGTTGGAACGAGTTGAGGCTACCCTTGGTCCCAATAAAAGATTGAA
GGCCTTATTGCTATGGTTAAAGCTGTGAACGAACTGGAGACGCTTGCCCT
TGGGCAAGCTCTTGATCTTCACTGGAAATTTCAGAAGACGTGTCCGACAA
CGGGCGAATATCTTACTATGGTCGATAACAAAACTGGGGGGCTCTTCAGG
ATGACACTACGCCTTCTGGAGATTGAGTCGAAGGCGGAGCCGTGCCCTGA
TCTTATGCAACTCATAACGCTGATGGGAAGATACTACCAAATCCGAGATG
ACTACTTGAATCTGACGTCAGATGAGCTCATGCCAGCCAGGATCGACGAC
ATTGAGGATGACTCAATGCTCCGTCGTGGGAAGCTAGCCGTATATGTAGT
GTTTGGTAAAGCTCAGACTGTCAATAGCGCAACCTATTTATACGCGAAAG
CGACTCGTGACCTAGACCAGCTACAACAGGACGCGTGCAAAGCAGCCTTT
CTCGGTTTGCTAAACTGGTCATTCCTATCTGTCACGACCTACATATCAGT
GAGAGTGAACAGGCCTCGGTGGCATCGCTCATCAAGCTTGGTAGCTTGAT
TACCGGGCTAGCCAACGATTATGAAAGTTTTTATAGAGACTTCGAGGAGC
ATGCCACAAGTGGAAGTCTTGATGTCATACCCAATGCAATGGCTGTCCTG
ATGGCCAACTATGACTACACGGAGGAAGAAGCAAATAACATTCTGAGAAG
AGAAATTCTGTCGCTCGAGCGACAATTTCTTACAAATTACGATGATTGGA
AAGCTTCTCCGGCCTTTAAGTCAGCTGACCTGCGTGCATACATGGCCCTC
TGGGTCACCAGTGTTGGAGGGACATGTTATGCCCAGGCTATCTCACCGAG
ATACCATGGACTTAAGCTGAAAACGACTGCAGAAGACCGAGCGCAGCTTA
TGTCTAGGGTCAAGACGGGCACCTCAATTGCATGCGATTATAAAACCAAT
GATATATACTATAGCGCACTTACAGGAATACTTCCGCAGCTTGGGTGCCG
GGATGATGAGCAGAATACTGTTCTGAAAGAATTCCTGGCGATACTGCGAT
CTCAGCCGATGCCCTCTCTCAACCAGATAACATTTGATGCATACAAAGAA
CACAAAAGTAAAAGTAATGCTGGAATTATACCGGAACAAAAGGTTACTGC
GAGGATCTCTCGGAGGGCAAATTGTCCTTCCCTCTTATCCATGCTTTGCA
AAACAGTCCCGAGGCGGATATGCTGCGGGGGCTGTTGTTCCATCGAGAGA
ATGGCCATGAGCTGTCGCTAGATATGAAGAGCTATATTGTCGCTGAGATG
AGAAAGGTCGGTAGTCTTGCACATGCTCGAGAAACTGCATTGCAGCTGTT
CGATGCAATGATGGGTACGTTGGAACGAGTTGAGGCTACCCTTGGTCCCA
ATAAAAGATTGAAGGCCTTATTGCTATGGTTAAAGCTGTGAACGAACTGG
AGACGCTTGCCCTTGGGCAAGCTCTTGATCTTCACTGGAAATTTCAGAAG
ACGTGTCCGACAACGGGCGAATATCTTACTATGGTCGATAACAAAACTGG
GGGGCTCTTCAGGATGACACTACGCCTTCTGGAGATTGAGTCGAAGGCGG
AGCCGTGCCCTGATCTTATGCAACTCATAACGCTGATGGGAAGATACTAC
CAAATCCGAGATGACTACTTGAATCTGACGTCAGATGAGCTCATGCCAGC
CAGGATCGACGACATTGAGGATGACTCAATGCTCCGTCGTGGGAAGCTAG
CCGTATATGTAGTGTTTGGTAAAGCTCAGACTGTCAATAGCGCAACCTAT
TTATACGCGAAAGCGACTCGTGACCTAGACCAGCTACAACAGGACGCGTG
CAAAGCAGCCTTTCTCGGTTTGCTAAACTGGTCATTCCTATCTGTCACGA
CCTACATATCAGTGAGAGTGAACAGGCCTCGGTGGCATCGCTCATCAAGC
TTGGTAGCTTGATTACCGGGCTAGCCAACGATTATGAAAGTTTTTATAGA
GACTTCGAGGAGCATGCCACAAGTGGAAGTCTTGATGTCATACCCAATGC
AATGGCTGTCCTGATGGCCAACTATGACTACACGGAGGAAGAAGCAAATA
ACATTCTGAGAAGAGAAATTCTGTCGCTCGAGCGACAATTTCTTACAAAT
TACGATGATTGGAAAGCTTCTCCGGCCTTTAAGTCAGCTGACCTGCGTGC
ATACATGGCCCTCTGGGTCACCAGTGTTGGAGGGACATGTTATGCCCAGG
CTATCTCACCGAGATACCATGGACTTAAGCTGAAAACGACTGCAGAAGAC
CGAGCGCAGCTTATGTCTAGGGTCAAGACGGGCACCTCAATTGCATGCGA
TTATAAAACCAATGATATATACTATAGCGCACTTACAGGAATACTTCCGC
AGCTTGGGTGCCGGGATGATGAGCAGAATACTGTTCTGAAAGAATTCCTG
GCGATACTGCGATCTCAGCCGATGCCCTCTCTCAACCAGATAACATTTGA
TGCATACAAAGAACACAAAAGTAAAAGTAATGCTGGAATTATACCGGAAC
AAAAGGTTACTGCGAGGATCTCTCGGAGGGCAAATTGTCCTTCCCTCTTA
TCCATGCTTTGCAAAACAGTCCCGAGGCGGATATGCTGCGGGGGCTGTTG
TTCCATCGAGAGAATGGCCATGAGCTGTCGCTAGATATGAAGAGCTATAT
TGTCGCTGAGATGAGAAAGGTCGGTAGTCTTGCACATGCTCGAGAAACTG
CATTGCAGCTGTTCGATGCAATGATGGGTACGTTGGAACGAGTTGAGGCT
ACCCTTGGTCCCAATAAAAGATTGAAGGCCTTATTGCTATGGTTAAAGCT
GTGAACGAACTGGAGACGCTTGCCCTTGGGCAAGCTCTTGATCTTCACTG
GAAATTTCAGAAGACGTGTCCGACAACGGGCGAATATCTTACTATGGTCG
ATAACAAAACTGGGGGGCTCTTCAGGATGACACTACGCCTTCTGGAGATT
GAGTCGAAGGCGGAGCCGTGCCCTGATCTTATGCAACTCATAACGCTGAT
GGGAAGATACTACCAAATCCGAGATGACTACTTGAATCTGACGTCAGATG
AGCTCATGCCAGCCAGGATCGACGACATTGAGGATGACTCAATGCTCCGT
CGTGGGAAGCTAGCCGTATATGTAGTGTTTGGTAAAGCTCAGACTGTCAA
TAGCGCAACCTATTTATACGCGAAAGCGACTCGTGACCTAGACCAGCTAC
AACAGGACGCGTGCAAAGCAGCCTTTCTCGGTTTGCTAAACTGGTCATTC
CTATCTGTCACGACCTACATATCAGTGAGAGTGAACAGGCCTCGGTGGCA
TCGCTCATCAAGCTTGGTAGCTTGATTACCGGGCTAGCCAACGATTATGA
AAGTTTTTATAGAGACTTCGAGGAGCATGCCACAAGTGGAAGTCTTGATG
TCATACCCAATGCAATGGCTGTCCTGATGGCCAACTATGACTACACGGAG
GAAGAAGCAAATAACATTCTGAGAAGAGAAATTCTGTCGCTCGAGCGACA
ATTTCTTACAAATTACGATGATTGGAAAGCTTCTCCGGCCTTTAAGTCAG
CTGACCTGCGTGCATACATGGCCCTCTGGGTCACCAGTGTTGGAGGGACA
TGTTATGCCCAGGCTATCTCACCGAGATACCATGGACTTAAGCTGAAAAC
GACTGCAGAAGACCGAGCGCAGCTTATGTCTAGGGTCAAGACGGGCACCT
CAATTGCATGCGATTATAAAACCAATGATATATACTATAGCGCACTTACA
GGAATACTTCCGCAGCTTGGGTGCCGGGATGATGAGCAGAATACTGTTCT
GAAAGAATTCCTGGCGATACTGCGATCTCAGCCGATGCCCTCTCTCAACC
AGATAACATTTGATGCATACAAAGAACACAAAAGTAAAAGTAATGCTGGA
ATTATACCGGAACAAAAGGTTACTGCGAGGATCTCTCGGAGGGCAAATTG
TCCTTCCCTCTTATCCATGCTTTGCAAAACAGTCCCGAGGCGGATATGCT
GCGGGGGCTGTTGTTCCATCGAGAGAATGGCCATGAGCTGTCGCTAGATA
TGAAGAGCTATATTGTCGCTGAGATGAGAAAGGTCGGTAGTCTTGCACAT
GCTCGAGAAACTGCATTGCAGCTGTTCGATGCAATGATGGGTACGTTGGA
ACGAGTTGAGGCTACCCTTGGTCCCAATAAAAGATTGAAGGCCTTATTGC
TATGGTTAAAGCTGTGAACGAACTGGAGACGCTTGCCCTTGGGCAAGCTC
TTGATCTTCACTGGAAATTTCAGAAGACGTGTCCGACAACGGGCGAATAT
CTTACTATGGTCGATAACAAAACTGGGGGGCTCTTCAGGATGACACTACG
CCTTCTGGAGATTGAGTCGAAGGCGGAGCCGTGCCCTGATCTTATGCAAC
TCATAACGCTGATGGGAAGATACTACCAAATCCGAGATGACTACTTGAAT
CTGACGTCAGATGAGCTCATGCCAGCCAGGATCGACGACATTGAGGATGA
CTCAATGCTCCGTCGTGGGAAGCTAGCCGTATATGTAGTGTTTGGTAAAG
CTCAGACTGTCAATAGCGCAACCTATTTATACGCGAAAGCGACTCGTGAC
CTAGACCAGCTACAACAGGACGCGTGCAAAGCAGCCTTTCTCGGTTTGCT
AAACTGGTCATTCCTATCTGTCACGACCTACATATCAGTGAGAGTGAACA
GGCCTCGGTGGCATCGCTCATCAAGCTTGGTAGCTTGATTACCGGGCTAG
CCAACGATTATGAAAGTTTTTATAGAGACTTCGAGGAGCATGCCACAAGT
GGAAGTCTTGATGTCATACCCAATGCAATGGCTGTCCTGATGGCCAACTA
TGACTACACGGAGGAAGAAGCAAATAACATTCTGAGAAGAGAAATTCTGT
CGCTCGAGCGACAATTTCTTACAAATTACGATGATTGGAAAGCTTCTCCG
GCCTTTAAGTCAGCTGACCTGCGTGCATACATGGCCCTCTGGGTCACCAG
TGTTGGAGGGACATGTTATGCCCAGGCTATCTCACCGAGATACCATGGAC
TTAAGCTGAAAACGACTGCAGAAGACCGAGCGCAGCTTATGTCTAGGGTC
AAGACGGGCACCTCAATTGCATGCGATTATAAAACCAATGATATATACTA
TAGCGCACTTACAGGAATACTTCCGCAGCTTGGGTGCCGGGATGATGAGC
AGAATACTGTTCTGAAAGAATTCCTGGCGATACTGCGATCTCAGCCGATG
CCCTCTCTCAACCAGATAACATTTGATGCATACAAAGAACACAAAAGTAA
AAGTAATGCTGGAAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_9665CAN33_9665Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9665-T1CAN33_9665-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9665-T1.cdsCAN33_9665-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9665-T1.exon5CAN33_9665-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_9665-T1.exon4CAN33_9665-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_9665-T1.exon3CAN33_9665-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_9665-T1.exon2CAN33_9665-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_9665-T1.exon1CAN33_9665-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR033749
DBxrefInterPro:IPR000092
DBxrefInterPro:IPR008949
DBxrefPFAM:PF00348
ProductPolyprenyl synthetase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000006.1supercontigNKJJ01000006.1:218048..220008 -
Powered by Drupal