You are here

Home

CAN33_9820-T1, CAN33_9820-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9820-T1
Unique NameCAN33_9820-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000006.1:315636..317474+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9820-T1 ID=CAN33_9820-T1|Name=CAN33_9820-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1839bp|location=Sequence derived from alignment at NKJJ01000006.1:315636..317474+ (Aspergillus niger FDAARGOS_311)
ATGGCGGCCTACGAAACGTCGAGTAATCGGAGCCCGCAGGATGCTGAGAA
GAAAGGCGAGCCCATGGAGCGCTGGGCATCTGTGGATGTTGACTACGGTG
CTGAAACCGATCTCAAGCGGAGCTTGTCCACGCGGCATCTGACTATGATT
GCGCTGGGGTCATCGATTGGTATGGGATTATGGCTGGGAAGTGGTGAATC
GCTGGAGAATGGTGGTCCCGCAGCCATCTTCATTGGCTACCTGCTGAGTG
GCACGATGATATGGTCCGTCAGCCACTCCATCGGTGAGATGGCCGTTATG
TATCCTCTGCCATCCGCATTCACTCAGTGGACGGAGATCTTCATCGACAG
ATCGGCGGCCTTCGCGCTGGGCTGGGCGTATTGGTTCTCCTACTTTATCA
CGATCGCAAACGAACTTCAGGTAGGACCTATGTATCTGGGTAGCTGAGAG
TTCTGTGCTGACTGCTTAGGGTATCGTCACGGTCCTCAATTTTTGGACAG
ATAAGGTGCCCATTGCGGCCTGGATCACAATCTTCTGGGTAGTGATCATC
TTCATTAATGTTTTTGCGGTCCGGTTCTTTGGCGAGGTGGAGGTCATTGC
CTCCTCTATCAAGTTTGGATGGATCTTCGTGGTCATTATCTCTCTGATCG
GTTAGTCGCGTGCGCATGATCTCCTTTTCATCGAATCCTCCAACTGACGC
AAACCCATCTCGTGTTTGATAGTGATTTCCGCCGGCGGCGCGCCCGACGA
AGGACCGATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAACGGCT
TCAAAGGCTTCCTGTCCGTCATGCCCACCTGCATCTTCGCCATGTCCGGT
TCGGAGAACTCGGCGCTGGTCGCAGCAGAGACAGATAACCCGCGCAAGGC
GGTGCCACGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTCTACG
TCTTGGGATCGCTGATGATCACCATCACGGTGTCACCGAAGGATCCTAAC
CTTTTCGGTGGCAGCGGCGTCAACGCATCGCCATTTGTCATTGCCTATCG
CAACGCGGGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATCTTCA
TCTCTGTGTTGTCCACGGGAAGTATTTCTGCCTATGGTGGTTCGCGGACA
CTGATGGGGTTGACACACTTGAATCTTGCGCCGAAGGTTGGTCTTCGCTC
CCTCTCAATAGTATCCAGTTCATCAATTACCTGTCTAAGTCTTGTCACTA
ACTCCTCTGCCTACAAACCTAGATCTTCGGCAAGGCCGACAAATCCGGTC
GCCCCGTCGCCGGACTGGTCATCACGCTTGTCATTGGCGGCGGCTTGGCC
TACCTCAACGTCAACAACAAGGGTTCGACGGTCTTCACCTGGTTCTCGAA
CCTGACCTCCCTCTTCACGCTCTTCGGATGGGGCACCATCTGCCTCTCTC
ACCTCCGTATGCGCTACGCCTGGAAGATCCAAGGGCGCTCCGTCGAAGAC
CTCCCCTGGCGGTCCTGGACCTACCCCTACGGGGCCATCTGGGGCTTGAC
CTGGTGCATTCTGCTGATCATCGCCGAGTTCTATCTCAGTTTGTGGCCAC
TGGGCGGCAATCCCACGGCCAAGGGCTTCTTCGCGAACTATGTCTCGGTG
GTAGCGATCGTGGTGCTGTATATCGGGGCGCGCTGCTACTACCGCGGACG
GTGGTGGGTGGATGCGAGCACGATTGACCTCGATGGCCCTCGGCGGTTCT
ATGCCGATGTGGCGGATGTCGAGGCGAGGCCGGCCAAGACGGGGGTGAAG
AAGTATGCGTCGATGGTGGTGTCGGCTATTCTTGAGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000006.1:315636..317474+

>CAN33_9820-T1 ID=CAN33_9820-T1|Name=CAN33_9820-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6528bp|location=Sequence derived from alignment at NKJJ01000006.1:315636..317474+ (Aspergillus niger FDAARGOS_311)
ATGGCGGCCTACGAAACGTCGAGTAATCGGAGCCCGCAGGATGCTGAGAA
GAAAGGCGAGCCCATGGAGCGCTGGGCATCTGTGGATGTTGACTACGGTG
CTGAAACCGATCTCAAGCGGAGCTTGTCCACGCGGCATCTGACTATGATT
GCGCTGGGGTCATCGATTGGTATGGGATTATGGCTGGGAAGTGGTGAATC
GCTGGAGAATGGTGGTCCCGCAGCCATCTTCATTGGCTACCTGCTGAGTG
GCACGATGATATGGTCCGTCAGCCACTCCATCGGTGAGATGGCCGTTATG
TATCCTCTGCCATCCGCATTCACTCAGTGGACGGAGATCTTCATCGACAG
ATCGGCGGCCTTCGCGCTGGGCTGGGCGTATTGGTTCTCCTACTTTATCA
CGATCGCAAACGAACTTCAGGGTATCGTCACGGTCCTCAATTTTTGGACA
GATAAGGTGCCCATTGCGGCCTGGATCACAATCTTCTGGGTAGTGATCAT
CTTCATTAATGTTTTTGCGGTCCGGTTCTTTGGCGAGGTGGAGGTCATTG
CCTCCTCTATCAAGTTTGGATGGATCTTCGTGGTCATTATCTCTCTGATC
GTGATTTCCGCCGGCGGCGCGCCCGACGAAGGACCGATCGGCTTCCGTTA
CTGGAACTCGATGCCATTTACCAACGGCTTCAAAGGCTTCCTGTCCGTCA
TGCCCACCTGCATCTTCGCCATGTCCGGTTCGGAGAACTCGGCGCTGGTC
GCAGCAGAGACAGATAACCCGCGCAAGGCGGTGCCACGCGCCGTGAGCTC
GATCTGGTTGCGTCTATCGCTGTTCTACGTCTTGGGATCGCTGATGATCA
CCATCACGGTGTCACCGAAGGATCCTAACCTTTTCGGTGGCAGCGGCGTC
AACGCATCGCCATTTGTCATTGCCTATCGCAACGCGGGTCTTGCTCCATT
GGCACACATCATGAATGCGGTGATCTTCATCTCTGTGTTGTCCACGGGAA
GTATTTCTGCCTATGGTGGTTCGCGGACACTGATGGGGTTGACACACTTG
AATCTTGCGCCGAAGATCTTCGGCAAGGCCGACAAATCCGGTCGCCCCGT
CGCCGGACTGGTCATCACGCTTGTCATTGGCGGCGGCTTGGCCTACCTCA
ACGTCAACAACAAGGGTTCGACGGTCTTCACCTGGTTCTCGAACCTGACC
TCCCTCTTCACGCTCTTCGGATGGGGCACCATCTGCCTCTCTCACCTCCG
TATGCGCTACGCCTGGAAGATCCAAGGGCGCTCCGTCGAAGACCTCCCCT
GGCGGTCCTGGACCTACCCCTACGGGGCCATCTGGGGCTTGACCTGGTGC
ATTCTGCTGATCATCGCCGAGTTCTATCTCAGTTTGTGGCCACTGGGCGG
CAATCCCACGGCCAAGGGCTTCTTCGCGAACTATGTCTCGGTGGTAGCGA
TCGTGGTGCTGTATATCGGGGCGCGCTGCTACTACCGCGGACGGTGGTGG
GTGGATGCGAGCACGATTGACCTCGATGGCCCTCGGCGGTTCTATGCCGA
TGTGGCGGATGTCGAGGCGAGGCCGGCCAAGACGGGGGTGAAGAAGTATG
CGTCGATGGTGGTGTCGGCTATTCTTGAGTAGATGGCGGCCTACGAAACG
TCGAGTAATCGGAGCCCGCAGGATGCTGAGAAGAAAGGCGAGCCCATGGA
GCGCTGGGCATCTGTGGATGTTGACTACGGTGCTGAAACCGATCTCAAGC
GGAGCTTGTCCACGCGGCATCTGACTATGATTGCGCTGGGGTCATCGATT
GGTATGGGATTATGGCTGGGAAGTGGTGAATCGCTGGAGAATGGTGGTCC
CGCAGCCATCTTCATTGGCTACCTGCTGAGTGGCACGATGATATGGTCCG
TCAGCCACTCCATCGGTGAGATGGCCGTTATGTATCCTCTGCCATCCGCA
TTCACTCAGTGGACGGAGATCTTCATCGACAGATCGGCGGCCTTCGCGCT
GGGCTGGGCGTATTGGTTCTCCTACTTTATCACGATCGCAAACGAACTTC
AGGGTATCGTCACGGTCCTCAATTTTTGGACAGATAAGGTGCCCATTGCG
GCCTGGATCACAATCTTCTGGGTAGTGATCATCTTCATTAATGTTTTTGC
GGTCCGGTTCTTTGGCGAGGTGGAGGTCATTGCCTCCTCTATCAAGTTTG
GATGGATCTTCGTGGTCATTATCTCTCTGATCGTGATTTCCGCCGGCGGC
GCGCCCGACGAAGGACCGATCGGCTTCCGTTACTGGAACTCGATGCCATT
TACCAACGGCTTCAAAGGCTTCCTGTCCGTCATGCCCACCTGCATCTTCG
CCATGTCCGGTTCGGAGAACTCGGCGCTGGTCGCAGCAGAGACAGATAAC
CCGCGCAAGGCGGTGCCACGCGCCGTGAGCTCGATCTGGTTGCGTCTATC
GCTGTTCTACGTCTTGGGATCGCTGATGATCACCATCACGGTGTCACCGA
AGGATCCTAACCTTTTCGGTGGCAGCGGCGTCAACGCATCGCCATTTGTC
ATTGCCTATCGCAACGCGGGTCTTGCTCCATTGGCACACATCATGAATGC
GGTGATCTTCATCTCTGTGTTGTCCACGGGAAGTATTTCTGCCTATGGTG
GTTCGCGGACACTGATGGGGTTGACACACTTGAATCTTGCGCCGAAGATC
TTCGGCAAGGCCGACAAATCCGGTCGCCCCGTCGCCGGACTGGTCATCAC
GCTTGTCATTGGCGGCGGCTTGGCCTACCTCAACGTCAACAACAAGGGTT
CGACGGTCTTCACCTGGTTCTCGAACCTGACCTCCCTCTTCACGCTCTTC
GGATGGGGCACCATCTGCCTCTCTCACCTCCGTATGCGCTACGCCTGGAA
GATCCAAGGGCGCTCCGTCGAAGACCTCCCCTGGCGGTCCTGGACCTACC
CCTACGGGGCCATCTGGGGCTTGACCTGGTGCATTCTGCTGATCATCGCC
GAGTTCTATCTCAGTTTGTGGCCACTGGGCGGCAATCCCACGGCCAAGGG
CTTCTTCGCGAACTATGTCTCGGTGGTAGCGATCGTGGTGCTGTATATCG
GGGCGCGCTGCTACTACCGCGGACGGTGGTGGGTGGATGCGAGCACGATT
GACCTCGATGGCCCTCGGCGGTTCTATGCCGATGTGGCGGATGTCGAGGC
GAGGCCGGCCAAGACGGGGGTGAAGAAGTATGCGTCGATGGTGGTGTCGG
CTATTCTTGAGTAGATGGCGGCCTACGAAACGTCGAGTAATCGGAGCCCG
CAGGATGCTGAGAAGAAAGGCGAGCCCATGGAGCGCTGGGCATCTGTGGA
TGTTGACTACGGTGCTGAAACCGATCTCAAGCGGAGCTTGTCCACGCGGC
ATCTGACTATGATTGCGCTGGGGTCATCGATTGGTATGGGATTATGGCTG
GGAAGTGGTGAATCGCTGGAGAATGGTGGTCCCGCAGCCATCTTCATTGG
CTACCTGCTGAGTGGCACGATGATATGGTCCGTCAGCCACTCCATCGGTG
AGATGGCCGTTATGTATCCTCTGCCATCCGCATTCACTCAGTGGACGGAG
ATCTTCATCGACAGATCGGCGGCCTTCGCGCTGGGCTGGGCGTATTGGTT
CTCCTACTTTATCACGATCGCAAACGAACTTCAGGGTATCGTCACGGTCC
TCAATTTTTGGACAGATAAGGTGCCCATTGCGGCCTGGATCACAATCTTC
TGGGTAGTGATCATCTTCATTAATGTTTTTGCGGTCCGGTTCTTTGGCGA
GGTGGAGGTCATTGCCTCCTCTATCAAGTTTGGATGGATCTTCGTGGTCA
TTATCTCTCTGATCGTGATTTCCGCCGGCGGCGCGCCCGACGAAGGACCG
ATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAACGGCTTCAAAGG
CTTCCTGTCCGTCATGCCCACCTGCATCTTCGCCATGTCCGGTTCGGAGA
ACTCGGCGCTGGTCGCAGCAGAGACAGATAACCCGCGCAAGGCGGTGCCA
CGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTCTACGTCTTGGG
ATCGCTGATGATCACCATCACGGTGTCACCGAAGGATCCTAACCTTTTCG
GTGGCAGCGGCGTCAACGCATCGCCATTTGTCATTGCCTATCGCAACGCG
GGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATCTTCATCTCTGT
GTTGTCCACGGGAAGTATTTCTGCCTATGGTGGTTCGCGGACACTGATGG
GGTTGACACACTTGAATCTTGCGCCGAAGATCTTCGGCAAGGCCGACAAA
TCCGGTCGCCCCGTCGCCGGACTGGTCATCACGCTTGTCATTGGCGGCGG
CTTGGCCTACCTCAACGTCAACAACAAGGGTTCGACGGTCTTCACCTGGT
TCTCGAACCTGACCTCCCTCTTCACGCTCTTCGGATGGGGCACCATCTGC
CTCTCTCACCTCCGTATGCGCTACGCCTGGAAGATCCAAGGGCGCTCCGT
CGAAGACCTCCCCTGGCGGTCCTGGACCTACCCCTACGGGGCCATCTGGG
GCTTGACCTGGTGCATTCTGCTGATCATCGCCGAGTTCTATCTCAGTTTG
TGGCCACTGGGCGGCAATCCCACGGCCAAGGGCTTCTTCGCGAACTATGT
CTCGGTGGTAGCGATCGTGGTGCTGTATATCGGGGCGCGCTGCTACTACC
GCGGACGGTGGTGGGTGGATGCGAGCACGATTGACCTCGATGGCCCTCGG
CGGTTCTATGCCGATGTGGCGGATGTCGAGGCGAGGCCGGCCAAGACGGG
GGTGAAGAAGTATGCGTCGATGGTGGTGTCGGCTATTCTTGAGTAGATGG
CGGCCTACGAAACGTCGAGTAATCGGAGCCCGCAGGATGCTGAGAAGAAA
GGCGAGCCCATGGAGCGCTGGGCATCTGTGGATGTTGACTACGGTGCTGA
AACCGATCTCAAGCGGAGCTTGTCCACGCGGCATCTGACTATGATTGCGC
TGGGGTCATCGATTGGTATGGGATTATGGCTGGGAAGTGGTGAATCGCTG
GAGAATGGTGGTCCCGCAGCCATCTTCATTGGCTACCTGCTGAGTGGCAC
GATGATATGGTCCGTCAGCCACTCCATCGGTGAGATGGCCGTTATGTATC
CTCTGCCATCCGCATTCACTCAGTGGACGGAGATCTTCATCGACAGATCG
GCGGCCTTCGCGCTGGGCTGGGCGTATTGGTTCTCCTACTTTATCACGAT
CGCAAACGAACTTCAGGGTATCGTCACGGTCCTCAATTTTTGGACAGATA
AGGTGCCCATTGCGGCCTGGATCACAATCTTCTGGGTAGTGATCATCTTC
ATTAATGTTTTTGCGGTCCGGTTCTTTGGCGAGGTGGAGGTCATTGCCTC
CTCTATCAAGTTTGGATGGATCTTCGTGGTCATTATCTCTCTGATCGTGA
TTTCCGCCGGCGGCGCGCCCGACGAAGGACCGATCGGCTTCCGTTACTGG
AACTCGATGCCATTTACCAACGGCTTCAAAGGCTTCCTGTCCGTCATGCC
CACCTGCATCTTCGCCATGTCCGGTTCGGAGAACTCGGCGCTGGTCGCAG
CAGAGACAGATAACCCGCGCAAGGCGGTGCCACGCGCCGTGAGCTCGATC
TGGTTGCGTCTATCGCTGTTCTACGTCTTGGGATCGCTGATGATCACCAT
CACGGTGTCACCGAAGGATCCTAACCTTTTCGGTGGCAGCGGCGTCAACG
CATCGCCATTTGTCATTGCCTATCGCAACGCGGGTCTTGCTCCATTGGCA
CACATCATGAATGCGGTGATCTTCATCTCTGTGTTGTCCACGGGAAGTAT
TTCTGCCTATGGTGGTTCGCGGACACTGATGGGGTTGACACACTTGAATC
TTGCGCCGAAGATCTTCGGCAAGGCCGACAAATCCGGTCGCCCCGTCGCC
GGACTGGTCATCACGCTTGTCATTGGCGGCGGCTTGGCCTACCTCAACGT
CAACAACAAGGGTTCGACGGTCTTCACCTGGTTCTCGAACCTGACCTCCC
TCTTCACGCTCTTCGGATGGGGCACCATCTGCCTCTCTCACCTCCGTATG
CGCTACGCCTGGAAGATCCAAGGGCGCTCCGTCGAAGACCTCCCCTGGCG
GTCCTGGACCTACCCCTACGGGGCCATCTGGGGCTTGACCTGGTGCATTC
TGCTGATCATCGCCGAGTTCTATCTCAGTTTGTGGCCACTGGGCGGCAAT
CCCACGGCCAAGGGCTTCTTCGCGAACTATGTCTCGGTGGTAGCGATCGT
GGTGCTGTATATCGGGGCGCGCTGCTACTACCGCGGACGGTGGTGGGTGG
ATGCGAGCACGATTGACCTCGATGGCCCTCGGCGGTTCTATGCCGATGTG
GCGGATGTCGAGGCGAGGCCGGCCAAGACGGGGGTGAAGAAGTATGCGTC
GATGGTGGTGTCGGCTATTCTTGAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006865amino acid transport
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_9820CAN33_9820Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9820-T1.exon1CAN33_9820-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_9820-T1.exon2CAN33_9820-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_9820-T1.exon3CAN33_9820-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_9820-T1.exon4CAN33_9820-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9820-T1.cdsCAN33_9820-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9820-T1CAN33_9820-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004840
DBxrefInterPro:IPR002293
DBxrefInterPro:IPR004841
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
ProductAmino acid permease family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000006.1supercontigNKJJ01000006.1:315636..317474 +
Powered by Drupal