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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:379232..381041+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_9945-T1 ID=CAN33_9945-T1|Name=CAN33_9945-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1810bp|location=Sequence derived from alignment at NKJJ01000006.1:379232..381041+ (Aspergillus niger FDAARGOS_311)
ATGTCGGAACCTGTGCGCCCCTGGCCCTACCTCGCTGAAGACATCCGGGA
AGTGACGCACAACGTCCATCCTATGTGGGCTGGTGGGGTTCCAGACCCGT
GGTTCCAGCGCTATACTCGCTTCCCTCTTACTCGCGTGAGAACTATTGTC
CACTATTGTCTACTTGCACCAGGCTGCCGGTGTCACCCCGGACATAAACC
CCCTCTTGCCCCAAGCACGTCGACTGGCCAGTTCAGCGTCTCTATCCGAC
CTCGACTATGCACGAAACAATACGCCCACGACAATGTCTTCCAGCTCCCA
GCACGCCAGGAAATGGTCGACGATGCCGATCGACACGAACGCGGCCCCGT
TCTTGAGCCTCGACTTCGAGGATGAGGTTGTTTACGAGGACGAGCGACGC
CAAAGCATCAAACAGGGGACCATCTGTGGGCTGGTCGAGCAACTGACACG
CCATGATCGACTAGACGTCTCGTTCAACGAGACCTTCCTCATGACCTACC
CTACATTCGTCTGCGGCAGGGAACTCTTTGAGATTCTCCTCCAACGACTT
AACATGCCCCCTCCTCCGGGCCTTACCGACTCTGACCTCTCACGATGGAC
AGAACAGAAGCAGAAGACCGTCCGCTTCCGCGTCATTAACATACTCAAGA
CCTGGCTAGAGCGATACTGGATGGAACCACCCACCGAATCAACTATGGAC
TTCCTCCGCCACATCCACGCTCAAATCCAACCTCTCACCAACGTTCCCAC
CTGCTCGCAACTCCTCACCATCATCGAACACCGCTTGAAGGGCCAAGACA
TCCTCAAACGATACATGACTCCCCCAAACAGCACAGTGCCCAAACCACTC
ACCCCGAGGAACATGAAGAAGCTCAAGTTCCTCGACCTCGATCCGATGGA
GCTCGCCCGCCAACTCACCATCATCGAATCCCGTCTCTTCGCTCGAATCA
AACCTACCGAGTGTCTCAACAAATCATGGCAGAAGAAAGATACCGATAGG
CCGCCATCTGTTCCTGCCTCACGCCGCACCAGCACCAGCACAACCAGTAG
CACCAGCTCCATCGAACGCACCACCGGCGTCAACGCCACGATTCTACACT
CCAACCAGCTCGCAAACTGGGTAGGAGAGATGATCCTGGCCCAGGATGAG
ATGAAGAAGCGTGTCTCGCTGATCAAACAGATTGTCAATATTGCCGATGT
ATGCCCCCCTGCACCCAGCACTATCATCCTACATACTAACATACAGGTGT
GATGACAGAACTGCCGCTCCTTAAGCAACTTCGCAACCATGATGTCCCTC
ATCTCCGGCCTCGCCACAAGCCCTATCTACCGTCTCCACCGCACCTGGAC
GCAAGTGAACCCCAAGACGCGCAAACTCCTCGAAGACATGCAAAGTCTCA
TGTCCAGCGAGAAGAACTTCATCAAGTACCGAGATAAGCTACACGGGGCA
AGCCCACCATGCATTCCCTTCCTCGGTACGTCCCTTCCCCATCACCATTC
ATAACCCAACCCACACTCTCATCCACATACTAACACACCAAACCGTAATA
AAGGAACTTACCTAACCGACCTCACCTTCATTGAAGACGGCATCCCGAGC
CACACCCCACCGCCCAACGTCATGATAAACTTCAGCAAGCGGGTCAAAGT
CGCCGAGATCCTGCGCGAGATTGAGAGCTGCCAGGCCGTCGGGTACAGTT
TGCTTCCTGTCCCGAGATACAGGAGTTTATTGTCCGGAATGTGCAAGCCG
CCGGGGGTGATGTCGAGGGGATGTATGAGAGGAGTTTGGCGCTGGAGCCG
AGGATGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:379232..381041+ >CAN33_9945-T1 ID=CAN33_9945-T1|Name=CAN33_9945-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7680bp|location=Sequence derived from alignment at NKJJ01000006.1:379232..381041+ (Aspergillus niger FDAARGOS_311)
ATGTCGGAACCTGTGCGCCCCTGGCCCTACCTCGCTGAAGACATCCGGGA
AGTGACGCACAACGTCCATCCTATGTGGGCTGGTGGGGTTCCAGACCCGT
GGTTCCAGCGCTATACTCGCTTCCCTCTTACTCGCGCTGCCGGTGTCACC
CCGGACATAAACCCCCTCTTGCCCCAAGCACGTCGACTGGCCAGTTCAGC
GTCTCTATCCGACCTCGACTATGCACGAAACAATACGCCCACGACAATGT
CTTCCAGCTCCCAGCACGCCAGGAAATGGTCGACGATGCCGATCGACACG
AACGCGGCCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTTGTTTACGA
GGACGAGCGACGCCAAAGCATCAAACAGGGGACCATCTGTGGGCTGGTCG
AGCAACTGACACGCCATGATCGACTAGACGTCTCGTTCAACGAGACCTTC
CTCATGACCTACCCTACATTCGTCTGCGGCAGGGAACTCTTTGAGATTCT
CCTCCAACGACTTAACATGCCCCCTCCTCCGGGCCTTACCGACTCTGACC
TCTCACGATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCCGCGTCATT
AACATACTCAAGACCTGGCTAGAGCGATACTGGATGGAACCACCCACCGA
ATCAACTATGGACTTCCTCCGCCACATCCACGCTCAAATCCAACCTCTCA
CCAACGTTCCCACCTGCTCGCAACTCCTCACCATCATCGAACACCGCTTG
AAGGGCCAAGACATCCTCAAACGATACATGACTCCCCCAAACAGCACAGT
GCCCAAACCACTCACCCCGAGGAACATGAAGAAGCTCAAGTTCCTCGACC
TCGATCCGATGGAGCTCGCCCGCCAACTCACCATCATCGAATCCCGTCTC
TTCGCTCGAATCAAACCTACCGAGTGTCTCAACAAATCATGGCAGAAGAA
AGATACCGATAGGCCGCCATCTCTCGCAAACTGGGTAGGAGAGATGATCC
TGGCCCAGGATGAGATGAAGAAGCGTGTCTCGCTGATCAAACAGATTGTC
AATATTGCCGATAACTGCCGCTCCTTAAGCAACTTCGCAACCATGATGTC
CCTCATCTCCGGCCTCGCCACAAGCCCTATCTACCGTCTCCACCGCACCT
GGACGCAAGTGAACCCCAAGACGCGCAAACTCCTCGAAGACATGCAAAGT
CTCATGTCCAGCGAGAAGAACTTCATCAAGTACCGAGATAAGCTACACGG
GGCAAGCCCACCATGCATTCCCTTCCTCGGAACTTACCTAACCGACCTCA
CCTTCATTGAAGACGGCATCCCGAGCCACACCCCACCGCCCAACGTCATG
ATAAACTTCAGCAAGCGGGTCAAAGTCGCCGAGATCCTGCGCGAGATTGA
GAGCTGCCAGGCCGTCGGGTACAGTTTGCTTCCTGTCCCGAGATACAGGA
GTTTATTGTCCGGAATGTGCAAGCCGCCGGGGGTGATGTCGAGGGGATGT
ATGAGAGGAGTTTGGCGCTGGAGCCGAGGATGGTAGATGTCGGAACCTGT
GCGCCCCTGGCCCTACCTCGCTGAAGACATCCGGGAAGTGACGCACAACG
TCCATCCTATGTGGGCTGGTGGGGTTCCAGACCCGTGGTTCCAGCGCTAT
ACTCGCTTCCCTCTTACTCGCGCTGCCGGTGTCACCCCGGACATAAACCC
CCTCTTGCCCCAAGCACGTCGACTGGCCAGTTCAGCGTCTCTATCCGACC
TCGACTATGCACGAAACAATACGCCCACGACAATGTCTTCCAGCTCCCAG
CACGCCAGGAAATGGTCGACGATGCCGATCGACACGAACGCGGCCCCGTT
CTTGAGCCTCGACTTCGAGGATGAGGTTGTTTACGAGGACGAGCGACGCC
AAAGCATCAAACAGGGGACCATCTGTGGGCTGGTCGAGCAACTGACACGC
CATGATCGACTAGACGTCTCGTTCAACGAGACCTTCCTCATGACCTACCC
TACATTCGTCTGCGGCAGGGAACTCTTTGAGATTCTCCTCCAACGACTTA
ACATGCCCCCTCCTCCGGGCCTTACCGACTCTGACCTCTCACGATGGACA
GAACAGAAGCAGAAGACCGTCCGCTTCCGCGTCATTAACATACTCAAGAC
CTGGCTAGAGCGATACTGGATGGAACCACCCACCGAATCAACTATGGACT
TCCTCCGCCACATCCACGCTCAAATCCAACCTCTCACCAACGTTCCCACC
TGCTCGCAACTCCTCACCATCATCGAACACCGCTTGAAGGGCCAAGACAT
CCTCAAACGATACATGACTCCCCCAAACAGCACAGTGCCCAAACCACTCA
CCCCGAGGAACATGAAGAAGCTCAAGTTCCTCGACCTCGATCCGATGGAG
CTCGCCCGCCAACTCACCATCATCGAATCCCGTCTCTTCGCTCGAATCAA
ACCTACCGAGTGTCTCAACAAATCATGGCAGAAGAAAGATACCGATAGGC
CGCCATCTCTCGCAAACTGGGTAGGAGAGATGATCCTGGCCCAGGATGAG
ATGAAGAAGCGTGTCTCGCTGATCAAACAGATTGTCAATATTGCCGATAA
CTGCCGCTCCTTAAGCAACTTCGCAACCATGATGTCCCTCATCTCCGGCC
TCGCCACAAGCCCTATCTACCGTCTCCACCGCACCTGGACGCAAGTGAAC
CCCAAGACGCGCAAACTCCTCGAAGACATGCAAAGTCTCATGTCCAGCGA
GAAGAACTTCATCAAGTACCGAGATAAGCTACACGGGGCAAGCCCACCAT
GCATTCCCTTCCTCGGAACTTACCTAACCGACCTCACCTTCATTGAAGAC
GGCATCCCGAGCCACACCCCACCGCCCAACGTCATGATAAACTTCAGCAA
GCGGGTCAAAGTCGCCGAGATCCTGCGCGAGATTGAGAGCTGCCAGGCCG
TCGGGTACAGTTTGCTTCCTGTCCCGAGATACAGGAGTTTATTGTCCGGA
ATGTGCAAGCCGCCGGGGGTGATGTCGAGGGGATGTATGAGAGGAGTTTG
GCGCTGGAGCCGAGGATGGTAGATGTCGGAACCTGTGCGCCCCTGGCCCT
ACCTCGCTGAAGACATCCGGGAAGTGACGCACAACGTCCATCCTATGTGG
GCTGGTGGGGTTCCAGACCCGTGGTTCCAGCGCTATACTCGCTTCCCTCT
TACTCGCGCTGCCGGTGTCACCCCGGACATAAACCCCCTCTTGCCCCAAG
CACGTCGACTGGCCAGTTCAGCGTCTCTATCCGACCTCGACTATGCACGA
AACAATACGCCCACGACAATGTCTTCCAGCTCCCAGCACGCCAGGAAATG
GTCGACGATGCCGATCGACACGAACGCGGCCCCGTTCTTGAGCCTCGACT
TCGAGGATGAGGTTGTTTACGAGGACGAGCGACGCCAAAGCATCAAACAG
GGGACCATCTGTGGGCTGGTCGAGCAACTGACACGCCATGATCGACTAGA
CGTCTCGTTCAACGAGACCTTCCTCATGACCTACCCTACATTCGTCTGCG
GCAGGGAACTCTTTGAGATTCTCCTCCAACGACTTAACATGCCCCCTCCT
CCGGGCCTTACCGACTCTGACCTCTCACGATGGACAGAACAGAAGCAGAA
GACCGTCCGCTTCCGCGTCATTAACATACTCAAGACCTGGCTAGAGCGAT
ACTGGATGGAACCACCCACCGAATCAACTATGGACTTCCTCCGCCACATC
CACGCTCAAATCCAACCTCTCACCAACGTTCCCACCTGCTCGCAACTCCT
CACCATCATCGAACACCGCTTGAAGGGCCAAGACATCCTCAAACGATACA
TGACTCCCCCAAACAGCACAGTGCCCAAACCACTCACCCCGAGGAACATG
AAGAAGCTCAAGTTCCTCGACCTCGATCCGATGGAGCTCGCCCGCCAACT
CACCATCATCGAATCCCGTCTCTTCGCTCGAATCAAACCTACCGAGTGTC
TCAACAAATCATGGCAGAAGAAAGATACCGATAGGCCGCCATCTCTCGCA
AACTGGGTAGGAGAGATGATCCTGGCCCAGGATGAGATGAAGAAGCGTGT
CTCGCTGATCAAACAGATTGTCAATATTGCCGATAACTGCCGCTCCTTAA
GCAACTTCGCAACCATGATGTCCCTCATCTCCGGCCTCGCCACAAGCCCT
ATCTACCGTCTCCACCGCACCTGGACGCAAGTGAACCCCAAGACGCGCAA
ACTCCTCGAAGACATGCAAAGTCTCATGTCCAGCGAGAAGAACTTCATCA
AGTACCGAGATAAGCTACACGGGGCAAGCCCACCATGCATTCCCTTCCTC
GGAACTTACCTAACCGACCTCACCTTCATTGAAGACGGCATCCCGAGCCA
CACCCCACCGCCCAACGTCATGATAAACTTCAGCAAGCGGGTCAAAGTCG
CCGAGATCCTGCGCGAGATTGAGAGCTGCCAGGCCGTCGGGTACAGTTTG
CTTCCTGTCCCGAGATACAGGAGTTTATTGTCCGGAATGTGCAAGCCGCC
GGGGGTGATGTCGAGGGGATGTATGAGAGGAGTTTGGCGCTGGAGCCGAG
GATGGTAGATGTCGGAACCTGTGCGCCCCTGGCCCTACCTCGCTGAAGAC
ATCCGGGAAGTGACGCACAACGTCCATCCTATGTGGGCTGGTGGGGTTCC
AGACCCGTGGTTCCAGCGCTATACTCGCTTCCCTCTTACTCGCGCTGCCG
GTGTCACCCCGGACATAAACCCCCTCTTGCCCCAAGCACGTCGACTGGCC
AGTTCAGCGTCTCTATCCGACCTCGACTATGCACGAAACAATACGCCCAC
GACAATGTCTTCCAGCTCCCAGCACGCCAGGAAATGGTCGACGATGCCGA
TCGACACGAACGCGGCCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTT
GTTTACGAGGACGAGCGACGCCAAAGCATCAAACAGGGGACCATCTGTGG
GCTGGTCGAGCAACTGACACGCCATGATCGACTAGACGTCTCGTTCAACG
AGACCTTCCTCATGACCTACCCTACATTCGTCTGCGGCAGGGAACTCTTT
GAGATTCTCCTCCAACGACTTAACATGCCCCCTCCTCCGGGCCTTACCGA
CTCTGACCTCTCACGATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCC
GCGTCATTAACATACTCAAGACCTGGCTAGAGCGATACTGGATGGAACCA
CCCACCGAATCAACTATGGACTTCCTCCGCCACATCCACGCTCAAATCCA
ACCTCTCACCAACGTTCCCACCTGCTCGCAACTCCTCACCATCATCGAAC
ACCGCTTGAAGGGCCAAGACATCCTCAAACGATACATGACTCCCCCAAAC
AGCACAGTGCCCAAACCACTCACCCCGAGGAACATGAAGAAGCTCAAGTT
CCTCGACCTCGATCCGATGGAGCTCGCCCGCCAACTCACCATCATCGAAT
CCCGTCTCTTCGCTCGAATCAAACCTACCGAGTGTCTCAACAAATCATGG
CAGAAGAAAGATACCGATAGGCCGCCATCTCTCGCAAACTGGGTAGGAGA
GATGATCCTGGCCCAGGATGAGATGAAGAAGCGTGTCTCGCTGATCAAAC
AGATTGTCAATATTGCCGATAACTGCCGCTCCTTAAGCAACTTCGCAACC
ATGATGTCCCTCATCTCCGGCCTCGCCACAAGCCCTATCTACCGTCTCCA
CCGCACCTGGACGCAAGTGAACCCCAAGACGCGCAAACTCCTCGAAGACA
TGCAAAGTCTCATGTCCAGCGAGAAGAACTTCATCAAGTACCGAGATAAG
CTACACGGGGCAAGCCCACCATGCATTCCCTTCCTCGGAACTTACCTAAC
CGACCTCACCTTCATTGAAGACGGCATCCCGAGCCACACCCCACCGCCCA
ACGTCATGATAAACTTCAGCAAGCGGGTCAAAGTCGCCGAGATCCTGCGC
GAGATTGAGAGCTGCCAGGCCGTCGGGTACAGTTTGCTTCCTGTCCCGAG
ATACAGGAGTTTATTGTCCGGAATGTGCAAGCCGCCGGGGGTGATGTCGA
GGGGATGTATGAGAGGAGTTTGGCGCTGGAGCCGAGGATGGTAGATGTCG
GAACCTGTGCGCCCCTGGCCCTACCTCGCTGAAGACATCCGGGAAGTGAC
GCACAACGTCCATCCTATGTGGGCTGGTGGGGTTCCAGACCCGTGGTTCC
AGCGCTATACTCGCTTCCCTCTTACTCGCGCTGCCGGTGTCACCCCGGAC
ATAAACCCCCTCTTGCCCCAAGCACGTCGACTGGCCAGTTCAGCGTCTCT
ATCCGACCTCGACTATGCACGAAACAATACGCCCACGACAATGTCTTCCA
GCTCCCAGCACGCCAGGAAATGGTCGACGATGCCGATCGACACGAACGCG
GCCCCGTTCTTGAGCCTCGACTTCGAGGATGAGGTTGTTTACGAGGACGA
GCGACGCCAAAGCATCAAACAGGGGACCATCTGTGGGCTGGTCGAGCAAC
TGACACGCCATGATCGACTAGACGTCTCGTTCAACGAGACCTTCCTCATG
ACCTACCCTACATTCGTCTGCGGCAGGGAACTCTTTGAGATTCTCCTCCA
ACGACTTAACATGCCCCCTCCTCCGGGCCTTACCGACTCTGACCTCTCAC
GATGGACAGAACAGAAGCAGAAGACCGTCCGCTTCCGCGTCATTAACATA
CTCAAGACCTGGCTAGAGCGATACTGGATGGAACCACCCACCGAATCAAC
TATGGACTTCCTCCGCCACATCCACGCTCAAATCCAACCTCTCACCAACG
TTCCCACCTGCTCGCAACTCCTCACCATCATCGAACACCGCTTGAAGGGC
CAAGACATCCTCAAACGATACATGACTCCCCCAAACAGCACAGTGCCCAA
ACCACTCACCCCGAGGAACATGAAGAAGCTCAAGTTCCTCGACCTCGATC
CGATGGAGCTCGCCCGCCAACTCACCATCATCGAATCCCGTCTCTTCGCT
CGAATCAAACCTACCGAGTGTCTCAACAAATCATGGCAGAAGAAAGATAC
CGATAGGCCGCCATCTCTCGCAAACTGGGTAGGAGAGATGATCCTGGCCC
AGGATGAGATGAAGAAGCGTGTCTCGCTGATCAAACAGATTGTCAATATT
GCCGATAACTGCCGCTCCTTAAGCAACTTCGCAACCATGATGTCCCTCAT
CTCCGGCCTCGCCACAAGCCCTATCTACCGTCTCCACCGCACCTGGACGC
AAGTGAACCCCAAGACGCGCAAACTCCTCGAAGACATGCAAAGTCTCATG
TCCAGCGAGAAGAACTTCATCAAGTACCGAGATAAGCTACACGGGGCAAG
CCCACCATGCATTCCCTTCCTCGGAACTTACCTAACCGACCTCACCTTCA
TTGAAGACGGCATCCCGAGCCACACCCCACCGCCCAACGTCATGATAAAC
TTCAGCAAGCGGGTCAAAGTCGCCGAGATCCTGCGCGAGATTGAGAGCTG
CCAGGCCGTCGGGTACAGTTTGCTTCCTGTCCCGAGATACAGGAGTTTAT
TGTCCGGAATGTGCAAGCCGCCGGGGGTGATGTCGAGGGGATGTATGAGA
GGAGTTTGGCGCTGGAGCCGAGGATGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0005085 | guanyl-nucleotide exchange factor activity |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0007264 | small GTPase mediated signal transduction |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023578 |
| DBxref | InterPro:IPR019804 |
| DBxref | InterPro:IPR036964 |
| DBxref | InterPro:IPR001895 |
| DBxref | InterPro:IPR000651 |
| DBxref | PFAM:PF00618 |
| DBxref | PFAM:PF00617 |
| Product | RasGEF domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:379232..381041 + |
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