You are here

Home

CAN33_9985-T1, CAN33_9985-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_9985-T1
Unique NameCAN33_9985-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000006.1:395691..396515+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_9985-T1 ID=CAN33_9985-T1|Name=CAN33_9985-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=825bp|location=Sequence derived from alignment at NKJJ01000006.1:395691..396515+ (Aspergillus niger FDAARGOS_311)
ATGGCGCACGAAACCGCGCACTATCAGGAATTCCCCGCCCATGAAAACGA
CCCTCTTCTGGGGCATCGGGGACCTAGCTCCAAACCTTCTCCCCTGAGCC
AACTGCGCCGCCATCTCCGCACCGAAGTCGACCCGCACCGAGCAGACCTT
CTCCTCATTTTCTGCTACGTCATCACGGGTCTCCTGGATAGTTCTGCCGT
TTTCATCTGGGGCTCCTTTGTGAGCATGCAGACCGGCAACACGGTATACT
TTGGACTCGGACTGGCCGGGCTGGACGAGACTCAACGGTGGCTTAAATCG
CTCATCTCGATCGGCAGTTTCTGCATCGGCTCCTTTTTCTTCGCCGTGTT
ACACCGCCTGTTCCACACGCCGCGGCAACGGTCCGCACTGACTCTGTCTT
TTGCACTGCAGATGATTTGTGTCGCTGTCGCTGCGAGTATTGTCACGGTG
CAGCAGACGGGCAAGAGCGATCCTCTGACGTGGAAAATTGGCGTGCCGTT
GGCATTGGTCGCGTTTCAGAGTAGTGGTCAGGCCGTCTCGAGTCGTGTGC
TGAAGTGCAGTAGTTTGACTAGTGTTGTACTTACGAGCATTTATTGTGAT
TTGTTCTCATCGCCGGGACTGACCTCGGTCAGTGTGCTCAAGGCTCCTGA
TGAGTGGAGGCGGTTGGGGGCTGTGGTGGGGATGTTGATTGGAATTGTGG
CGGGGGGCTGGTGGGCGAGGAGTGAGGTTGGATTGCCGGGCGCACTTTGG
ACTGCCGTGGTGTTCAAGGGGTTAATTTGTGTTGCATGGATGTTATGGAA
GACGAAGGATGTTGATGATGAGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000006.1:395691..396515+

>CAN33_9985-T1 ID=CAN33_9985-T1|Name=CAN33_9985-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=825bp|location=Sequence derived from alignment at NKJJ01000006.1:395691..396515+ (Aspergillus niger FDAARGOS_311)
ATGGCGCACGAAACCGCGCACTATCAGGAATTCCCCGCCCATGAAAACGA
CCCTCTTCTGGGGCATCGGGGACCTAGCTCCAAACCTTCTCCCCTGAGCC
AACTGCGCCGCCATCTCCGCACCGAAGTCGACCCGCACCGAGCAGACCTT
CTCCTCATTTTCTGCTACGTCATCACGGGTCTCCTGGATAGTTCTGCCGT
TTTCATCTGGGGCTCCTTTGTGAGCATGCAGACCGGCAACACGGTATACT
TTGGACTCGGACTGGCCGGGCTGGACGAGACTCAACGGTGGCTTAAATCG
CTCATCTCGATCGGCAGTTTCTGCATCGGCTCCTTTTTCTTCGCCGTGTT
ACACCGCCTGTTCCACACGCCGCGGCAACGGTCCGCACTGACTCTGTCTT
TTGCACTGCAGATGATTTGTGTCGCTGTCGCTGCGAGTATTGTCACGGTG
CAGCAGACGGGCAAGAGCGATCCTCTGACGTGGAAAATTGGCGTGCCGTT
GGCATTGGTCGCGTTTCAGAGTAGTGGTCAGGCCGTCTCGAGTCGTGTGC
TGAAGTGCAGTAGTTTGACTAGTGTTGTACTTACGAGCATTTATTGTGAT
TTGTTCTCATCGCCGGGACTGACCTCGGTCAGTGTGCTCAAGGCTCCTGA
TGAGTGGAGGCGGTTGGGGGCTGTGGTGGGGATGTTGATTGGAATTGTGG
CGGGGGGCTGGTGGGCGAGGAGTGAGGTTGGATTGCCGGGCGCACTTTGG
ACTGCCGTGGTGTTCAAGGGGTTAATTTGTGTTGCATGGATGTTATGGAA
GACGAAGGATGTTGATGATGAGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_9985CAN33_9985Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9985-T1.exon1CAN33_9985-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9985-T1.cdsCAN33_9985-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_9985-T1CAN33_9985-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR010699
DBxrefPFAM:PF06912
ProductProtein of unknown function (DUF1275) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000006.1supercontigNKJJ01000006.1:395691..396515 +
Powered by Drupal