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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC12F:25021..26376+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000002-T1 ID=KJC3_000002-T1|Name=KJC3_000002-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1356bp|location=Sequence derived from alignment at JC12F:25021..26376+ (Aspergillus niger KJC3)
GTTCTACTAAACACCCTCTTTAAGGCCCAAACTATAAACGGCCGGCCTCC
AGAGTCACAACAATGGCCTCAGCCGAGAGACCCCAAATTCTTCTTCTCTC
TCTCGCATATCGCGACTTTCTCGATGAAGTCTACTGCACGCTCTTCAGCA
GGCTCTCAGAATTGGCCAATATCAAGCGCGCGAAGACCGCAAACGCCGCG
CTTCAAATAATCGGCGAGACCACCTTCAAAGCAATCATCATAACAGACGA
AGGCCTTGCCGAATCCAATCAAGAGAACCAGGAAGTGCTCGCTAAAATAA
AAGCTTACGTCGAAAATGGCGGGATTGCCATAGTCGGCCTGCACTTCCCC
AACTTCACGCCCATGGATAAGTTCAGGAGGTTCTTCGAGGCCTTTGGCCT
TGCCTGGAAAAATGGCGACTATCATCGCACAACCTTCCGGCTTAATCCAT
CGGTCCTCTTGCCCGAAAGCATTGAGACAGCTTCGTTGCCTGGGCCGTAT
AGCATGAAGGTTCTTCATGTCAAGAACGCTAAGCGTCAGGAAAAGATCTT
TATTCCGATTGAAGGCGCGGTAACTCAAAGTCTTGTTTCCCCTCCGGATT
ATGTGAGTCAGACTCAAGCTGCCGCTGCAGGGGCAAGGCTCGGGTGGGGT
TATCTTGTTTACTGTGGAGATGTTAATGGGGAGGATGGATCAAATCAGCT
TATTTTGGCGCTTTGCGGGTTTTAGGAACAATACAGTCTCATGAATATCA
TGATAGCTAGCGAGGGGAGGGGGCTTGGCAGGAAATGATCAAAGCGCTGA
GTCCACTAATTACGTGATTTCCACTGATTTAATATGAATGAAGGTCTTGC
AATTCTTATTATGGAATTTGATCCATACCATTCCCACCATGCCCGGTTCT
ACTGTCAAGAAGGAATATCAGCGTCGAATCTCAGCGATTAAAGAAGTTAT
GGCTTTCTATGTCGTGGAAGAGGGATCGCCTACTAGACGATCGAGTGTTT
CACAGAAACGGCGTACCGTTAATGCACCGTCATATACGCCCCCTTCAAAG
CGGCAAGAACCGTGTTCGGTGACTAAGAAAGAAACAGAGCTTCAATCGGC
GATTTTCATCAGTTTGCGTCAGATTTCCGGATGAAAGACCCACAATTCGC
TTTCTATGTGTTTCAAATTCCAAGCTCTCAGCAATAGAACAAACCAGAAA
ACATAGTACTCGGGGATCTCTTAGCCGGCACTAATAAACACGTCAAGCAT
TTCCCCCAAGGACATGCGCGTCACGTGCGATATCTGCAGCAAAGAGTTGG
AATATAAGCATGTAATGAATCATGCGTAGATAGTGCACGGAATCGTCTCA
CATCGG back to topCoding sequence (CDS) from alignment at JC12F:25021..26376+ >KJC3_000002-T1 ID=KJC3_000002-T1|Name=KJC3_000002-T1|organism=Aspergillus niger KJC3|type=CDS|length=663bp|location=Sequence derived from alignment at JC12F:25021..26376+ (Aspergillus niger KJC3)
ATGGCCTCAGCCGAGAGACCCCAAATTCTTCTTCTCTCTCTCGCATATCG
CGACTTTCTCGATGAAGTCTACTGCACGCTCTTCAGCAGGCTCTCAGAAT
TGGCCAATATCAAGCGCGCGAAGACCGCAAACGCCGCGCTTCAAATAATC
GGCGAGACCACCTTCAAAGCAATCATCATAACAGACGAAGGCCTTGCCGA
ATCCAATCAAGAGAACCAGGAAGTGCTCGCTAAAATAAAAGCTTACGTCG
AAAATGGCGGGATTGCCATAGTCGGCCTGCACTTCCCCAACTTCACGCCC
ATGGATAAGTTCAGGAGGTTCTTCGAGGCCTTTGGCCTTGCCTGGAAAAA
TGGCGACTATCATCGCACAACCTTCCGGCTTAATCCATCGGTCCTCTTGC
CCGAAAGCATTGAGACAGCTTCGTTGCCTGGGCCGTATAGCATGAAGGTT
CTTCATGTCAAGAACGCTAAGCGTCAGGAAAAGATCTTTATTCCGATTGA
AGGCGCGGTAACTCAAAGTCTTGTTTCCCCTCCGGATTATGTGAGTCAGA
CTCAAGCTGCCGCTGCAGGGGCAAGGCTCGGGTGGGGTTATCTTGTTTAC
TGTGGAGATGTTAATGGGGAGGATGGATCAAATCAGCTTATTTTGGCGCT
TTGCGGGTTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000002-T1.utr5p1 | KJC3_000002-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000002-T1.utr3p1 | KJC3_000002-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC12F | supercontig | JC12F:25021..26376 + |
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