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KJC3_000006-T1, KJC3_000006-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000006-T1
Unique NameKJC3_000006-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC12F:167205..168991-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000006-T1 ID=KJC3_000006-T1|Name=KJC3_000006-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1787bp|location=Sequence derived from alignment at JC12F:167205..168991- (Aspergillus niger KJC3)
CGGGAGATGGATGCAGATATGAGGAGAGGTTGCCTCAACGTAGGTGATGG TCTCCAAGTACCTATTCATGAGATCTATCTAATGGCAAGCCCTAGTACAT AAATGAATATTGTCAGTTCGAGAATGGCTTTGCGTAAGCACCCACTGCCA AAGCCGACGGACCAGTCGGAGGATCTTTTGCAGTATCTTGTGTCCCATCT TGTGCATTGCGATTCGGTGTTCGCGGACGAAAAGCAGCGTCTCTACGCCC TCTCGGGGCTCAATCTGTCCTGCATCTCTGCCAGTCGAGCCGTATCTTTT TTTGACAGGAGACACCGCCTTCAATTTCAGGCAGACGGCACTTTGGTACC ACCTGTAGACACGTCAGCTAAGGTTAGAACGCCTTTGTCTTCCATCGAGG AGGCCCAGTGTGATTCAGGCACCAAAATCAACATGCAAAACGACGATCAT GCAAAAGGAGGCTCGATATCCGAGACGAGCTCGTACTCTGACTCGGAAGT CGATACGGCGAGCGACAGCGATCACCAGTCGGACTGTTCCAGTGTCACAG ATGACGGGTACCTTAACGGGAATGAGGAGACGGGCACTATTCTTTGGCGG CACGTGGAGTTCTATATTGTTCGTAACCCAGTGCCTGGACGTCGCCATAT CTTAGCCGCGATTGTGTCCATCCTGCATACTAAAGGGGAAGGAAGGAAGT TTCGGCTGTAAGTCATTGAGCCACGTGATGTGAGGTGGTGCCACGTACTT ACCCAATCACTAGGAAGAGATATGTTATCGAGCACGAGGATAATTTGATA TTCGATGTGTTATCACAGCTTCTGGCGCTGGCAATACATGATGATATCTT CGAGGCTACTATTCAAGATGTGTCCCATATATACACAGTACCAATTCCTG ATCATCGAAAGGGCATCCAGCTGAAGATAAAGAGAGAAAAGCTGGATGTA TCGGTCTTCCGTGAGCCTGAACGTACCCCCCAGGGCTACAGGACATCTGA TTCGTGCCCTCTGAAGTCCAAGACCTGGAGCCGATATGTCAAACGGATTG GAGTGCGAAGTGGCCAGGAACGTAACCTTACACAGAAGATGTTCCGGCGC GGTGCAATTAATGCCATCAATAGTAAGACCACCTTTGGTACTGCTTATTC TTTATGGCTTATATGAACATCGACTTAGACAGCGCTCCATCCTCGATCCG TGATCAAGTCGCGGATCGAGGATGGAGCGGATAACGAATCTAATGCCGTG AAATACTACCTCAATGAGATAGTCGATTTTGACACAGCGGCAGCGTTTCA CAAACGCCCATCGAACGAGGTCGTTCAACGTGAGCTGAGATCAGCGATCT TGCTGGCAGATAAAACCGTAACTATTGGGTTGACGGCTACCCAGGCTAAG AAAATCACTACAGACCCAGAGGTCTGTCGTCTTCGAAGAGTCTGTCGCGC ATTGACTGCGGAAATTCGCAGCCAGGGCTATAAACGTGTGAAGGATGCCG CAGACACCGAGATTGGTGAGCGGAAGAAACGTGCAGATGCCAAGCTCAAC AGTACACTTACGAGGCTCCGAGAGGAGGAGAGGAGAGGAATCGCCGAAGG CACTTCAGGAAGACAGACACGGCTATTTTCAACCAACAGTACGAGCTCGG TCGGACCTCTCCTGAGGCTAAACTACAGCCTCATGTGGCCCGGACCTACC AAATCCTCGAGCGCAAGGAGCTCGTTGATCTGCTCTGCTATTCAACTCCT ACCAAAACAGACGAAGAAGCTCATCTTCGACGGTTAA
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Coding sequence (CDS) from alignment at JC12F:167205..168991-

>KJC3_000006-T1 ID=KJC3_000006-T1|Name=KJC3_000006-T1|organism=Aspergillus niger KJC3|type=CDS|length=4707bp|location=Sequence derived from alignment at JC12F:167205..168991- (Aspergillus niger KJC3)
CGCTCCATCCTCGATCCGTGATCAAGTCGCGGATCGAGGATGGAGCGGAT
AACGAATCTAATGCCGTGAAATACTACCTCAATGAGATAGTCGATTTTGA
CACAGCGGCAGCGTTTCACAAACGCCCATCGAACGAGGTCGTTCAACGTG
AGCTGAGATCAGCGATCTTGCTGGCAGATAAAACCGTAACTATTGGGTTG
ACGGCTACCCAGGCTAAGAAAATCACTACAGACCCAGAGGTCTGTCGTCT
TCGAAGAGTCTGTCGCGCATTGACTGCGGAAATTCGCAGCCAGGGCTATA
AACGTGTGAAGGATGCCGCAGACACCGAGATTGGTGAGCGGAAGAAACGT
GCAGATGCCAAGCTCAACAGTACACTTACGAGGCTCCGAGAGGAGGAGAG
GAGAGGAATCGCCGAAGGCACTTCAGGAAGACAGACACGGCTATTTTCAA
CCAACAGTACGAGCTCGGTCGGACCTCTCCTGAGGCTAAACTACAGCCTC
ATGTGGCCCGGACCTACCAAATCCTCGAGCGCAAGGAGCTCGTTGATCTG
CTCTGCTATTCAACTCCTACCAAAACAGACGAAGAAGCTCATCTTCGACG
GTTAAGAAGAGATATGTTATCGAGCACGAGGATAATTTGATATTCGATGT
GTTATCACAGCTTCTGGCGCTGGCAATACATGATGATATCTTCGAGGCTA
CTATTCAAGATGTGTCCCATATATACACAGTACCAATTCCTGATCATCGA
AAGGGCATCCAGCTGAAGATAAAGAGAGAAAAGCTGGATGTATCGGTCTT
CCGTGAGCCTGAACGTACCCCCCAGGGCTACAGGACATCTGATTCGTGCC
CTCTGAAGTCCAAGACCTGGAGCCGATATGTCAAACGGATTGGAGTGCGA
AGTGGCCAGGAACGTAACCTTACACAGAAGATGTTCCGGCGCGGTGCAAT
TAATGCCATCAATAATGAATATTGTCAGTTCGAGAATGGCTTTGCGTAAG
CACCCACTGCCAAAGCCGACGGACCAGTCGGAGGATCTTTTGCAGTATCT
TGTGTCCCATCTTGTGCATTGCGATTCGGTGTTCGCGGACGAAAAGCAGC
GTCTCTACGCCCTCTCGGGGCTCAATCTGTCCTGCATCTCTGCCAGTCGA
GCCGTATCTTTTTTTGACAGGAGACACCGCCTTCAATTTCAGGCAGACGG
CACTTTGGTACCACCTGTAGACACGTCAGCTAAGGTTAGAACGCCTTTGT
CTTCCATCGAGGAGGCCCAGTGTGATTCAGGCACCAAAATCAACATGCAA
AACGACGATCATGCAAAAGGAGGCTCGATATCCGAGACGAGCTCGTACTC
TGACTCGGAAGTCGATACGGCGAGCGACAGCGATCACCAGTCGGACTGTT
CCAGTGTCACAGATGACGGGTACCTTAACGGGAATGAGGAGACGGGCACT
ATTCTTTGGCGGCACGTGGAGTTCTATATTGTTCGTAACCCAGTGCCTGG
ACGTCGCCATATCTTAGCCGCGATTGTGTCCATCCTGCATACTAAAGGGG
AAGGAAGGAAGTTTCGGCTCGCTCCATCCTCGATCCGTGATCAAGTCGCG
GATCGAGGATGGAGCGGATAACGAATCTAATGCCGTGAAATACTACCTCA
ATGAGATAGTCGATTTTGACACAGCGGCAGCGTTTCACAAACGCCCATCG
AACGAGGTCGTTCAACGTGAGCTGAGATCAGCGATCTTGCTGGCAGATAA
AACCGTAACTATTGGGTTGACGGCTACCCAGGCTAAGAAAATCACTACAG
ACCCAGAGGTCTGTCGTCTTCGAAGAGTCTGTCGCGCATTGACTGCGGAA
ATTCGCAGCCAGGGCTATAAACGTGTGAAGGATGCCGCAGACACCGAGAT
TGGTGAGCGGAAGAAACGTGCAGATGCCAAGCTCAACAGTACACTTACGA
GGCTCCGAGAGGAGGAGAGGAGAGGAATCGCCGAAGGCACTTCAGGAAGA
CAGACACGGCTATTTTCAACCAACAGTACGAGCTCGGTCGGACCTCTCCT
GAGGCTAAACTACAGCCTCATGTGGCCCGGACCTACCAAATCCTCGAGCG
CAAGGAGCTCGTTGATCTGCTCTGCTATTCAACTCCTACCAAAACAGACG
AAGAAGCTCATCTTCGACGGTTAAGAAGAGATATGTTATCGAGCACGAGG
ATAATTTGATATTCGATGTGTTATCACAGCTTCTGGCGCTGGCAATACAT
GATGATATCTTCGAGGCTACTATTCAAGATGTGTCCCATATATACACAGT
ACCAATTCCTGATCATCGAAAGGGCATCCAGCTGAAGATAAAGAGAGAAA
AGCTGGATGTATCGGTCTTCCGTGAGCCTGAACGTACCCCCCAGGGCTAC
AGGACATCTGATTCGTGCCCTCTGAAGTCCAAGACCTGGAGCCGATATGT
CAAACGGATTGGAGTGCGAAGTGGCCAGGAACGTAACCTTACACAGAAGA
TGTTCCGGCGCGGTGCAATTAATGCCATCAATAATGAATATTGTCAGTTC
GAGAATGGCTTTGCGTAAGCACCCACTGCCAAAGCCGACGGACCAGTCGG
AGGATCTTTTGCAGTATCTTGTGTCCCATCTTGTGCATTGCGATTCGGTG
TTCGCGGACGAAAAGCAGCGTCTCTACGCCCTCTCGGGGCTCAATCTGTC
CTGCATCTCTGCCAGTCGAGCCGTATCTTTTTTTGACAGGAGACACCGCC
TTCAATTTCAGGCAGACGGCACTTTGGTACCACCTGTAGACACGTCAGCT
AAGGTTAGAACGCCTTTGTCTTCCATCGAGGAGGCCCAGTGTGATTCAGG
CACCAAAATCAACATGCAAAACGACGATCATGCAAAAGGAGGCTCGATAT
CCGAGACGAGCTCGTACTCTGACTCGGAAGTCGATACGGCGAGCGACAGC
GATCACCAGTCGGACTGTTCCAGTGTCACAGATGACGGGTACCTTAACGG
GAATGAGGAGACGGGCACTATTCTTTGGCGGCACGTGGAGTTCTATATTG
TTCGTAACCCAGTGCCTGGACGTCGCCATATCTTAGCCGCGATTGTGTCC
ATCCTGCATACTAAAGGGGAAGGAAGGAAGTTTCGGCTCGCTCCATCCTC
GATCCGTGATCAAGTCGCGGATCGAGGATGGAGCGGATAACGAATCTAAT
GCCGTGAAATACTACCTCAATGAGATAGTCGATTTTGACACAGCGGCAGC
GTTTCACAAACGCCCATCGAACGAGGTCGTTCAACGTGAGCTGAGATCAG
CGATCTTGCTGGCAGATAAAACCGTAACTATTGGGTTGACGGCTACCCAG
GCTAAGAAAATCACTACAGACCCAGAGGTCTGTCGTCTTCGAAGAGTCTG
TCGCGCATTGACTGCGGAAATTCGCAGCCAGGGCTATAAACGTGTGAAGG
ATGCCGCAGACACCGAGATTGGTGAGCGGAAGAAACGTGCAGATGCCAAG
CTCAACAGTACACTTACGAGGCTCCGAGAGGAGGAGAGGAGAGGAATCGC
CGAAGGCACTTCAGGAAGACAGACACGGCTATTTTCAACCAACAGTACGA
GCTCGGTCGGACCTCTCCTGAGGCTAAACTACAGCCTCATGTGGCCCGGA
CCTACCAAATCCTCGAGCGCAAGGAGCTCGTTGATCTGCTCTGCTATTCA
ACTCCTACCAAAACAGACGAAGAAGCTCATCTTCGACGGTTAAGAAGAGA
TATGTTATCGAGCACGAGGATAATTTGATATTCGATGTGTTATCACAGCT
TCTGGCGCTGGCAATACATGATGATATCTTCGAGGCTACTATTCAAGATG
TGTCCCATATATACACAGTACCAATTCCTGATCATCGAAAGGGCATCCAG
CTGAAGATAAAGAGAGAAAAGCTGGATGTATCGGTCTTCCGTGAGCCTGA
ACGTACCCCCCAGGGCTACAGGACATCTGATTCGTGCCCTCTGAAGTCCA
AGACCTGGAGCCGATATGTCAAACGGATTGGAGTGCGAAGTGGCCAGGAA
CGTAACCTTACACAGAAGATGTTCCGGCGCGGTGCAATTAATGCCATCAA
TAATGAATATTGTCAGTTCGAGAATGGCTTTGCGTAAGCACCCACTGCCA
AAGCCGACGGACCAGTCGGAGGATCTTTTGCAGTATCTTGTGTCCCATCT
TGTGCATTGCGATTCGGTGTTCGCGGACGAAAAGCAGCGTCTCTACGCCC
TCTCGGGGCTCAATCTGTCCTGCATCTCTGCCAGTCGAGCCGTATCTTTT
TTTGACAGGAGACACCGCCTTCAATTTCAGGCAGACGGCACTTTGGTACC
ACCTGTAGACACGTCAGCTAAGGTTAGAACGCCTTTGTCTTCCATCGAGG
AGGCCCAGTGTGATTCAGGCACCAAAATCAACATGCAAAACGACGATCAT
GCAAAAGGAGGCTCGATATCCGAGACGAGCTCGTACTCTGACTCGGAAGT
CGATACGGCGAGCGACAGCGATCACCAGTCGGACTGTTCCAGTGTCACAG
ATGACGGGTACCTTAACGGGAATGAGGAGACGGGCACTATTCTTTGGCGG
CACGTGGAGTTCTATATTGTTCGTAACCCAGTGCCTGGACGTCGCCATAT
CTTAGCCGCGATTGTGTCCATCCTGCATACTAAAGGGGAAGGAAGGAAGT
TTCGGCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000006KJC3_000006Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000006-T1KJC3_000006-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000006-T1.cdsKJC3_000006-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000006-T1.exon3KJC3_000006-T1.exon3Aspergillus niger KJC3exon
KJC3_000006-T1.exon2KJC3_000006-T1.exon2Aspergillus niger KJC3exon
KJC3_000006-T1.exon1KJC3_000006-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000006-T1.utr5p1KJC3_000006-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021842
DBxrefPFAM:PF11917
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC12FsupercontigJC12F:167205..168991 -