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KJC3_000022-T2, KJC3_000022-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000022-T2
Unique NameKJC3_000022-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC12F:268019..270547-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000022-T2 ID=KJC3_000022-T2|Name=KJC3_000022-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2529bp|location=Sequence derived from alignment at JC12F:268019..270547- (Aspergillus niger KJC3)
TGCGAACCTTCAAGCGAAGAACCAATGTCGTCGAAGGTAGAGACGAACAC TGAATATCCCTATGCTGAGCTGGGACTGGGCGTTCGGGAAGACGCGATGA CGGTTTTTGGCCGCATTGCACAGACACCCTGTACTCAGACTGGGAGGAAG CGGCTTCTCTGTTACGTGTTGGCTGAACTGCACATGAAGAACAAATCCAT CAAACCCCTTGTGCAACGAGTAAGAGCTGTGCTAGGAGATGTCAAATCTC TCGAAAGTAAGATATACAATGCTCTCAGGATTGGCAGACGATGGCGTGCT ATTGTCTCCCGGGTTTCCCGAAAACCAGACAAACCGCTTACTGGAATCCT CCTTGCTCTCGAAAAGGGATACATGTAAGTGGAAAGCTGGAAACGCACGC TTGTCGCTAATCGACCAGTTAGCTGGGAACGTTGCACTGAGTCCGAATTC CAGACTGCTCTTGACAACCTTCCGACTACGTCGGACATATTGCTAAATGC ACAAGAGATGGGTCCATTTGCTAACGCTGTCATAAAAGAAATAAAATGTA AGGTGCATAGCTCTGGGTGCAATGCTATGCTTACGTCTTCACAGCGTATC TTAACTTTCCGGACCATGGAAAATATATGACACAGATTTACAACCGTTAC GAGGGGTGGAATGAACCGGTTTCAGGCCTCGATTCCATGTCCTTAGCCAT AGTCTCCGTGGTTATTCCACATCTGAAGGTCGCCGGGTCCGCTGATTCTG CGCGTCTTACGATTCTGCTGTCATTCCTCGCGGACCACGATATCCCGATT GATCTCCTATATCGTGGGTCGTCCCGTCGCAAGCGATGGACTGAAAACGG GGAGATTATTGAAGCAGATCCAGCCGAATTGGGACTTTCTGAGCATTTGA TACGCGTGTGCGCCCACGACAGACTGACGAACACTTTGTCCGAACTCCAG TCACTTTCAGCTATTGTCTGGACATCCGATTCAAAGTTCAAACTGAGGGA GAGAGAAAGGCAAGAGATACAGGAGAGGCTTCCTACCAGTCTCCGTTCCT TCTGGTGTCTTCAGGCTCTCATTTTCGCATGCCGTTCAGTTCCTTGGAAA TATTTGGAGCATATGTAATTTCACGACAGCCATTCAATCTCTAGTGACTA ACATGTGCACAGGGAAACTGACAAAAGCCTACTTCTGTCTCATATCCGAC ACGCCCTGGAAGGGGCTCGCCGTTGGTGTAACTTTCAGGCCATGACTCGT AAAGTTAGGGTGGATCTCGCTCATAGCCTTATGGAATCTTCGCGTTATTC TGTTATGGAGTGGAAGCAATTCGCAGTCAACCAGGCAAAAGAACTCACCC TTGGCCTAGACGATAGTGATCTGCGTTCACAACTTGCGCAAAGACAATGT CTTCTTCATCGACTCTCTGGTGAAACCGAACCTGCTTTTACTGCCTTGAT GGACGGCTTACCACACAAGACCAACAGAAGGTCACATGCCATATACGGGC ATACCATTCTCCAACGCGCTCTCAATCATATTCAGCTTGATCAACTTGAC AAAGCAATTGCTTCGCTCGCAGAATGGCAGCCGGTTTCCCAGCCACACTC TGCAATGGAACAAGTGGTTCTTTTCCGTCAATACCTTCTAATGGGCAAGA TTTTACGTTATCAAGGTCACTTCACGGCATCTTTACAGTATCTGCAGGGA GCTCAGAACATCACAAATACCGCCAAGGACCTTGTTTTCGTCGAAGATGC AAGTGATCTGGCATGTAACTTGGCCGATACGTATCTCGAGCTCGACGACC CAGCTGTGGCCGAAAGTTGTCTTCGGGCTGCAATGAAACATCAAGTCCCG AAGCAAGCTGCATTAATGATTGCTCTGGCAGAATGTCTTTTCGCGCAGGA GAGGTTCGTGGAGGTGGACGAAATACTCCGCCACATATCACAGTGTCAGT TAAAACTTATGAAGATGGACAAGTTACGGCAGTCTATAGTCCAAGCCAAG TTATCGCACATTCGAACCCAATTCGAAGAAGCCTTCCGCTATTGGACTGA AGCTATGAGTAACCTTAGGCGATTCACCTTGGCTAGCGGTCGCACAACAC GCATAATTCTGCTCTCTCAGTGTCACGTTTTACATTGCCAAGGACTCTAT GATATTGAAAACCGAACCCGGGATCAACTGGATGCTCTTGAAAGATGTGC TGGCATGAGTGGAGCTTCATACTGGGTATCTGGTTTGCGTCATTGGCTGC ACTTCCTAGAGTCATGCAAGCAGTGATGACCAAGTGTGACCCTTTTTGCG AGTCAAGGATAGCCATATATACAACTACGCCACTATAAGGGAAAGCTATG CGCTACCTCTATCTTGTCCGTTATTGGTATAATCTTGCAATTAGTTGCGA TAAATATCTTTTATTTGTGGTATACGTTCTTCAATTTCTTCAATCATAAC GTGAGAACAACTGGGATGCCGGAAACAGGGGAGTATTGACTCGATTCCGG CCGTTCTTAAAAAGAGGACATAATTCTTA
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Coding sequence (CDS) from alignment at JC12F:268019..270547-

>KJC3_000022-T2 ID=KJC3_000022-T2|Name=KJC3_000022-T2|organism=Aspergillus niger KJC3|type=CDS|length=5022bp|location=Sequence derived from alignment at JC12F:268019..270547- (Aspergillus niger KJC3)
GGAAACTGACAAAAGCCTACTTCTGTCTCATATCCGACACGCCCTGGAAG
GGGCTCGCCGTTGGTGTAACTTTCAGGCCATGACTCGTAAAGTTAGGGTG
GATCTCGCTCATAGCCTTATGGAATCTTCGCGTTATTCTGTTATGGAGTG
GAAGCAATTCGCAGTCAACCAGGCAAAAGAACTCACCCTTGGCCTAGACG
ATAGTGATCTGCGTTCACAACTTGCGCAAAGACAATGTCTTCTTCATCGA
CTCTCTGGTGAAACCGAACCTGCTTTTACTGCCTTGATGGACGGCTTACC
ACACAAGACCAACAGAAGGTCACATGCCATATACGGGCATACCATTCTCC
AACGCGCTCTCAATCATATTCAGCTTGATCAACTTGACAAAGCAATTGCT
TCGCTCGCAGAATGGCAGCCGGTTTCCCAGCCACACTCTGCAATGGAACA
AGTGGTTCTTTTCCGTCAATACCTTCTAATGGGCAAGATTTTACGTTATC
AAGGTCACTTCACGGCATCTTTACAGTATCTGCAGGGAGCTCAGAACATC
ACAAATACCGCCAAGGACCTTGTTTTCGTCGAAGATGCAAGTGATCTGGC
ATGTAACTTGGCCGATACGTATCTCGAGCTCGACGACCCAGCTGTGGCCG
AAAGTTGTCTTCGGGCTGCAATGAAACATCAAGTCCCGAAGCAAGCTGCA
TTAATGATTGCTCTGGCAGAATGTCTTTTCGCGCAGGAGAGGTTCGTGGA
GGTGGACGAAATACTCCGCCACATATCACAGTGTCAGTTAAAACTTATGA
AGATGGACAAGTTACGGCAGTCTATAGTCCAAGCCAAGTTATCGCACATT
CGAACCCAATTCGAAGAAGCCTTCCGCTATTGGACTGAAGCTATGAGTAA
CCTTAGGCGATTCACCTTGGCTAGCGGTCGCACAACACGCATAATTCTGC
TCTCTCAGTGTCACGTTTTACATTGCCAAGGACTCTATGATATTGAAAAC
CGAACCCGGGATCAACTGGATGCTCTTGAAAGATGTGCTGGCATGAGTGG
AGCTTCATACTGGGTATCTGGTTTGCGTCATTGGCTGCACTTCCTAGAGT
CATGCAAGCAGTGACGTATCTTAACTTTCCGGACCATGGAAAATATATGA
CACAGATTTACAACCGTTACGAGGGGTGGAATGAACCGGTTTCAGGCCTC
GATTCCATGTCCTTAGCCATAGTCTCCGTGGTTATTCCACATCTGAAGGT
CGCCGGGTCCGCTGATTCTGCGCGTCTTACGATTCTGCTGTCATTCCTCG
CGGACCACGATATCCCGATTGATCTCCTATATCGTGGGTCGTCCCGTCGC
AAGCGATGGACTGAAAACGGGGAGATTATTGAAGCAGATCCAGCCGAATT
GGGACTTTCTGAGCATTTGATACGCGTGTGCGCCCACGACAGACTGACGA
ACACTTTGTCCGAACTCCAGTCACTTTCAGCTATTGTCTGGACATCCGAT
TCAAAGTTCAAACTGAGGGAGAGAGAAAGGCAAGAGATACAGGAGAGGCT
TCCTACCAGTCTCCGTTCCTTCTGGTGTCTTCAGGCTCTCATTTTCGCAT
GCCGTTCAGTTCCTTGGAAATATTTGGAGCATATATGGGTCCATTTGCTA
ACGCTGTCATAAAAGAAATAAAATGGAAACTGACAAAAGCCTACTTCTGT
CTCATATCCGACACGCCCTGGAAGGGGCTCGCCGTTGGTGTAACTTTCAG
GCCATGACTCGTAAAGTTAGGGTGGATCTCGCTCATAGCCTTATGGAATC
TTCGCGTTATTCTGTTATGGAGTGGAAGCAATTCGCAGTCAACCAGGCAA
AAGAACTCACCCTTGGCCTAGACGATAGTGATCTGCGTTCACAACTTGCG
CAAAGACAATGTCTTCTTCATCGACTCTCTGGTGAAACCGAACCTGCTTT
TACTGCCTTGATGGACGGCTTACCACACAAGACCAACAGAAGGTCACATG
CCATATACGGGCATACCATTCTCCAACGCGCTCTCAATCATATTCAGCTT
GATCAACTTGACAAAGCAATTGCTTCGCTCGCAGAATGGCAGCCGGTTTC
CCAGCCACACTCTGCAATGGAACAAGTGGTTCTTTTCCGTCAATACCTTC
TAATGGGCAAGATTTTACGTTATCAAGGTCACTTCACGGCATCTTTACAG
TATCTGCAGGGAGCTCAGAACATCACAAATACCGCCAAGGACCTTGTTTT
CGTCGAAGATGCAAGTGATCTGGCATGTAACTTGGCCGATACGTATCTCG
AGCTCGACGACCCAGCTGTGGCCGAAAGTTGTCTTCGGGCTGCAATGAAA
CATCAAGTCCCGAAGCAAGCTGCATTAATGATTGCTCTGGCAGAATGTCT
TTTCGCGCAGGAGAGGTTCGTGGAGGTGGACGAAATACTCCGCCACATAT
CACAGTGTCAGTTAAAACTTATGAAGATGGACAAGTTACGGCAGTCTATA
GTCCAAGCCAAGTTATCGCACATTCGAACCCAATTCGAAGAAGCCTTCCG
CTATTGGACTGAAGCTATGAGTAACCTTAGGCGATTCACCTTGGCTAGCG
GTCGCACAACACGCATAATTCTGCTCTCTCAGTGTCACGTTTTACATTGC
CAAGGACTCTATGATATTGAAAACCGAACCCGGGATCAACTGGATGCTCT
TGAAAGATGTGCTGGCATGAGTGGAGCTTCATACTGGGTATCTGGTTTGC
GTCATTGGCTGCACTTCCTAGAGTCATGCAAGCAGTGACGTATCTTAACT
TTCCGGACCATGGAAAATATATGACACAGATTTACAACCGTTACGAGGGG
TGGAATGAACCGGTTTCAGGCCTCGATTCCATGTCCTTAGCCATAGTCTC
CGTGGTTATTCCACATCTGAAGGTCGCCGGGTCCGCTGATTCTGCGCGTC
TTACGATTCTGCTGTCATTCCTCGCGGACCACGATATCCCGATTGATCTC
CTATATCGTGGGTCGTCCCGTCGCAAGCGATGGACTGAAAACGGGGAGAT
TATTGAAGCAGATCCAGCCGAATTGGGACTTTCTGAGCATTTGATACGCG
TGTGCGCCCACGACAGACTGACGAACACTTTGTCCGAACTCCAGTCACTT
TCAGCTATTGTCTGGACATCCGATTCAAAGTTCAAACTGAGGGAGAGAGA
AAGGCAAGAGATACAGGAGAGGCTTCCTACCAGTCTCCGTTCCTTCTGGT
GTCTTCAGGCTCTCATTTTCGCATGCCGTTCAGTTCCTTGGAAATATTTG
GAGCATATATGGGTCCATTTGCTAACGCTGTCATAAAAGAAATAAAATGG
AAACTGACAAAAGCCTACTTCTGTCTCATATCCGACACGCCCTGGAAGGG
GCTCGCCGTTGGTGTAACTTTCAGGCCATGACTCGTAAAGTTAGGGTGGA
TCTCGCTCATAGCCTTATGGAATCTTCGCGTTATTCTGTTATGGAGTGGA
AGCAATTCGCAGTCAACCAGGCAAAAGAACTCACCCTTGGCCTAGACGAT
AGTGATCTGCGTTCACAACTTGCGCAAAGACAATGTCTTCTTCATCGACT
CTCTGGTGAAACCGAACCTGCTTTTACTGCCTTGATGGACGGCTTACCAC
ACAAGACCAACAGAAGGTCACATGCCATATACGGGCATACCATTCTCCAA
CGCGCTCTCAATCATATTCAGCTTGATCAACTTGACAAAGCAATTGCTTC
GCTCGCAGAATGGCAGCCGGTTTCCCAGCCACACTCTGCAATGGAACAAG
TGGTTCTTTTCCGTCAATACCTTCTAATGGGCAAGATTTTACGTTATCAA
GGTCACTTCACGGCATCTTTACAGTATCTGCAGGGAGCTCAGAACATCAC
AAATACCGCCAAGGACCTTGTTTTCGTCGAAGATGCAAGTGATCTGGCAT
GTAACTTGGCCGATACGTATCTCGAGCTCGACGACCCAGCTGTGGCCGAA
AGTTGTCTTCGGGCTGCAATGAAACATCAAGTCCCGAAGCAAGCTGCATT
AATGATTGCTCTGGCAGAATGTCTTTTCGCGCAGGAGAGGTTCGTGGAGG
TGGACGAAATACTCCGCCACATATCACAGTGTCAGTTAAAACTTATGAAG
ATGGACAAGTTACGGCAGTCTATAGTCCAAGCCAAGTTATCGCACATTCG
AACCCAATTCGAAGAAGCCTTCCGCTATTGGACTGAAGCTATGAGTAACC
TTAGGCGATTCACCTTGGCTAGCGGTCGCACAACACGCATAATTCTGCTC
TCTCAGTGTCACGTTTTACATTGCCAAGGACTCTATGATATTGAAAACCG
AACCCGGGATCAACTGGATGCTCTTGAAAGATGTGCTGGCATGAGTGGAG
CTTCATACTGGGTATCTGGTTTGCGTCATTGGCTGCACTTCCTAGAGTCA
TGCAAGCAGTGACGTATCTTAACTTTCCGGACCATGGAAAATATATGACA
CAGATTTACAACCGTTACGAGGGGTGGAATGAACCGGTTTCAGGCCTCGA
TTCCATGTCCTTAGCCATAGTCTCCGTGGTTATTCCACATCTGAAGGTCG
CCGGGTCCGCTGATTCTGCGCGTCTTACGATTCTGCTGTCATTCCTCGCG
GACCACGATATCCCGATTGATCTCCTATATCGTGGGTCGTCCCGTCGCAA
GCGATGGACTGAAAACGGGGAGATTATTGAAGCAGATCCAGCCGAATTGG
GACTTTCTGAGCATTTGATACGCGTGTGCGCCCACGACAGACTGACGAAC
ACTTTGTCCGAACTCCAGTCACTTTCAGCTATTGTCTGGACATCCGATTC
AAAGTTCAAACTGAGGGAGAGAGAAAGGCAAGAGATACAGGAGAGGCTTC
CTACCAGTCTCCGTTCCTTCTGGTGTCTTCAGGCTCTCATTTTCGCATGC
CGTTCAGTTCCTTGGAAATATTTGGAGCATATATGGGTCCATTTGCTAAC
GCTGTCATAAAAGAAATAAAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000022KJC3_000022Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000022-T2KJC3_000022-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000022-T2.cdsKJC3_000022-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000022-T2.utr3p1KJC3_000022-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000022-T2.exon4KJC3_000022-T2.exon4Aspergillus niger KJC3exon
KJC3_000022-T2.exon3KJC3_000022-T2.exon3Aspergillus niger KJC3exon
KJC3_000022-T2.exon2KJC3_000022-T2.exon2Aspergillus niger KJC3exon
KJC3_000022-T2.exon1KJC3_000022-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000022-T2.utr5p2KJC3_000022-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000022-T2.utr5p1KJC3_000022-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011990
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC12FsupercontigJC12F:268019..270547 -