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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC12F:268019..270547- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000022-T2 ID=KJC3_000022-T2|Name=KJC3_000022-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2529bp|location=Sequence derived from alignment at JC12F:268019..270547- (Aspergillus niger KJC3) TGCGAACCTTCAAGCGAAGAACCAATGTCGTCGAAGGTAGAGACGAACAC
TGAATATCCCTATGCTGAGCTGGGACTGGGCGTTCGGGAAGACGCGATGA
CGGTTTTTGGCCGCATTGCACAGACACCCTGTACTCAGACTGGGAGGAAG
CGGCTTCTCTGTTACGTGTTGGCTGAACTGCACATGAAGAACAAATCCAT
CAAACCCCTTGTGCAACGAGTAAGAGCTGTGCTAGGAGATGTCAAATCTC
TCGAAAGTAAGATATACAATGCTCTCAGGATTGGCAGACGATGGCGTGCT
ATTGTCTCCCGGGTTTCCCGAAAACCAGACAAACCGCTTACTGGAATCCT
CCTTGCTCTCGAAAAGGGATACATGTAAGTGGAAAGCTGGAAACGCACGC
TTGTCGCTAATCGACCAGTTAGCTGGGAACGTTGCACTGAGTCCGAATTC
CAGACTGCTCTTGACAACCTTCCGACTACGTCGGACATATTGCTAAATGC
ACAAGAGATGGGTCCATTTGCTAACGCTGTCATAAAAGAAATAAAATGTA
AGGTGCATAGCTCTGGGTGCAATGCTATGCTTACGTCTTCACAGCGTATC
TTAACTTTCCGGACCATGGAAAATATATGACACAGATTTACAACCGTTAC
GAGGGGTGGAATGAACCGGTTTCAGGCCTCGATTCCATGTCCTTAGCCAT
AGTCTCCGTGGTTATTCCACATCTGAAGGTCGCCGGGTCCGCTGATTCTG
CGCGTCTTACGATTCTGCTGTCATTCCTCGCGGACCACGATATCCCGATT
GATCTCCTATATCGTGGGTCGTCCCGTCGCAAGCGATGGACTGAAAACGG
GGAGATTATTGAAGCAGATCCAGCCGAATTGGGACTTTCTGAGCATTTGA
TACGCGTGTGCGCCCACGACAGACTGACGAACACTTTGTCCGAACTCCAG
TCACTTTCAGCTATTGTCTGGACATCCGATTCAAAGTTCAAACTGAGGGA
GAGAGAAAGGCAAGAGATACAGGAGAGGCTTCCTACCAGTCTCCGTTCCT
TCTGGTGTCTTCAGGCTCTCATTTTCGCATGCCGTTCAGTTCCTTGGAAA
TATTTGGAGCATATGTAATTTCACGACAGCCATTCAATCTCTAGTGACTA
ACATGTGCACAGGGAAACTGACAAAAGCCTACTTCTGTCTCATATCCGAC
ACGCCCTGGAAGGGGCTCGCCGTTGGTGTAACTTTCAGGCCATGACTCGT
AAAGTTAGGGTGGATCTCGCTCATAGCCTTATGGAATCTTCGCGTTATTC
TGTTATGGAGTGGAAGCAATTCGCAGTCAACCAGGCAAAAGAACTCACCC
TTGGCCTAGACGATAGTGATCTGCGTTCACAACTTGCGCAAAGACAATGT
CTTCTTCATCGACTCTCTGGTGAAACCGAACCTGCTTTTACTGCCTTGAT
GGACGGCTTACCACACAAGACCAACAGAAGGTCACATGCCATATACGGGC
ATACCATTCTCCAACGCGCTCTCAATCATATTCAGCTTGATCAACTTGAC
AAAGCAATTGCTTCGCTCGCAGAATGGCAGCCGGTTTCCCAGCCACACTC
TGCAATGGAACAAGTGGTTCTTTTCCGTCAATACCTTCTAATGGGCAAGA
TTTTACGTTATCAAGGTCACTTCACGGCATCTTTACAGTATCTGCAGGGA
GCTCAGAACATCACAAATACCGCCAAGGACCTTGTTTTCGTCGAAGATGC
AAGTGATCTGGCATGTAACTTGGCCGATACGTATCTCGAGCTCGACGACC
CAGCTGTGGCCGAAAGTTGTCTTCGGGCTGCAATGAAACATCAAGTCCCG
AAGCAAGCTGCATTAATGATTGCTCTGGCAGAATGTCTTTTCGCGCAGGA
GAGGTTCGTGGAGGTGGACGAAATACTCCGCCACATATCACAGTGTCAGT
TAAAACTTATGAAGATGGACAAGTTACGGCAGTCTATAGTCCAAGCCAAG
TTATCGCACATTCGAACCCAATTCGAAGAAGCCTTCCGCTATTGGACTGA
AGCTATGAGTAACCTTAGGCGATTCACCTTGGCTAGCGGTCGCACAACAC
GCATAATTCTGCTCTCTCAGTGTCACGTTTTACATTGCCAAGGACTCTAT
GATATTGAAAACCGAACCCGGGATCAACTGGATGCTCTTGAAAGATGTGC
TGGCATGAGTGGAGCTTCATACTGGGTATCTGGTTTGCGTCATTGGCTGC
ACTTCCTAGAGTCATGCAAGCAGTGATGACCAAGTGTGACCCTTTTTGCG
AGTCAAGGATAGCCATATATACAACTACGCCACTATAAGGGAAAGCTATG
CGCTACCTCTATCTTGTCCGTTATTGGTATAATCTTGCAATTAGTTGCGA
TAAATATCTTTTATTTGTGGTATACGTTCTTCAATTTCTTCAATCATAAC
GTGAGAACAACTGGGATGCCGGAAACAGGGGAGTATTGACTCGATTCCGG
CCGTTCTTAAAAAGAGGACATAATTCTTA back to topCoding sequence (CDS) from alignment at JC12F:268019..270547- >KJC3_000022-T2 ID=KJC3_000022-T2|Name=KJC3_000022-T2|organism=Aspergillus niger KJC3|type=CDS|length=5022bp|location=Sequence derived from alignment at JC12F:268019..270547- (Aspergillus niger KJC3) GGAAACTGACAAAAGCCTACTTCTGTCTCATATCCGACACGCCCTGGAAG GGGCTCGCCGTTGGTGTAACTTTCAGGCCATGACTCGTAAAGTTAGGGTG GATCTCGCTCATAGCCTTATGGAATCTTCGCGTTATTCTGTTATGGAGTG GAAGCAATTCGCAGTCAACCAGGCAAAAGAACTCACCCTTGGCCTAGACG ATAGTGATCTGCGTTCACAACTTGCGCAAAGACAATGTCTTCTTCATCGA CTCTCTGGTGAAACCGAACCTGCTTTTACTGCCTTGATGGACGGCTTACC ACACAAGACCAACAGAAGGTCACATGCCATATACGGGCATACCATTCTCC AACGCGCTCTCAATCATATTCAGCTTGATCAACTTGACAAAGCAATTGCT TCGCTCGCAGAATGGCAGCCGGTTTCCCAGCCACACTCTGCAATGGAACA AGTGGTTCTTTTCCGTCAATACCTTCTAATGGGCAAGATTTTACGTTATC AAGGTCACTTCACGGCATCTTTACAGTATCTGCAGGGAGCTCAGAACATC ACAAATACCGCCAAGGACCTTGTTTTCGTCGAAGATGCAAGTGATCTGGC ATGTAACTTGGCCGATACGTATCTCGAGCTCGACGACCCAGCTGTGGCCG AAAGTTGTCTTCGGGCTGCAATGAAACATCAAGTCCCGAAGCAAGCTGCA TTAATGATTGCTCTGGCAGAATGTCTTTTCGCGCAGGAGAGGTTCGTGGA GGTGGACGAAATACTCCGCCACATATCACAGTGTCAGTTAAAACTTATGA AGATGGACAAGTTACGGCAGTCTATAGTCCAAGCCAAGTTATCGCACATT CGAACCCAATTCGAAGAAGCCTTCCGCTATTGGACTGAAGCTATGAGTAA CCTTAGGCGATTCACCTTGGCTAGCGGTCGCACAACACGCATAATTCTGC TCTCTCAGTGTCACGTTTTACATTGCCAAGGACTCTATGATATTGAAAAC CGAACCCGGGATCAACTGGATGCTCTTGAAAGATGTGCTGGCATGAGTGG AGCTTCATACTGGGTATCTGGTTTGCGTCATTGGCTGCACTTCCTAGAGT CATGCAAGCAGTGACGTATCTTAACTTTCCGGACCATGGAAAATATATGA CACAGATTTACAACCGTTACGAGGGGTGGAATGAACCGGTTTCAGGCCTC GATTCCATGTCCTTAGCCATAGTCTCCGTGGTTATTCCACATCTGAAGGT CGCCGGGTCCGCTGATTCTGCGCGTCTTACGATTCTGCTGTCATTCCTCG CGGACCACGATATCCCGATTGATCTCCTATATCGTGGGTCGTCCCGTCGC AAGCGATGGACTGAAAACGGGGAGATTATTGAAGCAGATCCAGCCGAATT GGGACTTTCTGAGCATTTGATACGCGTGTGCGCCCACGACAGACTGACGA ACACTTTGTCCGAACTCCAGTCACTTTCAGCTATTGTCTGGACATCCGAT TCAAAGTTCAAACTGAGGGAGAGAGAAAGGCAAGAGATACAGGAGAGGCT TCCTACCAGTCTCCGTTCCTTCTGGTGTCTTCAGGCTCTCATTTTCGCAT GCCGTTCAGTTCCTTGGAAATATTTGGAGCATATATGGGTCCATTTGCTA ACGCTGTCATAAAAGAAATAAAATGGAAACTGACAAAAGCCTACTTCTGT CTCATATCCGACACGCCCTGGAAGGGGCTCGCCGTTGGTGTAACTTTCAG GCCATGACTCGTAAAGTTAGGGTGGATCTCGCTCATAGCCTTATGGAATC TTCGCGTTATTCTGTTATGGAGTGGAAGCAATTCGCAGTCAACCAGGCAA AAGAACTCACCCTTGGCCTAGACGATAGTGATCTGCGTTCACAACTTGCG CAAAGACAATGTCTTCTTCATCGACTCTCTGGTGAAACCGAACCTGCTTT TACTGCCTTGATGGACGGCTTACCACACAAGACCAACAGAAGGTCACATG CCATATACGGGCATACCATTCTCCAACGCGCTCTCAATCATATTCAGCTT GATCAACTTGACAAAGCAATTGCTTCGCTCGCAGAATGGCAGCCGGTTTC CCAGCCACACTCTGCAATGGAACAAGTGGTTCTTTTCCGTCAATACCTTC TAATGGGCAAGATTTTACGTTATCAAGGTCACTTCACGGCATCTTTACAG TATCTGCAGGGAGCTCAGAACATCACAAATACCGCCAAGGACCTTGTTTT CGTCGAAGATGCAAGTGATCTGGCATGTAACTTGGCCGATACGTATCTCG AGCTCGACGACCCAGCTGTGGCCGAAAGTTGTCTTCGGGCTGCAATGAAA CATCAAGTCCCGAAGCAAGCTGCATTAATGATTGCTCTGGCAGAATGTCT TTTCGCGCAGGAGAGGTTCGTGGAGGTGGACGAAATACTCCGCCACATAT CACAGTGTCAGTTAAAACTTATGAAGATGGACAAGTTACGGCAGTCTATA GTCCAAGCCAAGTTATCGCACATTCGAACCCAATTCGAAGAAGCCTTCCG CTATTGGACTGAAGCTATGAGTAACCTTAGGCGATTCACCTTGGCTAGCG GTCGCACAACACGCATAATTCTGCTCTCTCAGTGTCACGTTTTACATTGC CAAGGACTCTATGATATTGAAAACCGAACCCGGGATCAACTGGATGCTCT TGAAAGATGTGCTGGCATGAGTGGAGCTTCATACTGGGTATCTGGTTTGC GTCATTGGCTGCACTTCCTAGAGTCATGCAAGCAGTGACGTATCTTAACT TTCCGGACCATGGAAAATATATGACACAGATTTACAACCGTTACGAGGGG TGGAATGAACCGGTTTCAGGCCTCGATTCCATGTCCTTAGCCATAGTCTC CGTGGTTATTCCACATCTGAAGGTCGCCGGGTCCGCTGATTCTGCGCGTC TTACGATTCTGCTGTCATTCCTCGCGGACCACGATATCCCGATTGATCTC CTATATCGTGGGTCGTCCCGTCGCAAGCGATGGACTGAAAACGGGGAGAT TATTGAAGCAGATCCAGCCGAATTGGGACTTTCTGAGCATTTGATACGCG TGTGCGCCCACGACAGACTGACGAACACTTTGTCCGAACTCCAGTCACTT TCAGCTATTGTCTGGACATCCGATTCAAAGTTCAAACTGAGGGAGAGAGA AAGGCAAGAGATACAGGAGAGGCTTCCTACCAGTCTCCGTTCCTTCTGGT GTCTTCAGGCTCTCATTTTCGCATGCCGTTCAGTTCCTTGGAAATATTTG GAGCATATATGGGTCCATTTGCTAACGCTGTCATAAAAGAAATAAAATGG AAACTGACAAAAGCCTACTTCTGTCTCATATCCGACACGCCCTGGAAGGG GCTCGCCGTTGGTGTAACTTTCAGGCCATGACTCGTAAAGTTAGGGTGGA TCTCGCTCATAGCCTTATGGAATCTTCGCGTTATTCTGTTATGGAGTGGA AGCAATTCGCAGTCAACCAGGCAAAAGAACTCACCCTTGGCCTAGACGAT AGTGATCTGCGTTCACAACTTGCGCAAAGACAATGTCTTCTTCATCGACT CTCTGGTGAAACCGAACCTGCTTTTACTGCCTTGATGGACGGCTTACCAC ACAAGACCAACAGAAGGTCACATGCCATATACGGGCATACCATTCTCCAA CGCGCTCTCAATCATATTCAGCTTGATCAACTTGACAAAGCAATTGCTTC GCTCGCAGAATGGCAGCCGGTTTCCCAGCCACACTCTGCAATGGAACAAG TGGTTCTTTTCCGTCAATACCTTCTAATGGGCAAGATTTTACGTTATCAA GGTCACTTCACGGCATCTTTACAGTATCTGCAGGGAGCTCAGAACATCAC AAATACCGCCAAGGACCTTGTTTTCGTCGAAGATGCAAGTGATCTGGCAT GTAACTTGGCCGATACGTATCTCGAGCTCGACGACCCAGCTGTGGCCGAA AGTTGTCTTCGGGCTGCAATGAAACATCAAGTCCCGAAGCAAGCTGCATT AATGATTGCTCTGGCAGAATGTCTTTTCGCGCAGGAGAGGTTCGTGGAGG TGGACGAAATACTCCGCCACATATCACAGTGTCAGTTAAAACTTATGAAG ATGGACAAGTTACGGCAGTCTATAGTCCAAGCCAAGTTATCGCACATTCG AACCCAATTCGAAGAAGCCTTCCGCTATTGGACTGAAGCTATGAGTAACC TTAGGCGATTCACCTTGGCTAGCGGTCGCACAACACGCATAATTCTGCTC TCTCAGTGTCACGTTTTACATTGCCAAGGACTCTATGATATTGAAAACCG AACCCGGGATCAACTGGATGCTCTTGAAAGATGTGCTGGCATGAGTGGAG CTTCATACTGGGTATCTGGTTTGCGTCATTGGCTGCACTTCCTAGAGTCA TGCAAGCAGTGACGTATCTTAACTTTCCGGACCATGGAAAATATATGACA CAGATTTACAACCGTTACGAGGGGTGGAATGAACCGGTTTCAGGCCTCGA TTCCATGTCCTTAGCCATAGTCTCCGTGGTTATTCCACATCTGAAGGTCG CCGGGTCCGCTGATTCTGCGCGTCTTACGATTCTGCTGTCATTCCTCGCG GACCACGATATCCCGATTGATCTCCTATATCGTGGGTCGTCCCGTCGCAA GCGATGGACTGAAAACGGGGAGATTATTGAAGCAGATCCAGCCGAATTGG GACTTTCTGAGCATTTGATACGCGTGTGCGCCCACGACAGACTGACGAAC ACTTTGTCCGAACTCCAGTCACTTTCAGCTATTGTCTGGACATCCGATTC AAAGTTCAAACTGAGGGAGAGAGAAAGGCAAGAGATACAGGAGAGGCTTC CTACCAGTCTCCGTTCCTTCTGGTGTCTTCAGGCTCTCATTTTCGCATGC CGTTCAGTTCCTTGGAAATATTTGGAGCATATATGGGTCCATTTGCTAAC GCTGTCATAAAAGAAATAAAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_000022-T2.utr3p1 | KJC3_000022-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR011990 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
JC12F | supercontig | JC12F:268019..270547 - |
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