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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC12F:268019..270547- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000022-T2 ID=KJC3_000022-T2|Name=KJC3_000022-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2529bp|location=Sequence derived from alignment at JC12F:268019..270547- (Aspergillus niger KJC3)
TGCGAACCTTCAAGCGAAGAACCAATGTCGTCGAAGGTAGAGACGAACAC
TGAATATCCCTATGCTGAGCTGGGACTGGGCGTTCGGGAAGACGCGATGA
CGGTTTTTGGCCGCATTGCACAGACACCCTGTACTCAGACTGGGAGGAAG
CGGCTTCTCTGTTACGTGTTGGCTGAACTGCACATGAAGAACAAATCCAT
CAAACCCCTTGTGCAACGAGTAAGAGCTGTGCTAGGAGATGTCAAATCTC
TCGAAAGTAAGATATACAATGCTCTCAGGATTGGCAGACGATGGCGTGCT
ATTGTCTCCCGGGTTTCCCGAAAACCAGACAAACCGCTTACTGGAATCCT
CCTTGCTCTCGAAAAGGGATACATGTAAGTGGAAAGCTGGAAACGCACGC
TTGTCGCTAATCGACCAGTTAGCTGGGAACGTTGCACTGAGTCCGAATTC
CAGACTGCTCTTGACAACCTTCCGACTACGTCGGACATATTGCTAAATGC
ACAAGAGATGGGTCCATTTGCTAACGCTGTCATAAAAGAAATAAAATGTA
AGGTGCATAGCTCTGGGTGCAATGCTATGCTTACGTCTTCACAGCGTATC
TTAACTTTCCGGACCATGGAAAATATATGACACAGATTTACAACCGTTAC
GAGGGGTGGAATGAACCGGTTTCAGGCCTCGATTCCATGTCCTTAGCCAT
AGTCTCCGTGGTTATTCCACATCTGAAGGTCGCCGGGTCCGCTGATTCTG
CGCGTCTTACGATTCTGCTGTCATTCCTCGCGGACCACGATATCCCGATT
GATCTCCTATATCGTGGGTCGTCCCGTCGCAAGCGATGGACTGAAAACGG
GGAGATTATTGAAGCAGATCCAGCCGAATTGGGACTTTCTGAGCATTTGA
TACGCGTGTGCGCCCACGACAGACTGACGAACACTTTGTCCGAACTCCAG
TCACTTTCAGCTATTGTCTGGACATCCGATTCAAAGTTCAAACTGAGGGA
GAGAGAAAGGCAAGAGATACAGGAGAGGCTTCCTACCAGTCTCCGTTCCT
TCTGGTGTCTTCAGGCTCTCATTTTCGCATGCCGTTCAGTTCCTTGGAAA
TATTTGGAGCATATGTAATTTCACGACAGCCATTCAATCTCTAGTGACTA
ACATGTGCACAGGGAAACTGACAAAAGCCTACTTCTGTCTCATATCCGAC
ACGCCCTGGAAGGGGCTCGCCGTTGGTGTAACTTTCAGGCCATGACTCGT
AAAGTTAGGGTGGATCTCGCTCATAGCCTTATGGAATCTTCGCGTTATTC
TGTTATGGAGTGGAAGCAATTCGCAGTCAACCAGGCAAAAGAACTCACCC
TTGGCCTAGACGATAGTGATCTGCGTTCACAACTTGCGCAAAGACAATGT
CTTCTTCATCGACTCTCTGGTGAAACCGAACCTGCTTTTACTGCCTTGAT
GGACGGCTTACCACACAAGACCAACAGAAGGTCACATGCCATATACGGGC
ATACCATTCTCCAACGCGCTCTCAATCATATTCAGCTTGATCAACTTGAC
AAAGCAATTGCTTCGCTCGCAGAATGGCAGCCGGTTTCCCAGCCACACTC
TGCAATGGAACAAGTGGTTCTTTTCCGTCAATACCTTCTAATGGGCAAGA
TTTTACGTTATCAAGGTCACTTCACGGCATCTTTACAGTATCTGCAGGGA
GCTCAGAACATCACAAATACCGCCAAGGACCTTGTTTTCGTCGAAGATGC
AAGTGATCTGGCATGTAACTTGGCCGATACGTATCTCGAGCTCGACGACC
CAGCTGTGGCCGAAAGTTGTCTTCGGGCTGCAATGAAACATCAAGTCCCG
AAGCAAGCTGCATTAATGATTGCTCTGGCAGAATGTCTTTTCGCGCAGGA
GAGGTTCGTGGAGGTGGACGAAATACTCCGCCACATATCACAGTGTCAGT
TAAAACTTATGAAGATGGACAAGTTACGGCAGTCTATAGTCCAAGCCAAG
TTATCGCACATTCGAACCCAATTCGAAGAAGCCTTCCGCTATTGGACTGA
AGCTATGAGTAACCTTAGGCGATTCACCTTGGCTAGCGGTCGCACAACAC
GCATAATTCTGCTCTCTCAGTGTCACGTTTTACATTGCCAAGGACTCTAT
GATATTGAAAACCGAACCCGGGATCAACTGGATGCTCTTGAAAGATGTGC
TGGCATGAGTGGAGCTTCATACTGGGTATCTGGTTTGCGTCATTGGCTGC
ACTTCCTAGAGTCATGCAAGCAGTGATGACCAAGTGTGACCCTTTTTGCG
AGTCAAGGATAGCCATATATACAACTACGCCACTATAAGGGAAAGCTATG
CGCTACCTCTATCTTGTCCGTTATTGGTATAATCTTGCAATTAGTTGCGA
TAAATATCTTTTATTTGTGGTATACGTTCTTCAATTTCTTCAATCATAAC
GTGAGAACAACTGGGATGCCGGAAACAGGGGAGTATTGACTCGATTCCGG
CCGTTCTTAAAAAGAGGACATAATTCTTA back to topCoding sequence (CDS) from alignment at JC12F:268019..270547- >KJC3_000022-T2 ID=KJC3_000022-T2|Name=KJC3_000022-T2|organism=Aspergillus niger KJC3|type=CDS|length=5022bp|location=Sequence derived from alignment at JC12F:268019..270547- (Aspergillus niger KJC3)
GGAAACTGACAAAAGCCTACTTCTGTCTCATATCCGACACGCCCTGGAAG
GGGCTCGCCGTTGGTGTAACTTTCAGGCCATGACTCGTAAAGTTAGGGTG
GATCTCGCTCATAGCCTTATGGAATCTTCGCGTTATTCTGTTATGGAGTG
GAAGCAATTCGCAGTCAACCAGGCAAAAGAACTCACCCTTGGCCTAGACG
ATAGTGATCTGCGTTCACAACTTGCGCAAAGACAATGTCTTCTTCATCGA
CTCTCTGGTGAAACCGAACCTGCTTTTACTGCCTTGATGGACGGCTTACC
ACACAAGACCAACAGAAGGTCACATGCCATATACGGGCATACCATTCTCC
AACGCGCTCTCAATCATATTCAGCTTGATCAACTTGACAAAGCAATTGCT
TCGCTCGCAGAATGGCAGCCGGTTTCCCAGCCACACTCTGCAATGGAACA
AGTGGTTCTTTTCCGTCAATACCTTCTAATGGGCAAGATTTTACGTTATC
AAGGTCACTTCACGGCATCTTTACAGTATCTGCAGGGAGCTCAGAACATC
ACAAATACCGCCAAGGACCTTGTTTTCGTCGAAGATGCAAGTGATCTGGC
ATGTAACTTGGCCGATACGTATCTCGAGCTCGACGACCCAGCTGTGGCCG
AAAGTTGTCTTCGGGCTGCAATGAAACATCAAGTCCCGAAGCAAGCTGCA
TTAATGATTGCTCTGGCAGAATGTCTTTTCGCGCAGGAGAGGTTCGTGGA
GGTGGACGAAATACTCCGCCACATATCACAGTGTCAGTTAAAACTTATGA
AGATGGACAAGTTACGGCAGTCTATAGTCCAAGCCAAGTTATCGCACATT
CGAACCCAATTCGAAGAAGCCTTCCGCTATTGGACTGAAGCTATGAGTAA
CCTTAGGCGATTCACCTTGGCTAGCGGTCGCACAACACGCATAATTCTGC
TCTCTCAGTGTCACGTTTTACATTGCCAAGGACTCTATGATATTGAAAAC
CGAACCCGGGATCAACTGGATGCTCTTGAAAGATGTGCTGGCATGAGTGG
AGCTTCATACTGGGTATCTGGTTTGCGTCATTGGCTGCACTTCCTAGAGT
CATGCAAGCAGTGACGTATCTTAACTTTCCGGACCATGGAAAATATATGA
CACAGATTTACAACCGTTACGAGGGGTGGAATGAACCGGTTTCAGGCCTC
GATTCCATGTCCTTAGCCATAGTCTCCGTGGTTATTCCACATCTGAAGGT
CGCCGGGTCCGCTGATTCTGCGCGTCTTACGATTCTGCTGTCATTCCTCG
CGGACCACGATATCCCGATTGATCTCCTATATCGTGGGTCGTCCCGTCGC
AAGCGATGGACTGAAAACGGGGAGATTATTGAAGCAGATCCAGCCGAATT
GGGACTTTCTGAGCATTTGATACGCGTGTGCGCCCACGACAGACTGACGA
ACACTTTGTCCGAACTCCAGTCACTTTCAGCTATTGTCTGGACATCCGAT
TCAAAGTTCAAACTGAGGGAGAGAGAAAGGCAAGAGATACAGGAGAGGCT
TCCTACCAGTCTCCGTTCCTTCTGGTGTCTTCAGGCTCTCATTTTCGCAT
GCCGTTCAGTTCCTTGGAAATATTTGGAGCATATATGGGTCCATTTGCTA
ACGCTGTCATAAAAGAAATAAAATGGAAACTGACAAAAGCCTACTTCTGT
CTCATATCCGACACGCCCTGGAAGGGGCTCGCCGTTGGTGTAACTTTCAG
GCCATGACTCGTAAAGTTAGGGTGGATCTCGCTCATAGCCTTATGGAATC
TTCGCGTTATTCTGTTATGGAGTGGAAGCAATTCGCAGTCAACCAGGCAA
AAGAACTCACCCTTGGCCTAGACGATAGTGATCTGCGTTCACAACTTGCG
CAAAGACAATGTCTTCTTCATCGACTCTCTGGTGAAACCGAACCTGCTTT
TACTGCCTTGATGGACGGCTTACCACACAAGACCAACAGAAGGTCACATG
CCATATACGGGCATACCATTCTCCAACGCGCTCTCAATCATATTCAGCTT
GATCAACTTGACAAAGCAATTGCTTCGCTCGCAGAATGGCAGCCGGTTTC
CCAGCCACACTCTGCAATGGAACAAGTGGTTCTTTTCCGTCAATACCTTC
TAATGGGCAAGATTTTACGTTATCAAGGTCACTTCACGGCATCTTTACAG
TATCTGCAGGGAGCTCAGAACATCACAAATACCGCCAAGGACCTTGTTTT
CGTCGAAGATGCAAGTGATCTGGCATGTAACTTGGCCGATACGTATCTCG
AGCTCGACGACCCAGCTGTGGCCGAAAGTTGTCTTCGGGCTGCAATGAAA
CATCAAGTCCCGAAGCAAGCTGCATTAATGATTGCTCTGGCAGAATGTCT
TTTCGCGCAGGAGAGGTTCGTGGAGGTGGACGAAATACTCCGCCACATAT
CACAGTGTCAGTTAAAACTTATGAAGATGGACAAGTTACGGCAGTCTATA
GTCCAAGCCAAGTTATCGCACATTCGAACCCAATTCGAAGAAGCCTTCCG
CTATTGGACTGAAGCTATGAGTAACCTTAGGCGATTCACCTTGGCTAGCG
GTCGCACAACACGCATAATTCTGCTCTCTCAGTGTCACGTTTTACATTGC
CAAGGACTCTATGATATTGAAAACCGAACCCGGGATCAACTGGATGCTCT
TGAAAGATGTGCTGGCATGAGTGGAGCTTCATACTGGGTATCTGGTTTGC
GTCATTGGCTGCACTTCCTAGAGTCATGCAAGCAGTGACGTATCTTAACT
TTCCGGACCATGGAAAATATATGACACAGATTTACAACCGTTACGAGGGG
TGGAATGAACCGGTTTCAGGCCTCGATTCCATGTCCTTAGCCATAGTCTC
CGTGGTTATTCCACATCTGAAGGTCGCCGGGTCCGCTGATTCTGCGCGTC
TTACGATTCTGCTGTCATTCCTCGCGGACCACGATATCCCGATTGATCTC
CTATATCGTGGGTCGTCCCGTCGCAAGCGATGGACTGAAAACGGGGAGAT
TATTGAAGCAGATCCAGCCGAATTGGGACTTTCTGAGCATTTGATACGCG
TGTGCGCCCACGACAGACTGACGAACACTTTGTCCGAACTCCAGTCACTT
TCAGCTATTGTCTGGACATCCGATTCAAAGTTCAAACTGAGGGAGAGAGA
AAGGCAAGAGATACAGGAGAGGCTTCCTACCAGTCTCCGTTCCTTCTGGT
GTCTTCAGGCTCTCATTTTCGCATGCCGTTCAGTTCCTTGGAAATATTTG
GAGCATATATGGGTCCATTTGCTAACGCTGTCATAAAAGAAATAAAATGG
AAACTGACAAAAGCCTACTTCTGTCTCATATCCGACACGCCCTGGAAGGG
GCTCGCCGTTGGTGTAACTTTCAGGCCATGACTCGTAAAGTTAGGGTGGA
TCTCGCTCATAGCCTTATGGAATCTTCGCGTTATTCTGTTATGGAGTGGA
AGCAATTCGCAGTCAACCAGGCAAAAGAACTCACCCTTGGCCTAGACGAT
AGTGATCTGCGTTCACAACTTGCGCAAAGACAATGTCTTCTTCATCGACT
CTCTGGTGAAACCGAACCTGCTTTTACTGCCTTGATGGACGGCTTACCAC
ACAAGACCAACAGAAGGTCACATGCCATATACGGGCATACCATTCTCCAA
CGCGCTCTCAATCATATTCAGCTTGATCAACTTGACAAAGCAATTGCTTC
GCTCGCAGAATGGCAGCCGGTTTCCCAGCCACACTCTGCAATGGAACAAG
TGGTTCTTTTCCGTCAATACCTTCTAATGGGCAAGATTTTACGTTATCAA
GGTCACTTCACGGCATCTTTACAGTATCTGCAGGGAGCTCAGAACATCAC
AAATACCGCCAAGGACCTTGTTTTCGTCGAAGATGCAAGTGATCTGGCAT
GTAACTTGGCCGATACGTATCTCGAGCTCGACGACCCAGCTGTGGCCGAA
AGTTGTCTTCGGGCTGCAATGAAACATCAAGTCCCGAAGCAAGCTGCATT
AATGATTGCTCTGGCAGAATGTCTTTTCGCGCAGGAGAGGTTCGTGGAGG
TGGACGAAATACTCCGCCACATATCACAGTGTCAGTTAAAACTTATGAAG
ATGGACAAGTTACGGCAGTCTATAGTCCAAGCCAAGTTATCGCACATTCG
AACCCAATTCGAAGAAGCCTTCCGCTATTGGACTGAAGCTATGAGTAACC
TTAGGCGATTCACCTTGGCTAGCGGTCGCACAACACGCATAATTCTGCTC
TCTCAGTGTCACGTTTTACATTGCCAAGGACTCTATGATATTGAAAACCG
AACCCGGGATCAACTGGATGCTCTTGAAAGATGTGCTGGCATGAGTGGAG
CTTCATACTGGGTATCTGGTTTGCGTCATTGGCTGCACTTCCTAGAGTCA
TGCAAGCAGTGACGTATCTTAACTTTCCGGACCATGGAAAATATATGACA
CAGATTTACAACCGTTACGAGGGGTGGAATGAACCGGTTTCAGGCCTCGA
TTCCATGTCCTTAGCCATAGTCTCCGTGGTTATTCCACATCTGAAGGTCG
CCGGGTCCGCTGATTCTGCGCGTCTTACGATTCTGCTGTCATTCCTCGCG
GACCACGATATCCCGATTGATCTCCTATATCGTGGGTCGTCCCGTCGCAA
GCGATGGACTGAAAACGGGGAGATTATTGAAGCAGATCCAGCCGAATTGG
GACTTTCTGAGCATTTGATACGCGTGTGCGCCCACGACAGACTGACGAAC
ACTTTGTCCGAACTCCAGTCACTTTCAGCTATTGTCTGGACATCCGATTC
AAAGTTCAAACTGAGGGAGAGAGAAAGGCAAGAGATACAGGAGAGGCTTC
CTACCAGTCTCCGTTCCTTCTGGTGTCTTCAGGCTCTCATTTTCGCATGC
CGTTCAGTTCCTTGGAAATATTTGGAGCATATATGGGTCCATTTGCTAAC
GCTGTCATAAAAGAAATAAAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000022-T2.utr3p1 | KJC3_000022-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC12F | supercontig | JC12F:268019..270547 - |
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