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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC12F:270833..271539+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000023-T1 ID=KJC3_000023-T1|Name=KJC3_000023-T1|organism=Aspergillus niger KJC3|type=mRNA|length=707bp|location=Sequence derived from alignment at JC12F:270833..271539+ (Aspergillus niger KJC3)
CGCTGCCAATATCCGATGAGCTATGTCAATCTGCACTACAGAGGAAACTG
TCTCCTGTCTGGCAGTGAACACAAAACAAATACTCCATGACGCCGACATC
AGTGGTACATTCTTGATTGAGTGGGTACTTGTAACCGATAGCTGGGAGAT
GTGTGTTCCTACGTCCGAAGGTCTTATTCCACTTGAACACGCGAAAGAAG
GGCAGATGATTATTGTGTATATTTCGGATGGCAAGCTGAAACGTTTCCCG
GAAGGAGAGCTGGAGCCGGTACTGCAAAATTCCTGTGTATTGCAGGCGAT
CCTGAAGAGCCCCAAGATCGGTCGTACCTGGATTGTCCAGTAAGTATATG
ACCCTTGCTCGGATATTATATCCACTTTAACATGAGAGTAGTTCCCTAAG
AGCGCCGAGATATCTGTTAGTGTTCCATCAGTGACTGGTGAGACACGGCT
AACATTCTAGAAGATTCGCCCTGCATTCTGCAGTCAGAACAGGCACTCAA
AAGATAGAGACTTGTCGGCCTTGCTGGGAGGAAGTATCAGCTGCTGCCCG
TCGAGAGCTCGAGCCTCAACAAGAGGAGCCCGGGACCAACAGCAGCGACC
ATGCTTGCCACATCCTTAACGATTACCAAAATCAGCTGCGATCTCTAGAT
ATTATTGGCCGGAGGAAATTGAAGGAAGCGAAGCGCAGAGACCAGCTGCC
GGGGTGA back to topCoding sequence (CDS) from alignment at JC12F:270833..271539+ >KJC3_000023-T1 ID=KJC3_000023-T1|Name=KJC3_000023-T1|organism=Aspergillus niger KJC3|type=CDS|length=1755bp|location=Sequence derived from alignment at JC12F:270833..271539+ (Aspergillus niger KJC3)
ATGTCAATCTGCACTACAGAGGAAACTGTCTCCTGTCTGGCAGTGAACAC
AAAACAAATACTCCATGACGCCGACATCAGTGGTACATTCTTGATTGAGT
GGGTACTTGTAACCGATAGCTGGGAGATGTGTGTTCCTACGTCCGAAGGT
CTTATTCCACTTGAACACGCGAAAGAAGGGCAGATGATTATTGTGTATAT
TTCGGATGGCAAGCTGAAACGTTTCCCGGAAGGAGAGCTGGAGCCGGTAC
TGCAAAATTCCTGTGTATTGCAGGCGATCCTGAAGAGCCCCAAGATCGGT
CGTACCTGGATTGTCCATTCCCTAAGAGCGCCGAGATATCTATTCGCCCT
GCATTCTGCAGTCAGAACAGGCACTCAAAAGATAGAGACTTGTCGGCCTT
GCTGGGAGGAAGTATCAGCTGCTGCCCGTCGAGAGCTCGAGCCTCAACAA
GAGGAGCCCGGGACCAACAGCAGCGACCATGCTTGCCACATCCTTAACGA
TTACCAAAATCAGCTGCGATCTCTAGATATTATTGGCCGGAGGAAATTGA
AGGAAGCGAAGCGCAGAGACCAGCTGCCGGGGTGAATGTCAATCTGCACT
ACAGAGGAAACTGTCTCCTGTCTGGCAGTGAACACAAAACAAATACTCCA
TGACGCCGACATCAGTGGTACATTCTTGATTGAGTGGGTACTTGTAACCG
ATAGCTGGGAGATGTGTGTTCCTACGTCCGAAGGTCTTATTCCACTTGAA
CACGCGAAAGAAGGGCAGATGATTATTGTGTATATTTCGGATGGCAAGCT
GAAACGTTTCCCGGAAGGAGAGCTGGAGCCGGTACTGCAAAATTCCTGTG
TATTGCAGGCGATCCTGAAGAGCCCCAAGATCGGTCGTACCTGGATTGTC
CATTCCCTAAGAGCGCCGAGATATCTATTCGCCCTGCATTCTGCAGTCAG
AACAGGCACTCAAAAGATAGAGACTTGTCGGCCTTGCTGGGAGGAAGTAT
CAGCTGCTGCCCGTCGAGAGCTCGAGCCTCAACAAGAGGAGCCCGGGACC
AACAGCAGCGACCATGCTTGCCACATCCTTAACGATTACCAAAATCAGCT
GCGATCTCTAGATATTATTGGCCGGAGGAAATTGAAGGAAGCGAAGCGCA
GAGACCAGCTGCCGGGGTGAATGTCAATCTGCACTACAGAGGAAACTGTC
TCCTGTCTGGCAGTGAACACAAAACAAATACTCCATGACGCCGACATCAG
TGGTACATTCTTGATTGAGTGGGTACTTGTAACCGATAGCTGGGAGATGT
GTGTTCCTACGTCCGAAGGTCTTATTCCACTTGAACACGCGAAAGAAGGG
CAGATGATTATTGTGTATATTTCGGATGGCAAGCTGAAACGTTTCCCGGA
AGGAGAGCTGGAGCCGGTACTGCAAAATTCCTGTGTATTGCAGGCGATCC
TGAAGAGCCCCAAGATCGGTCGTACCTGGATTGTCCATTCCCTAAGAGCG
CCGAGATATCTATTCGCCCTGCATTCTGCAGTCAGAACAGGCACTCAAAA
GATAGAGACTTGTCGGCCTTGCTGGGAGGAAGTATCAGCTGCTGCCCGTC
GAGAGCTCGAGCCTCAACAAGAGGAGCCCGGGACCAACAGCAGCGACCAT
GCTTGCCACATCCTTAACGATTACCAAAATCAGCTGCGATCTCTAGATAT
TATTGGCCGGAGGAAATTGAAGGAAGCGAAGCGCAGAGACCAGCTGCCGG
GGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000023-T1.utr5p1 | KJC3_000023-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC12F | supercontig | JC12F:270833..271539 + |
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