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KJC3_000033-T2, KJC3_000033-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000033-T2
Unique NameKJC3_000033-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC12F:358269..359332+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000033-T2 ID=KJC3_000033-T2|Name=KJC3_000033-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1064bp|location=Sequence derived from alignment at JC12F:358269..359332+ (Aspergillus niger KJC3)
CAGAAATCTGTTGACTAATTGTGGCAAAAGTCATGGCCTGTGATTACCAG
GGCGACTGCTCTAACAGTAAGCATGATCAATTTTGGTCCTCCCGGCATCG
CTGTGATCTGACAAAGAGGCAAAAGTCTTCGAAGATCTCTCGAAAAGCAC
AGAAATCCAACTAAACGATGATCATGCCGTTTTCCATTATTCTGAAGACA
TTTTCTCTAGATTACCGTGGACTATCTTTCAAATGATACAGGAGGCTTGG
CTTAATGATGCAAAGATCAACCTTCACCATGAACGCCGCCTAGTTCGCAA
GAGTGTGTCATGACCAACAACTCAACTGTGTTTCCATAGCTCACTACCAG
ATTCTCAGCACAAATCCGCCACTTAGTCGGAATCCTACTCCGAAGTGATG
CCAAATCTCTACGGTTTATACTTGACCAGCTGAAAATGGACCACTTGTGG
AGGTTTGGAAGAATGGTGGAGCATGTGCTCGATATACGTGATAGACAGGA
TGCATACCATAACTGCCCCTCTGGTACGTGACGATATTCTGGTTATGATT
CGCAGGAGGGCTCACATAGATGTCTGAAATAGACAGCAATAGAACTATTC
CAATCCGGCATCTGCACCTTCCTCTGCTCATCCCTGGCACACACACTTCT
ACGATTTCGGATCAGAGTATAGTCGACCTTGGACAAACTATGCTGAGCGC
TGCCCCAAGCTCGGATATGGATCAACCTAACCAATATTGCACATTCTATA
GCGAGCAATTTAGGAAACTTAGATTCTGGTCACTGGAAACAACAGCCTGG
GCGATTATGGAGTATATTGAGCCGACTAAGGCTTCCACATATCCGTACGG
AGGGAAAGGACCGGGATGGTGGCCACCATATGTGTCTCACCAACGTCCTC
GATACCTCAAAAAAGAAGGTCAGTTCGACTGCCCGGCATTCGTTACCTGC
TCTAACACCCCCAAAGGCACGATTAAGTTATTGCTTTTCTTGTTATGCGA
GTTATACCAGCAGGGGCTTAGAATTAATCCATTGGAAGGATGCTATGCGT
TCAGTGTCACTTGA
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Coding sequence (CDS) from alignment at JC12F:358269..359332+

>KJC3_000033-T2 ID=KJC3_000033-T2|Name=KJC3_000033-T2|organism=Aspergillus niger KJC3|type=CDS|length=2676bp|location=Sequence derived from alignment at JC12F:358269..359332+ (Aspergillus niger KJC3)
ATGATACAGGAGGCTTGGCTTAATGATGCAAAGATCAACCTTCACCATGA
ACGCCGCCTAGTTCGCAAGACACAAATCCGCCACTTAGTCGGAATCCTAC
TCCGAAGTGATGCCAAATCTCTACGGTTTATACTTGACCAGCTGAAAATG
GACCACTTGTGGAGGTTTGGAAGAATGGTGGAGCATGTGCTCGATATACG
TGATAGACAGGATGCATACCATAACTGCCCCTCTGACAGCAATAGAACTA
TTCCAATCCGGCATCTGCACCTTCCTCTGCTCATCCCTGGCACACACACT
TCTACGATTTCGGATCAGAGTATAGTCGACCTTGGACAAACTATGCTGAG
CGCTGCCCCAAGCTCGGATATGGATCAACCTAACCAATATTGCACATTCT
ATAGCGAGCAATTTAGGAAACTTAGATTCTGGTCACTGGAAACAACAGCC
TGGGCGATTATGGAGTATATTGAGCCGACTAAGGCTTCCACATATCCGTA
CGGAGGGAAAGGACCGGGATGGTGGCCACCATATGTGTCTCACCAACGTC
CTCGATACCTCAAAAAAGAAGGCACGATTAAGTTATTGCTTTTCTTGTTA
TGCGAGTTATACCAGCAGGGGCTTAGAATTAATCCATTGGAAGGATGCTA
TGCGTTCAGTGTCACTTGAATGATACAGGAGGCTTGGCTTAATGATGCAA
AGATCAACCTTCACCATGAACGCCGCCTAGTTCGCAAGACACAAATCCGC
CACTTAGTCGGAATCCTACTCCGAAGTGATGCCAAATCTCTACGGTTTAT
ACTTGACCAGCTGAAAATGGACCACTTGTGGAGGTTTGGAAGAATGGTGG
AGCATGTGCTCGATATACGTGATAGACAGGATGCATACCATAACTGCCCC
TCTGACAGCAATAGAACTATTCCAATCCGGCATCTGCACCTTCCTCTGCT
CATCCCTGGCACACACACTTCTACGATTTCGGATCAGAGTATAGTCGACC
TTGGACAAACTATGCTGAGCGCTGCCCCAAGCTCGGATATGGATCAACCT
AACCAATATTGCACATTCTATAGCGAGCAATTTAGGAAACTTAGATTCTG
GTCACTGGAAACAACAGCCTGGGCGATTATGGAGTATATTGAGCCGACTA
AGGCTTCCACATATCCGTACGGAGGGAAAGGACCGGGATGGTGGCCACCA
TATGTGTCTCACCAACGTCCTCGATACCTCAAAAAAGAAGGCACGATTAA
GTTATTGCTTTTCTTGTTATGCGAGTTATACCAGCAGGGGCTTAGAATTA
ATCCATTGGAAGGATGCTATGCGTTCAGTGTCACTTGAATGATACAGGAG
GCTTGGCTTAATGATGCAAAGATCAACCTTCACCATGAACGCCGCCTAGT
TCGCAAGACACAAATCCGCCACTTAGTCGGAATCCTACTCCGAAGTGATG
CCAAATCTCTACGGTTTATACTTGACCAGCTGAAAATGGACCACTTGTGG
AGGTTTGGAAGAATGGTGGAGCATGTGCTCGATATACGTGATAGACAGGA
TGCATACCATAACTGCCCCTCTGACAGCAATAGAACTATTCCAATCCGGC
ATCTGCACCTTCCTCTGCTCATCCCTGGCACACACACTTCTACGATTTCG
GATCAGAGTATAGTCGACCTTGGACAAACTATGCTGAGCGCTGCCCCAAG
CTCGGATATGGATCAACCTAACCAATATTGCACATTCTATAGCGAGCAAT
TTAGGAAACTTAGATTCTGGTCACTGGAAACAACAGCCTGGGCGATTATG
GAGTATATTGAGCCGACTAAGGCTTCCACATATCCGTACGGAGGGAAAGG
ACCGGGATGGTGGCCACCATATGTGTCTCACCAACGTCCTCGATACCTCA
AAAAAGAAGGCACGATTAAGTTATTGCTTTTCTTGTTATGCGAGTTATAC
CAGCAGGGGCTTAGAATTAATCCATTGGAAGGATGCTATGCGTTCAGTGT
CACTTGAATGATACAGGAGGCTTGGCTTAATGATGCAAAGATCAACCTTC
ACCATGAACGCCGCCTAGTTCGCAAGACACAAATCCGCCACTTAGTCGGA
ATCCTACTCCGAAGTGATGCCAAATCTCTACGGTTTATACTTGACCAGCT
GAAAATGGACCACTTGTGGAGGTTTGGAAGAATGGTGGAGCATGTGCTCG
ATATACGTGATAGACAGGATGCATACCATAACTGCCCCTCTGACAGCAAT
AGAACTATTCCAATCCGGCATCTGCACCTTCCTCTGCTCATCCCTGGCAC
ACACACTTCTACGATTTCGGATCAGAGTATAGTCGACCTTGGACAAACTA
TGCTGAGCGCTGCCCCAAGCTCGGATATGGATCAACCTAACCAATATTGC
ACATTCTATAGCGAGCAATTTAGGAAACTTAGATTCTGGTCACTGGAAAC
AACAGCCTGGGCGATTATGGAGTATATTGAGCCGACTAAGGCTTCCACAT
ATCCGTACGGAGGGAAAGGACCGGGATGGTGGCCACCATATGTGTCTCAC
CAACGTCCTCGATACCTCAAAAAAGAAGGCACGATTAAGTTATTGCTTTT
CTTGTTATGCGAGTTATACCAGCAGGGGCTTAGAATTAATCCATTGGAAG
GATGCTATGCGTTCAGTGTCACTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000033KJC3_000033Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000033-T2KJC3_000033-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000033-T2.utr5p1KJC3_000033-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000033-T2.exon1KJC3_000033-T2.exon1Aspergillus niger KJC3exon
KJC3_000033-T2.exon2KJC3_000033-T2.exon2Aspergillus niger KJC3exon
KJC3_000033-T2.exon3KJC3_000033-T2.exon3Aspergillus niger KJC3exon
KJC3_000033-T2.exon4KJC3_000033-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000033-T2.cdsKJC3_000033-T2.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR021264
DBxrefPFAM:PF11001
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC12FsupercontigJC12F:358269..359332 +
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