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KJC3_000040-T1, KJC3_000040-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000040-T1
Unique NameKJC3_000040-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC14F:11339..13413+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000040-T1 ID=KJC3_000040-T1|Name=KJC3_000040-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2075bp|location=Sequence derived from alignment at JC14F:11339..13413+ (Aspergillus niger KJC3)
CTGGAGATGACTGAGAAAGTTCACATCATGGATTGGGAAGCCACAGCTAC
CAGCCACGGATCTACACAGACCGTTAAGCAGGTTTTGCAGGTCGATGATG
CGATTGTCTTTGCAGACCCCCAACGCATAGAGGATCTACGCTCTCTTGAG
CTCGCCGATAGCCCCTTAAACGAGATCTCGAGTAGGCTGGAAGAATATCA
CTCCGTGCTCAATTCTGGCTCTAGCATTGCTCTCGGTCGTGGTGACGCGC
TATTCAGCACACGATTGAGCAAAGGTCTAGAGACTCTCTTCACGACGAAT
GAACCAGTGGTTGTCAGCGGTCCCCAAATTACCTGGACTACTCTTGTACT
CGCTGCGGGCCCCAGATATGATGGTTCAGCCAATCTGGTGATAGGTGATT
CCCACGTTCATCTTTCGGAAATTGACCATCAACTAATCAGATCTGGCCGA
CCATGGCGATTTCTTTCTCCATGGCCAGGAAGCGATGATTGTCAAAAGGA
GTTGGAGGCGATCAAGAAGACGCGAGAGGAGCTCTCCAATATGAGAGACA
AATTAGGAAGAGGTCAGAGATGTCCTGAAGCACACAATCTACTCATACTT
AACTTCAGAAACAGTTTTGGACGAGATGTCTGCGTTAGACCGGGAGCTTG
GCCACCGCCATATTATTGTTGCCCGACTTCTCAAGGATCAAGGACTGGAT
ATGCAGAAGTCAGGACCGGGCTGTGTCTACATGAACACAGGAGCTACGGA
CCATGGGAGTAGTCTAGGGGTCACGGTTCCGGAGGCTGTTGGGAGTGCAG
CTCCAGACAATGGAACCCCTTTCTTCGCAGCCAGTACAAAGCGTGGGTTT
GAGCAAGCAGCTCAGCTGAAGCCATTTGCTGATAGCCAGCAAGAACCACC
AAACTTGGCTTCCGCTAGTGAGAGCGAGGGAGTCAGCGGGGTGGAACCGG
TAGCTCAAGAGGCAGACCTTCGAACACCTGCATCACATACAGAGCCATTT
ATTCAATGTCTAAGCGAGTAAGCCTCATGCGAAATACCCACTGCACATTC
TGCCTCTGACGGAGAATAAGTGTGCTCGAGGATCCAAAGTTCAGGGAGGT
GATGTGCTGGTCGCCGGATGGTCATTCTTTCTCAATTCCCGCGGAGAATA
ATTTTCCTTCCGAGCTGCTTGACAGATTCGAGACGGAAAGCTTTCAATCT
TTGGTTCGGCGATTGTATTACTATGGATTCCACAAAGGCGGTGGGACCTG
GAGGCACGACCTATTTGCTCGAGGCGTATCGAGTTCCATCTGCCCAGGTC
GGCGCAGCAGCAATTCCCCCCTAACTGGTACCAGTCGCCGATCGGGACCT
CGCTACAAAATCATCCGAAGCCATAGAGGTCGTTAAAAACAATGACATTC
CGGTATTGGCCTCCCAATTTGAACTCGGAGAGCTTCATTGCTTGCTGAAC
TGGGCAGTCTTGAGCTAGTATCATCATAGTCGGCCGGACTTGCCTGGCCC
AATATTCATGATATAATGGAAGCGGAGTTGGAAGACAAATATGAAAGTTG
CTTAAGAATGTCGAAATGTCCGGCCAAATGAACATACCAACACTAGTACA
CATGAGAAATTGTCGAGAATGTCGCAGCTTGTCATCTGTTCGGACGGTCG
GAGACAACATGCTGAGGTAGGAACCCTTGGTCCGGGTCTCATGTTGACGA
CGGCCAGACCTTGGTTGATGTCAGCGATGGTTGACCTGGCATTTGGCTGA
GTCATTACCCCTTCGGAGTTCAAGAATGCTGGAGGAGGCCAGAATTTGCT
GCCACTCAGCGGGGATCAGTCAAAGTGGCTTGATTGGAATTGCAGGAGGG
GCTCTAGGAGGGGAAACGCTACCAGCATTGATGCGGATCTACTAGCTCGT
CTAATTGGGCACAACGGCTAAGTATGCGCATCACTTATTGCTTGCTTAAT
AGATCGAATAGTTATGTGATCATGACCGCGACCGATGATGAAGTGTTCTC
TGTAAGTTATTGGTTGGCCTCAGCGGCCGTAGCCTAGATAGCATCAATAG
GATCACGCTTTTGCTCCGCGCTTCC
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Coding sequence (CDS) from alignment at JC14F:11339..13413+

>KJC3_000040-T1 ID=KJC3_000040-T1|Name=KJC3_000040-T1|organism=Aspergillus niger KJC3|type=CDS|length=4896bp|location=Sequence derived from alignment at JC14F:11339..13413+ (Aspergillus niger KJC3)
ATGACTGAGAAAGTTCACATCATGGATTGGGAAGCCACAGCTACCAGCCA
CGGATCTACACAGACCGTTAAGCAGGTTTTGCAGGTCGATGATGCGATTG
TCTTTGCAGACCCCCAACGCATAGAGGATCTACGCTCTCTTGAGCTCGCC
GATAGCCCCTTAAACGAGATCTCGAGTAGGCTGGAAGAATATCACTCCGT
GCTCAATTCTGGCTCTAGCATTGCTCTCGGTCGTGGTGACGCGCTATTCA
GCACACGATTGAGCAAAGGTCTAGAGACTCTCTTCACGACGAATGAACCA
GTGGTTGTCAGCGGTCCCCAAATTACCTGGACTACTCTTGTACTCGCTGC
GGGCCCCAGATATGATGGTTCAGCCAATCTGGTGATAGGTGATTCCCACG
TTCATCTTTCGGAAATTGACCATCAACTAATCAGATCTGGCCGACCATGG
CGATTTCTTTCTCCATGGCCAGGAAGCGATGATTGTCAAAAGGAGTTGGA
GGCGATCAAGAAGACGCGAGAGGAGCTCTCCAATATGAGAGACAAATTAG
GAAGAGTTTTGGACGAGATGTCTGCGTTAGACCGGGAGCTTGGCCACCGC
CATATTATTGTTGCCCGACTTCTCAAGGATCAAGGACTGGATATGCAGAA
GTCAGGACCGGGCTGTGTCTACATGAACACAGGAGCTACGGACCATGGGA
GTAGTCTAGGGGTCACGGTTCCGGAGGCTGTTGGGAGTGCAGCTCCAGAC
AATGGAACCCCTTTCTTCGCAGCCAGTACAAAGCAACCACCAAACTTGGC
TTCCGCTAGTGAGAGCGAGGGAGTCAGCGGGGTGGAACCGGTAGCTCAAG
AGGCAGACCTTCGAACACCTGCATCACATACAGAGCCATTTATTCAATGT
CTAAGCGATGTGCTCGAGGATCCAAAGTTCAGGGAGGTGATGTGCTGGTC
GCCGGATGGTCATTCTTTCTCAATTCCCGCGGAGAATAATTTTCCTTCCG
AGCTGCTTGACAGATTCGAGACGGAAAGCTTTCAATCTTTGGTTCGGCGA
TTGTATTACTATGGATTCCACAAAGGCGGTGGGACCTGGAGGCACGACCT
ATTTGCTCGAGGCGTATCGAGTTCCATCTGCCCAGGTCGGCGCAGCAGCA
ATTCCCCCCTAACTGGTACCAGTCGCCGATCGGGACCTCGCTACAAAATC
ATCCGAAGCCATAGAGGTCGTTAAATGACTGAGAAAGTTCACATCATGGA
TTGGGAAGCCACAGCTACCAGCCACGGATCTACACAGACCGTTAAGCAGG
TTTTGCAGGTCGATGATGCGATTGTCTTTGCAGACCCCCAACGCATAGAG
GATCTACGCTCTCTTGAGCTCGCCGATAGCCCCTTAAACGAGATCTCGAG
TAGGCTGGAAGAATATCACTCCGTGCTCAATTCTGGCTCTAGCATTGCTC
TCGGTCGTGGTGACGCGCTATTCAGCACACGATTGAGCAAAGGTCTAGAG
ACTCTCTTCACGACGAATGAACCAGTGGTTGTCAGCGGTCCCCAAATTAC
CTGGACTACTCTTGTACTCGCTGCGGGCCCCAGATATGATGGTTCAGCCA
ATCTGGTGATAGGTGATTCCCACGTTCATCTTTCGGAAATTGACCATCAA
CTAATCAGATCTGGCCGACCATGGCGATTTCTTTCTCCATGGCCAGGAAG
CGATGATTGTCAAAAGGAGTTGGAGGCGATCAAGAAGACGCGAGAGGAGC
TCTCCAATATGAGAGACAAATTAGGAAGAGTTTTGGACGAGATGTCTGCG
TTAGACCGGGAGCTTGGCCACCGCCATATTATTGTTGCCCGACTTCTCAA
GGATCAAGGACTGGATATGCAGAAGTCAGGACCGGGCTGTGTCTACATGA
ACACAGGAGCTACGGACCATGGGAGTAGTCTAGGGGTCACGGTTCCGGAG
GCTGTTGGGAGTGCAGCTCCAGACAATGGAACCCCTTTCTTCGCAGCCAG
TACAAAGCAACCACCAAACTTGGCTTCCGCTAGTGAGAGCGAGGGAGTCA
GCGGGGTGGAACCGGTAGCTCAAGAGGCAGACCTTCGAACACCTGCATCA
CATACAGAGCCATTTATTCAATGTCTAAGCGATGTGCTCGAGGATCCAAA
GTTCAGGGAGGTGATGTGCTGGTCGCCGGATGGTCATTCTTTCTCAATTC
CCGCGGAGAATAATTTTCCTTCCGAGCTGCTTGACAGATTCGAGACGGAA
AGCTTTCAATCTTTGGTTCGGCGATTGTATTACTATGGATTCCACAAAGG
CGGTGGGACCTGGAGGCACGACCTATTTGCTCGAGGCGTATCGAGTTCCA
TCTGCCCAGGTCGGCGCAGCAGCAATTCCCCCCTAACTGGTACCAGTCGC
CGATCGGGACCTCGCTACAAAATCATCCGAAGCCATAGAGGTCGTTAAAT
GACTGAGAAAGTTCACATCATGGATTGGGAAGCCACAGCTACCAGCCACG
GATCTACACAGACCGTTAAGCAGGTTTTGCAGGTCGATGATGCGATTGTC
TTTGCAGACCCCCAACGCATAGAGGATCTACGCTCTCTTGAGCTCGCCGA
TAGCCCCTTAAACGAGATCTCGAGTAGGCTGGAAGAATATCACTCCGTGC
TCAATTCTGGCTCTAGCATTGCTCTCGGTCGTGGTGACGCGCTATTCAGC
ACACGATTGAGCAAAGGTCTAGAGACTCTCTTCACGACGAATGAACCAGT
GGTTGTCAGCGGTCCCCAAATTACCTGGACTACTCTTGTACTCGCTGCGG
GCCCCAGATATGATGGTTCAGCCAATCTGGTGATAGGTGATTCCCACGTT
CATCTTTCGGAAATTGACCATCAACTAATCAGATCTGGCCGACCATGGCG
ATTTCTTTCTCCATGGCCAGGAAGCGATGATTGTCAAAAGGAGTTGGAGG
CGATCAAGAAGACGCGAGAGGAGCTCTCCAATATGAGAGACAAATTAGGA
AGAGTTTTGGACGAGATGTCTGCGTTAGACCGGGAGCTTGGCCACCGCCA
TATTATTGTTGCCCGACTTCTCAAGGATCAAGGACTGGATATGCAGAAGT
CAGGACCGGGCTGTGTCTACATGAACACAGGAGCTACGGACCATGGGAGT
AGTCTAGGGGTCACGGTTCCGGAGGCTGTTGGGAGTGCAGCTCCAGACAA
TGGAACCCCTTTCTTCGCAGCCAGTACAAAGCAACCACCAAACTTGGCTT
CCGCTAGTGAGAGCGAGGGAGTCAGCGGGGTGGAACCGGTAGCTCAAGAG
GCAGACCTTCGAACACCTGCATCACATACAGAGCCATTTATTCAATGTCT
AAGCGATGTGCTCGAGGATCCAAAGTTCAGGGAGGTGATGTGCTGGTCGC
CGGATGGTCATTCTTTCTCAATTCCCGCGGAGAATAATTTTCCTTCCGAG
CTGCTTGACAGATTCGAGACGGAAAGCTTTCAATCTTTGGTTCGGCGATT
GTATTACTATGGATTCCACAAAGGCGGTGGGACCTGGAGGCACGACCTAT
TTGCTCGAGGCGTATCGAGTTCCATCTGCCCAGGTCGGCGCAGCAGCAAT
TCCCCCCTAACTGGTACCAGTCGCCGATCGGGACCTCGCTACAAAATCAT
CCGAAGCCATAGAGGTCGTTAAATGACTGAGAAAGTTCACATCATGGATT
GGGAAGCCACAGCTACCAGCCACGGATCTACACAGACCGTTAAGCAGGTT
TTGCAGGTCGATGATGCGATTGTCTTTGCAGACCCCCAACGCATAGAGGA
TCTACGCTCTCTTGAGCTCGCCGATAGCCCCTTAAACGAGATCTCGAGTA
GGCTGGAAGAATATCACTCCGTGCTCAATTCTGGCTCTAGCATTGCTCTC
GGTCGTGGTGACGCGCTATTCAGCACACGATTGAGCAAAGGTCTAGAGAC
TCTCTTCACGACGAATGAACCAGTGGTTGTCAGCGGTCCCCAAATTACCT
GGACTACTCTTGTACTCGCTGCGGGCCCCAGATATGATGGTTCAGCCAAT
CTGGTGATAGGTGATTCCCACGTTCATCTTTCGGAAATTGACCATCAACT
AATCAGATCTGGCCGACCATGGCGATTTCTTTCTCCATGGCCAGGAAGCG
ATGATTGTCAAAAGGAGTTGGAGGCGATCAAGAAGACGCGAGAGGAGCTC
TCCAATATGAGAGACAAATTAGGAAGAGTTTTGGACGAGATGTCTGCGTT
AGACCGGGAGCTTGGCCACCGCCATATTATTGTTGCCCGACTTCTCAAGG
ATCAAGGACTGGATATGCAGAAGTCAGGACCGGGCTGTGTCTACATGAAC
ACAGGAGCTACGGACCATGGGAGTAGTCTAGGGGTCACGGTTCCGGAGGC
TGTTGGGAGTGCAGCTCCAGACAATGGAACCCCTTTCTTCGCAGCCAGTA
CAAAGCAACCACCAAACTTGGCTTCCGCTAGTGAGAGCGAGGGAGTCAGC
GGGGTGGAACCGGTAGCTCAAGAGGCAGACCTTCGAACACCTGCATCACA
TACAGAGCCATTTATTCAATGTCTAAGCGATGTGCTCGAGGATCCAAAGT
TCAGGGAGGTGATGTGCTGGTCGCCGGATGGTCATTCTTTCTCAATTCCC
GCGGAGAATAATTTTCCTTCCGAGCTGCTTGACAGATTCGAGACGGAAAG
CTTTCAATCTTTGGTTCGGCGATTGTATTACTATGGATTCCACAAAGGCG
GTGGGACCTGGAGGCACGACCTATTTGCTCGAGGCGTATCGAGTTCCATC
TGCCCAGGTCGGCGCAGCAGCAATTCCCCCCTAACTGGTACCAGTCGCCG
ATCGGGACCTCGCTACAAAATCATCCGAAGCCATAGAGGTCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000040KJC3_000040Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000040-T1KJC3_000040-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000040-T1.utr5p1KJC3_000040-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000040-T1.exon1KJC3_000040-T1.exon1Aspergillus niger KJC3exon
KJC3_000040-T1.exon2KJC3_000040-T1.exon2Aspergillus niger KJC3exon
KJC3_000040-T1.exon3KJC3_000040-T1.exon3Aspergillus niger KJC3exon
KJC3_000040-T1.exon4KJC3_000040-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000040-T1.cdsKJC3_000040-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000040-T1.utr3p1KJC3_000040-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR000232
DBxrefPFAM:PF00447
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC14FsupercontigJC14F:11339..13413 +
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