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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC14F:19838..21447- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000043-T1 ID=KJC3_000043-T1|Name=KJC3_000043-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1610bp|location=Sequence derived from alignment at JC14F:19838..21447- (Aspergillus niger KJC3)
GGTGGACTGGCAAGCGACACTCATAAGAGTTGTGAGACCATCACCTGGAT
TCAGATTAAGACTGCATTTTTGGCCCCTACGACAGGGGAAGAAAAGAAAA
CAGGAGCCTAGACGAAGGACAAGCGAGATAGCTCTACCTCACCCGGGCCG
TCCCACCTTCATTAGCTCCCGGTCCAGCGAGGCTGAGATTCAGGGGACTG
AGAGCCTCGAAGATTGCCCCCAATACCATCGACAGTCTGGCCGCCATTCA
GTCGGGCCCAACTGAACATGATCCTATACAGCCCCCAGAAACGGTTCGGC
CGGTTGGTTCTTTATGTGCTTGGGGTGTTTGTGATCCTTCTCATTCTATG
GCCGTTGCCCTATGCAAGGGTCACGGCGCGAAAGGGAGCGAGTTCCTGGA
CACAGCTCGATGCGATCAAGAACGAGACGCTAGGGGTATGCTCTCTCTCA
TAAGACTAATGAAACCACTCTCTTTCGGCGTTCACCCTGACAGTTTCCAA
TACAGGTCCAGAAAATATATGCTATCAATCTGCCTGGCAGGGTTGACAAG
CGCGACAACCTCATTCTCGGTTCGTCGGTGAGTGACTTCAGCATCGACTG
GGTCGACGGTGTCACTACTGACGAACTTGATCTCAAAACGTACCCTTATG
TGAGTTCTTGAATTTGTACCACATTGAATGTCCACCAATATTGCCCCAGA
ACTGGAATTACGACCACAAGCCAACCGAGTATGCCGCTCGACGGGCCCAT
GTGAATGCCATGCAACGGTAGGAACATTCCAACCCCCTCCCGTGTCATAT
TCGGACTAATCGTGCCTCGCCAGGATTGTTAAGGAGAGAATAAGAAGCGC
AATTGTCATGGAGGATGATGTCGATTGGGATGTAACCCTTAAAACCCAGC
TACAAAGCTTTGCCCTCGGACTTCGAATCCTCCAGGGAGCGGAACAAAAA
GTCACCGCTTCACCGTATGGTGATGACTGGGATATCATCTGGCTTGGCCA
CTGTGGCGTAGAGTGTCGAATCGACGCGCCATTTTTTATGAGCCATAACG
ATCCCACTGTCCTTCCACCGCGTCATTTCCTACCGTATTGGCGCGATCCG
CCTCCGGTCGAGATACCGGACTACGCCCGTTTAACCTGCGCCGTAAACGA
TGGCGTTTGCTCGATTGTCTACGCTGTAAGCTACCATGGAGCTCAGAAAA
TCCTGGCCGCTCTCTCTGTGAACCCGACGGGTATTGCAGAGAAGATTGAC
ATTGGGGCTCAATTCGACGTGTCGCTCGGTCGCATGTGTGGCAGTGGCTT
TCTACAGTGCTTTGCCTCCTTTCCGTCTCTCACAGGTGGATATATTCCTG
CTGGACCTTCTTCTAAGGGTTCTGATATCCACGGCGGGAATGAAGACATC
CATCCCATCTCCAGCCATGGGGTCATGTACAGTACCATGCTGAATATCAA
CCGCATACTGAACGGGGAGGGCACAATTACATCCAATTGGGATGACGCTC
CAGCTCCAGTCATTAGTCCGGCAAACATTTCGGTGACTGGAGGAGAGATG
CGCATGCTGAAGGATGACGGCGTTCATACTCTTGCGGTTGTGCACTCGTA
AAGAAGAAAG back to topCoding sequence (CDS) from alignment at JC14F:19838..21447- >KJC3_000043-T1 ID=KJC3_000043-T1|Name=KJC3_000043-T1|organism=Aspergillus niger KJC3|type=CDS|length=4632bp|location=Sequence derived from alignment at JC14F:19838..21447- (Aspergillus niger KJC3)
GATTGTTAAGGAGAGAATAAGAAGCGCAATTGTCATGGAGGATGATGTCG
ATTGGGATGTAACCCTTAAAACCCAGCTACAAAGCTTTGCCCTCGGACTT
CGAATCCTCCAGGGAGCGGAACAAAAAGTCACCGCTTCACCGTATGGTGA
TGACTGGGATATCATCTGGCTTGGCCACTGTGGCGTAGAGTGTCGAATCG
ACGCGCCATTTTTTATGAGCCATAACGATCCCACTGTCCTTCCACCGCGT
CATTTCCTACCGTATTGGCGCGATCCGCCTCCGGTCGAGATACCGGACTA
CGCCCGTTTAACCTGCGCCGTAAACGATGGCGTTTGCTCGATTGTCTACG
CTGTAAGCTACCATGGAGCTCAGAAAATCCTGGCCGCTCTCTCTGTGAAC
CCGACGGGTATTGCAGAGAAGATTGACATTGGGGCTCAATTCGACGTGTC
GCTCGGTCGCATGTGTGGCAGTGGCTTTCTACAGTGCTTTGCCTCCTTTC
CGTCTCTCACAGGTGGATATATTCCTGCTGGACCTTCTTCTAAGGGTTCT
GATATCCACGGCGGGAATGAAGACATCCATCCCATCTCCAGCCATGGGGT
CATGTACAGTACCATGCTGAATATCAACCGCATACTGAACGGGGAGGGCA
CAATTACATCCAATTGGGATGACGCTCCAGCTCCAGTCATTAGTCCGGCA
AACATTTCGGTGACTGGAGGAGAGATGCGCATGCTGAAGGATGACGGCGT
TCATACTCTTGCGGTTGTGCACTCGTAAAACTGGAATTACGACCACAAGC
CAACCGAGTATGCCGCTCGACGGGCCCATGTGAATGCCATGCAACGGTCC
AGAAAATATATGCTATCAATCTGCCTGGCAGGGTTGACAAGCGCGACAAC
CTCATTCTCGGTTCGTCGGTGAGTGACTTCAGCATCGACTGGGTCGACGG
TGTCACTACTGACGAACTTGATCTCAAAACGTACCCTTATATGATCCTAT
ACAGCCCCCAGAAACGGTTCGGCCGGTTGGTTCTTTATGTGCTTGGGGTG
TTTGTGATCCTTCTCATTCTATGGCCGTTGCCCTATGCAAGGGTCACGGC
GCGAAAGGGAGCGAGTTCCTGGACACAGCTCGATGCGATCAAGAACGAGA
CGCTAGGGGATTGTTAAGGAGAGAATAAGAAGCGCAATTGTCATGGAGGA
TGATGTCGATTGGGATGTAACCCTTAAAACCCAGCTACAAAGCTTTGCCC
TCGGACTTCGAATCCTCCAGGGAGCGGAACAAAAAGTCACCGCTTCACCG
TATGGTGATGACTGGGATATCATCTGGCTTGGCCACTGTGGCGTAGAGTG
TCGAATCGACGCGCCATTTTTTATGAGCCATAACGATCCCACTGTCCTTC
CACCGCGTCATTTCCTACCGTATTGGCGCGATCCGCCTCCGGTCGAGATA
CCGGACTACGCCCGTTTAACCTGCGCCGTAAACGATGGCGTTTGCTCGAT
TGTCTACGCTGTAAGCTACCATGGAGCTCAGAAAATCCTGGCCGCTCTCT
CTGTGAACCCGACGGGTATTGCAGAGAAGATTGACATTGGGGCTCAATTC
GACGTGTCGCTCGGTCGCATGTGTGGCAGTGGCTTTCTACAGTGCTTTGC
CTCCTTTCCGTCTCTCACAGGTGGATATATTCCTGCTGGACCTTCTTCTA
AGGGTTCTGATATCCACGGCGGGAATGAAGACATCCATCCCATCTCCAGC
CATGGGGTCATGTACAGTACCATGCTGAATATCAACCGCATACTGAACGG
GGAGGGCACAATTACATCCAATTGGGATGACGCTCCAGCTCCAGTCATTA
GTCCGGCAAACATTTCGGTGACTGGAGGAGAGATGCGCATGCTGAAGGAT
GACGGCGTTCATACTCTTGCGGTTGTGCACTCGTAAAACTGGAATTACGA
CCACAAGCCAACCGAGTATGCCGCTCGACGGGCCCATGTGAATGCCATGC
AACGGTCCAGAAAATATATGCTATCAATCTGCCTGGCAGGGTTGACAAGC
GCGACAACCTCATTCTCGGTTCGTCGGTGAGTGACTTCAGCATCGACTGG
GTCGACGGTGTCACTACTGACGAACTTGATCTCAAAACGTACCCTTATAT
GATCCTATACAGCCCCCAGAAACGGTTCGGCCGGTTGGTTCTTTATGTGC
TTGGGGTGTTTGTGATCCTTCTCATTCTATGGCCGTTGCCCTATGCAAGG
GTCACGGCGCGAAAGGGAGCGAGTTCCTGGACACAGCTCGATGCGATCAA
GAACGAGACGCTAGGGGATTGTTAAGGAGAGAATAAGAAGCGCAATTGTC
ATGGAGGATGATGTCGATTGGGATGTAACCCTTAAAACCCAGCTACAAAG
CTTTGCCCTCGGACTTCGAATCCTCCAGGGAGCGGAACAAAAAGTCACCG
CTTCACCGTATGGTGATGACTGGGATATCATCTGGCTTGGCCACTGTGGC
GTAGAGTGTCGAATCGACGCGCCATTTTTTATGAGCCATAACGATCCCAC
TGTCCTTCCACCGCGTCATTTCCTACCGTATTGGCGCGATCCGCCTCCGG
TCGAGATACCGGACTACGCCCGTTTAACCTGCGCCGTAAACGATGGCGTT
TGCTCGATTGTCTACGCTGTAAGCTACCATGGAGCTCAGAAAATCCTGGC
CGCTCTCTCTGTGAACCCGACGGGTATTGCAGAGAAGATTGACATTGGGG
CTCAATTCGACGTGTCGCTCGGTCGCATGTGTGGCAGTGGCTTTCTACAG
TGCTTTGCCTCCTTTCCGTCTCTCACAGGTGGATATATTCCTGCTGGACC
TTCTTCTAAGGGTTCTGATATCCACGGCGGGAATGAAGACATCCATCCCA
TCTCCAGCCATGGGGTCATGTACAGTACCATGCTGAATATCAACCGCATA
CTGAACGGGGAGGGCACAATTACATCCAATTGGGATGACGCTCCAGCTCC
AGTCATTAGTCCGGCAAACATTTCGGTGACTGGAGGAGAGATGCGCATGC
TGAAGGATGACGGCGTTCATACTCTTGCGGTTGTGCACTCGTAAAACTGG
AATTACGACCACAAGCCAACCGAGTATGCCGCTCGACGGGCCCATGTGAA
TGCCATGCAACGGTCCAGAAAATATATGCTATCAATCTGCCTGGCAGGGT
TGACAAGCGCGACAACCTCATTCTCGGTTCGTCGGTGAGTGACTTCAGCA
TCGACTGGGTCGACGGTGTCACTACTGACGAACTTGATCTCAAAACGTAC
CCTTATATGATCCTATACAGCCCCCAGAAACGGTTCGGCCGGTTGGTTCT
TTATGTGCTTGGGGTGTTTGTGATCCTTCTCATTCTATGGCCGTTGCCCT
ATGCAAGGGTCACGGCGCGAAAGGGAGCGAGTTCCTGGACACAGCTCGAT
GCGATCAAGAACGAGACGCTAGGGGATTGTTAAGGAGAGAATAAGAAGCG
CAATTGTCATGGAGGATGATGTCGATTGGGATGTAACCCTTAAAACCCAG
CTACAAAGCTTTGCCCTCGGACTTCGAATCCTCCAGGGAGCGGAACAAAA
AGTCACCGCTTCACCGTATGGTGATGACTGGGATATCATCTGGCTTGGCC
ACTGTGGCGTAGAGTGTCGAATCGACGCGCCATTTTTTATGAGCCATAAC
GATCCCACTGTCCTTCCACCGCGTCATTTCCTACCGTATTGGCGCGATCC
GCCTCCGGTCGAGATACCGGACTACGCCCGTTTAACCTGCGCCGTAAACG
ATGGCGTTTGCTCGATTGTCTACGCTGTAAGCTACCATGGAGCTCAGAAA
ATCCTGGCCGCTCTCTCTGTGAACCCGACGGGTATTGCAGAGAAGATTGA
CATTGGGGCTCAATTCGACGTGTCGCTCGGTCGCATGTGTGGCAGTGGCT
TTCTACAGTGCTTTGCCTCCTTTCCGTCTCTCACAGGTGGATATATTCCT
GCTGGACCTTCTTCTAAGGGTTCTGATATCCACGGCGGGAATGAAGACAT
CCATCCCATCTCCAGCCATGGGGTCATGTACAGTACCATGCTGAATATCA
ACCGCATACTGAACGGGGAGGGCACAATTACATCCAATTGGGATGACGCT
CCAGCTCCAGTCATTAGTCCGGCAAACATTTCGGTGACTGGAGGAGAGAT
GCGCATGCTGAAGGATGACGGCGTTCATACTCTTGCGGTTGTGCACTCGT
AAAACTGGAATTACGACCACAAGCCAACCGAGTATGCCGCTCGACGGGCC
CATGTGAATGCCATGCAACGGTCCAGAAAATATATGCTATCAATCTGCCT
GGCAGGGTTGACAAGCGCGACAACCTCATTCTCGGTTCGTCGGTGAGTGA
CTTCAGCATCGACTGGGTCGACGGTGTCACTACTGACGAACTTGATCTCA
AAACGTACCCTTATATGATCCTATACAGCCCCCAGAAACGGTTCGGCCGG
TTGGTTCTTTATGTGCTTGGGGTGTTTGTGATCCTTCTCATTCTATGGCC
GTTGCCCTATGCAAGGGTCACGGCGCGAAAGGGAGCGAGTTCCTGGACAC
AGCTCGATGCGATCAAGAACGAGACGCTAGGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000043-T1.utr3p1 | KJC3_000043-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000043-T1.utr5p1 | KJC3_000043-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT25 |
| DBxref | InterPro:IPR002654 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| JC14F | supercontig | JC14F:19838..21447 - |
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