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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC14F:77927..79304- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000046-T1 ID=KJC3_000046-T1|Name=KJC3_000046-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1378bp|location=Sequence derived from alignment at JC14F:77927..79304- (Aspergillus niger KJC3)
ATCGAACAAGACCCCGTCTACCTTTGACTCTCGTGGGAGGGAGCATTTGA
GTCAGAACCGTCGAACCCCTGTTCGATAGGAGAAAGTACCGTTGGACAGG
TTTGCACTAATGGGTTGCTTTGACAGGGGTCCTCACGTATTGTGAGATGA
ACCATATCTCCGGGTCAACGACCGTGTGGGAAGATGTTTTCCCCGGCTTT
ATCATTCCGTCTTTTCAGTGACGGCTTGTTCCTAACTGAGCTTGGAGACA
TCTCGTACTGGAACCCCCTTCTTGAGTCCCGACTTTAGCAAATCAAGAGA
CAATGCAGGCTGAACTGATGCGAGAAATCGAGGACAAAACGGTGACTATA
GCTACACTGGATGTTGTGGATATCACTAAGTTAATCGCAGCGGGCTTTCA
ACCGAGCTCTGGATGAACTGCATAAAAACCAGGGAAGTCGGGAAAGTGTG
ACCGAATCTGTGGTAACAGATGATTCTTCATGATATTAGATCAATTCCCA
GACTAAACGTTCTCTAGCTCGAGTTGATTAACGTGGTTTGGCGGACATCA
GCACAAGGAGGGAGTGATTCGACCAATCTTCGCCAGGTTATCCGTTATGT
CTCAAACTTACTTCGCCCCGGCGACCAGGACGAGTTGCTGCCATTCCGCT
CGAAGCCCTCGCCTACGTACAATAGCGTTGACATACCGTCGTCCGCTAAT
CCATCATATATAGAGAGAGAAGGCGCGGAGCACACGACCGCACGCGCAAA
GAGCCTTCTAGATCGAGTGGATGGTCTTCAGACAGGCCAAGTGGAGACAG
ATTTCCTGAACATGGCTATTTCACCTAGCGACCTTGCCGCTATCTTTCCA
GAAGTCTTCTATGGGGATATGTTAAATAATGATATGGAATTGGCGCCTCA
AATCTCTCAATCTCAGGGTTTCGAGACATCGATGGCAATGGTTGACACTA
TGGAAGACTCGGGTCTGCACTCACTTACGCCAGGAGATGATTCTTCGCTG
CCATCACAGTTGACTCCTCAATTGGACAACAGTACGAGCGTGGACTTACA
ACCATATACGTCGACTGAGTTCTGGGAGGCATGGTTGGCTGAGTTAGTTC
CAATGGCCTGTCCTGACTCGCCCTCAGGTCTAGGGGCTCCCATTGCAACC
CCAAACAATGACTTTTACCACAGCTTGAATGGGCAGGTGCCTGTAACACC
TGATTTGCATGGTCATCTTAATGAGAGCGAGGTTCCCGCAGGACTATTTG
TTTCCAGTACCCCAACGTCAACCAGTATTGCGATCAATGTGGACGACATT
GCCACAGGCCTAGAGAACAAGGATTCAGAGCCCGAAGTGATTGAGCAGAT
ATTCAGATTGGATAGCTTTCCCGCATAG back to topCoding sequence (CDS) from alignment at JC14F:77927..79304- >KJC3_000046-T1 ID=KJC3_000046-T1|Name=KJC3_000046-T1|organism=Aspergillus niger KJC3|type=CDS|length=2916bp|location=Sequence derived from alignment at JC14F:77927..79304- (Aspergillus niger KJC3)
CTCGAGTTGATTAACGTGGTTTGGCGGACATCAGCACAAGGAGGGAGTGA
TTCGACCAATCTTCGCCAGGTTATCCGTTATGTCTCAAACTTACTTCGCC
CCGGCGACCAGGACGAGTTGCTGCCATTCCGCTCGAAGCCCTCGCCTACG
TACAATAGCGTTGACATACCGTCGTCCGCTAATCCATCATATATAGAGAG
AGAAGGCGCGGAGCACACGACCGCACGCGCAAAGAGCCTTCTAGATCGAG
TGGATGGTCTTCAGACAGGCCAAGTGGAGACAGATTTCCTGAACATGGCT
ATTTCACCTAGCGACCTTGCCGCTATCTTTCCAGAAGTCTTCTATGGGGA
TATGTTAAATAATGATATGGAATTGGCGCCTCAAATCTCTCAATCTCAGG
GTTTCGAGACATCGATGGCAATGGTTGACACTATGGAAGACTCGGGTCTG
CACTCACTTACGCCAGGAGATGATTCTTCGCTGCCATCACAGTTGACTCC
TCAATTGGACAACAGTACGAGCGTGGACTTACAACCATATACGTCGACTG
AGTTCTGGGAGGCATGGTTGGCTGAGTTAGTTCCAATGGCCTGTCCTGAC
TCGCCCTCAGGTCTAGGGGCTCCCATTGCAACCCCAAACAATGACTTTTA
CCACAGCTTGAATGGGCAGGTGCCTGTAACACCTGATTTGCATGGTCATC
TTAATGAGAGCGAGGTTCCCGCAGGACTATTTGTTTCCAGTACCCCAACG
TCAACCAGTATTGCGATCAATGTGGACGACATTGCCACAGGCCTAGAGAA
CAAGGATTCAGAGCCCGAAGTGATTGAGCAGATATTCAGATTGGATAGCT
TTCCCGCATAGCGGGCTTTCAACCGAGCTCTGGATGAACTGCATAAAAAC
CAGGGAAGTCGGGAAAGTGTGACCGAATCTGTGATGCAGGCTGAACTGAT
GCGAGAAATCGAGGACAAAACGCTCGAGTTGATTAACGTGGTTTGGCGGA
CATCAGCACAAGGAGGGAGTGATTCGACCAATCTTCGCCAGGTTATCCGT
TATGTCTCAAACTTACTTCGCCCCGGCGACCAGGACGAGTTGCTGCCATT
CCGCTCGAAGCCCTCGCCTACGTACAATAGCGTTGACATACCGTCGTCCG
CTAATCCATCATATATAGAGAGAGAAGGCGCGGAGCACACGACCGCACGC
GCAAAGAGCCTTCTAGATCGAGTGGATGGTCTTCAGACAGGCCAAGTGGA
GACAGATTTCCTGAACATGGCTATTTCACCTAGCGACCTTGCCGCTATCT
TTCCAGAAGTCTTCTATGGGGATATGTTAAATAATGATATGGAATTGGCG
CCTCAAATCTCTCAATCTCAGGGTTTCGAGACATCGATGGCAATGGTTGA
CACTATGGAAGACTCGGGTCTGCACTCACTTACGCCAGGAGATGATTCTT
CGCTGCCATCACAGTTGACTCCTCAATTGGACAACAGTACGAGCGTGGAC
TTACAACCATATACGTCGACTGAGTTCTGGGAGGCATGGTTGGCTGAGTT
AGTTCCAATGGCCTGTCCTGACTCGCCCTCAGGTCTAGGGGCTCCCATTG
CAACCCCAAACAATGACTTTTACCACAGCTTGAATGGGCAGGTGCCTGTA
ACACCTGATTTGCATGGTCATCTTAATGAGAGCGAGGTTCCCGCAGGACT
ATTTGTTTCCAGTACCCCAACGTCAACCAGTATTGCGATCAATGTGGACG
ACATTGCCACAGGCCTAGAGAACAAGGATTCAGAGCCCGAAGTGATTGAG
CAGATATTCAGATTGGATAGCTTTCCCGCATAGCGGGCTTTCAACCGAGC
TCTGGATGAACTGCATAAAAACCAGGGAAGTCGGGAAAGTGTGACCGAAT
CTGTGATGCAGGCTGAACTGATGCGAGAAATCGAGGACAAAACGCTCGAG
TTGATTAACGTGGTTTGGCGGACATCAGCACAAGGAGGGAGTGATTCGAC
CAATCTTCGCCAGGTTATCCGTTATGTCTCAAACTTACTTCGCCCCGGCG
ACCAGGACGAGTTGCTGCCATTCCGCTCGAAGCCCTCGCCTACGTACAAT
AGCGTTGACATACCGTCGTCCGCTAATCCATCATATATAGAGAGAGAAGG
CGCGGAGCACACGACCGCACGCGCAAAGAGCCTTCTAGATCGAGTGGATG
GTCTTCAGACAGGCCAAGTGGAGACAGATTTCCTGAACATGGCTATTTCA
CCTAGCGACCTTGCCGCTATCTTTCCAGAAGTCTTCTATGGGGATATGTT
AAATAATGATATGGAATTGGCGCCTCAAATCTCTCAATCTCAGGGTTTCG
AGACATCGATGGCAATGGTTGACACTATGGAAGACTCGGGTCTGCACTCA
CTTACGCCAGGAGATGATTCTTCGCTGCCATCACAGTTGACTCCTCAATT
GGACAACAGTACGAGCGTGGACTTACAACCATATACGTCGACTGAGTTCT
GGGAGGCATGGTTGGCTGAGTTAGTTCCAATGGCCTGTCCTGACTCGCCC
TCAGGTCTAGGGGCTCCCATTGCAACCCCAAACAATGACTTTTACCACAG
CTTGAATGGGCAGGTGCCTGTAACACCTGATTTGCATGGTCATCTTAATG
AGAGCGAGGTTCCCGCAGGACTATTTGTTTCCAGTACCCCAACGTCAACC
AGTATTGCGATCAATGTGGACGACATTGCCACAGGCCTAGAGAACAAGGA
TTCAGAGCCCGAAGTGATTGAGCAGATATTCAGATTGGATAGCTTTCCCG
CATAGCGGGCTTTCAACCGAGCTCTGGATGAACTGCATAAAAACCAGGGA
AGTCGGGAAAGTGTGACCGAATCTGTGATGCAGGCTGAACTGATGCGAGA
AATCGAGGACAAAACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000046-T1.utr5p1 | KJC3_000046-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC14F | supercontig | JC14F:77927..79304 - |
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